RNA–Protein interactions for RNA: ENST00000469400.1

TRAPPC12-216, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-216ENST00000469400 PLA2G4EQ3MJ16 856 aa12.6□□□□□ -0.39
TRAPPC12-216ENST00000469400 BOLA3Q53S33 107 aa12.6□□□□□ -0.39
TRAPPC12-216ENST00000469400 TDRD12Q587J7 1177 aaKnown RBP12.6□□□□□ -0.39
TRAPPC12-216ENST00000469400 ANKRD20A8PQ5CZ79 823 aa12.6□□□□□ -0.39
TRAPPC12-216ENST00000469400 CRYBG3Q68DQ2 2970 aa12.6□□□□□ -0.39
TRAPPC12-216ENST00000469400 ALG1LQ6GMV1 187 aa12.6□□□□□ -0.39
TRAPPC12-216ENST00000469400 PPP1R2P3Q6NXS1 205 aa12.6□□□□□ -0.39
TRAPPC12-216ENST00000469400 IRF2BP2Q7Z5L9 587 aa12.6□□□□□ -0.39
TRAPPC12-216ENST00000469400 ADGRG6Q86SQ4 1221 aa12.6□□□□□ -0.39
TRAPPC12-216ENST00000469400 LRRC49Q8IUZ0 686 aa12.6□□□□□ -0.39
TRAPPC12-216ENST00000469400 SLC41A2Q96JW4 573 aa12.6□□□□□ -0.39
TRAPPC12-216ENST00000469400 FCRL4Q96PJ5 515 aa12.6□□□□□ -0.39
TRAPPC12-216ENST00000469400 RAB33BQ9H082 229 aa12.6□□□□□ -0.39
TRAPPC12-216ENST00000469400 PCDH9Q9HC56 1237 aa12.6□□□□□ -0.39
TRAPPC12-216ENST00000469400 TRIM39Q9HCM9 518 aa12.6□□□□□ -0.39
TRAPPC12-216ENST00000469400 DTLQ9NZJ0 730 aa12.6□□□□□ -0.39
TRAPPC12-216ENST00000469400 SEMA5BQ9P283 1151 aa12.6□□□□□ -0.39
TRAPPC12-216ENST00000469400 MAP10Q9P2G4 905 aa12.6□□□□□ -0.39
TRAPPC12-216ENST00000469400 RPL26L1Q9UNX3 145 aaKnown RBP12.6□□□□□ -0.39
TRAPPC12-216ENST00000469400 FARSAQ9Y285 508 aaKnown RBP12.6□□□□□ -0.39
TRAPPC12-216ENST00000469400 DNAJC16Q9Y2G8 782 aa12.6□□□□□ -0.39
TRAPPC12-216ENST00000469400 PCDHGB7Q9Y5F8 929 aa12.6□□□□□ -0.39
TRAPPC12-216ENST00000469400 GTF3C3Q9Y5Q9 886 aa12.6□□□□□ -0.39
TRAPPC12-216ENST00000469400 CSMD1Q96PZ7 3565 aa12.59□□□□□ -0.39
TRAPPC12-216ENST00000469400 OR52A4PA6NMU1 304 aa12.59□□□□□ -0.39
TRAPPC12-216ENST00000469400 LGALS16A8MUM7 142 aa12.59□□□□□ -0.39
TRAPPC12-216ENST00000469400 GPR89AB7ZAQ6 455 aa12.59□□□□□ -0.39
TRAPPC12-216ENST00000469400 CHUKO15111 745 aa12.59□□□□□ -0.39
TRAPPC12-216ENST00000469400 DPM1O60762 260 aa12.59□□□□□ -0.39
TRAPPC12-216ENST00000469400 SLC25A14O95258 325 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC12-216ENST00000469400 GPR89BP0CG08 455 aa12.59□□□□□ -0.39
TRAPPC12-216ENST00000469400 RARAP10276 462 aa12.59□□□□□ -0.39
TRAPPC12-216ENST00000469400 ZNF7P17097 686 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC12-216ENST00000469400 LPOP22079 712 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC12-216ENST00000469400 CA4P22748 312 aa12.59□□□□□ -0.39
TRAPPC12-216ENST00000469400 CES1P23141 567 aa12.59□□□□□ -0.39
TRAPPC12-216ENST00000469400 VARSP26640 1264 aaKnown RBP12.59□□□□□ -0.39
TRAPPC12-216ENST00000469400 RPL10P27635 214 aaKnown RBP12.59□□□□□ -0.39
TRAPPC12-216ENST00000469400 TNFRSF8P28908 595 aa12.59□□□□□ -0.39
TRAPPC12-216ENST00000469400 PTGIRP43119 386 aa12.59□□□□□ -0.39
TRAPPC12-216ENST00000469400 NIPAL4Q0D2K0 466 aa12.59□□□□□ -0.39
TRAPPC12-216ENST00000469400 QPCTQ16769 361 aa12.59□□□□□ -0.39
TRAPPC12-216ENST00000469400 SLC6A19Q695T7 634 aa12.59□□□□□ -0.39
TRAPPC12-216ENST00000469400 TXNRD3NBQ6F5E7 133 aa12.59□□□□□ -0.39
TRAPPC12-216ENST00000469400 ABRAXAS1Q6UWZ7 409 aa12.59□□□□□ -0.39
TRAPPC12-216ENST00000469400 BPHLQ86WA6 291 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC12-216ENST00000469400 RBMXL3Q8N7X1 1067 aaKnown RBP12.59□□□□□ -0.39
TRAPPC12-216ENST00000469400 SIDT2Q8NBJ9 832 aaKnown RBP12.59□□□□□ -0.39
TRAPPC12-216ENST00000469400 FDCSPQ8NFU4 85 aa12.59□□□□□ -0.39
TRAPPC12-216ENST00000469400 ARRDC2Q8TBH0 407 aa12.59□□□□□ -0.39
TRAPPC12-216ENST00000469400 CCHCR1Q8TD31 782 aa12.59□□□□□ -0.39
TRAPPC12-216ENST00000469400 UBXN4Q92575 508 aa12.59□□□□□ -0.39
TRAPPC12-216ENST00000469400 MAML1Q92585 1016 aa12.59□□□□□ -0.39
TRAPPC12-216ENST00000469400 EID2BQ96D98 161 aa12.59□□□□□ -0.39
TRAPPC12-216ENST00000469400 C19orf60Q96EN9 201 aa12.59□□□□□ -0.39
TRAPPC12-216ENST00000469400 FANCLQ9NW38 375 aa12.59□□□□□ -0.39
TRAPPC12-216ENST00000469400 RBM22Q9NW64 420 aaKnown RBP eCLIP12.59□□□□□ -0.393e-7■■■□□ 14.9
TRAPPC12-216ENST00000469400 TTLL3Q9Y4R7 772 aa12.59□□□□□ -0.39
TRAPPC12-216ENST00000469400 ZNF106Q9H2Y7 1883 aaKnown RBP12.59□□□□□ -0.39
TRAPPC12-216ENST00000469400 KMOO15229 486 aa12.58□□□□□ -0.4
TRAPPC12-216ENST00000469400 KRT86O43790 486 aa12.58□□□□□ -0.4
TRAPPC12-216ENST00000469400 FTLP02792 175 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC12-216ENST00000469400 EBLN1P0CF75 366 aa12.58□□□□□ -0.4
TRAPPC12-216ENST00000469400 IL4RP24394 825 aa12.58□□□□□ -0.4
TRAPPC12-216ENST00000469400 ZNF165P49910 485 aa12.58□□□□□ -0.4
TRAPPC12-216ENST00000469400 DRG2P55039 364 aaKnown RBP12.58□□□□□ -0.4
TRAPPC12-216ENST00000469400 PDE1BQ01064 536 aa12.58□□□□□ -0.4
TRAPPC12-216ENST00000469400 ACY1Q03154 408 aa12.58□□□□□ -0.4
TRAPPC12-216ENST00000469400 UBXN1Q04323 297 aa12.58□□□□□ -0.4
TRAPPC12-216ENST00000469400 ZNF569Q5MCW4 686 aa12.58□□□□□ -0.4
TRAPPC12-216ENST00000469400 C1QL3Q5VWW1 255 aa12.58□□□□□ -0.4
TRAPPC12-216ENST00000469400 ALS2CLQ60I27 953 aa12.58□□□□□ -0.4
TRAPPC12-216ENST00000469400 WASH2PQ6VEQ5 465 aa12.58□□□□□ -0.4
TRAPPC12-216ENST00000469400 CERS6Q6ZMG9 384 aa12.58□□□□□ -0.4
TRAPPC12-216ENST00000469400 ZNF547Q8IVP9 402 aa12.58□□□□□ -0.4
TRAPPC12-216ENST00000469400 RBM12BQ8IXT5 1001 aaKnown RBP12.58□□□□□ -0.4
TRAPPC12-216ENST00000469400 SRRM1Q8IYB3 904 aaKnown RBP12.58□□□□□ -0.4
TRAPPC12-216ENST00000469400 ADAMTS17Q8TE56 1095 aa12.58□□□□□ -0.4
TRAPPC12-216ENST00000469400 PNPLA2Q96AD5 504 aa12.58□□□□□ -0.4
TRAPPC12-216ENST00000469400 CXorf40BQ96DE9 158 aa12.58□□□□□ -0.4
TRAPPC12-216ENST00000469400 ERGIC2Q96RQ1 377 aa12.58□□□□□ -0.4
TRAPPC12-216ENST00000469400 TIMM29Q9BSF4 260 aa12.58□□□□□ -0.4
TRAPPC12-216ENST00000469400 MLPHQ9BV36 600 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC12-216ENST00000469400 NUDT9Q9BW91 350 aa12.58□□□□□ -0.4
TRAPPC12-216ENST00000469400 SPATA16Q9BXB7 569 aa12.58□□□□□ -0.4
TRAPPC12-216ENST00000469400 PCDH18Q9HCL0 1135 aa12.58□□□□□ -0.4
TRAPPC12-216ENST00000469400 WASH6PQ9NQA3 447 aa12.58□□□□□ -0.4
TRAPPC12-216ENST00000469400 FGF21Q9NSA1 209 aa12.58□□□□□ -0.4
TRAPPC12-216ENST00000469400 SSU72P8A0A1W2PR75 194 aa12.57□□□□□ -0.4
TRAPPC12-216ENST00000469400 A6NL46 340 aa12.57□□□□□ -0.4
TRAPPC12-216ENST00000469400 ANKRD66B4E2M5 251 aa12.57□□□□□ -0.4
TRAPPC12-216ENST00000469400 MATN3O15232 486 aa12.57□□□□□ -0.4
TRAPPC12-216ENST00000469400 MTX2O75431 263 aa12.57□□□□□ -0.4
TRAPPC12-216ENST00000469400 TMEM63AO94886 807 aa12.57□□□□□ -0.4
TRAPPC12-216ENST00000469400 CBX6O95503 412 aa12.57□□□□□ -0.4
TRAPPC12-216ENST00000469400 GALNT2Q10471 571 aa12.57□□□□□ -0.4
TRAPPC12-216ENST00000469400 NR6A1Q15406 480 aa12.57□□□□□ -0.4
TRAPPC12-216ENST00000469400 AGAP9Q5VTM2 703 aa12.57□□□□□ -0.4
TRAPPC12-216ENST00000469400 IZUMO3Q5VZ72 239 aa12.57□□□□□ -0.4
TRAPPC12-216ENST00000469400 ZNF517Q6ZMY9 492 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms