RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 GRPEL1Q9HAV7 217 aa11.38□□□□□ -0.59
CDHR3-205ENST00000468143 THSD1Q9NS62 852 aa11.38□□□□□ -0.59
CDHR3-205ENST00000468143 WDR70Q9NW82 654 aa11.38□□□□□ -0.59
CDHR3-205ENST00000468143 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.38□□□□□ -0.59
CDHR3-205ENST00000468143 TMEM9Q9P0T7 183 aa11.38□□□□□ -0.59
CDHR3-205ENST00000468143 PISDQ9UG56 409 aa11.38□□□□□ -0.59
CDHR3-205ENST00000468143 ZNF148Q9UQR1 794 aa11.38□□□□□ -0.59
CDHR3-205ENST00000468143 LOXL2Q9Y4K0 774 aa11.38□□□□□ -0.59
CDHR3-205ENST00000468143 PCDHGA8Q9Y5G5 932 aa11.38□□□□□ -0.59
CDHR3-205ENST00000468143 EPG5Q9HCE0 2579 aa11.38□□□□□ -0.59
CDHR3-205ENST00000468143 COL27A1Q8IZC6 1860 aaPredicted RBP11.38□□□□□ -0.59
CDHR3-205ENST00000468143 ASPMQ8IZT6 3477 aa11.37□□□□□ -0.59
CDHR3-205ENST00000468143 PRAMEF33A0A0G2JMD5 474 aa11.37□□□□□ -0.59
CDHR3-205ENST00000468143 IGHV5-10-1A0A0J9YXX1 117 aa11.37□□□□□ -0.59
CDHR3-205ENST00000468143 CCDC78A2IDD5 438 aa11.37□□□□□ -0.59
CDHR3-205ENST00000468143 OR2AG2A6NM03 316 aa11.37□□□□□ -0.59
CDHR3-205ENST00000468143 PDZK1P1A8MUH7 402 aa11.37□□□□□ -0.59
CDHR3-205ENST00000468143 TMX2-CTNND1H3BSU7 103 aa11.37□□□□□ -0.59
CDHR3-205ENST00000468143 ZW10O43264 779 aa11.37□□□□□ -0.59
CDHR3-205ENST00000468143 POP7O75817 140 aaKnown RBP11.37□□□□□ -0.59
CDHR3-205ENST00000468143 SRP72O76094 671 aaKnown RBP11.37□□□□□ -0.59
CDHR3-205ENST00000468143 PRAMEF1O95521 474 aa11.37□□□□□ -0.59
CDHR3-205ENST00000468143 IFNB1P01574 187 aa11.37□□□□□ -0.59
CDHR3-205ENST00000468143 JMJD7P0C870 316 aa11.37□□□□□ -0.59
CDHR3-205ENST00000468143 ZSCAN5DPP0CG00 497 aa11.37□□□□□ -0.59
CDHR3-205ENST00000468143 F3P13726 295 aa11.37□□□□□ -0.59
CDHR3-205ENST00000468143 MSH3P20585 1137 aa11.37□□□□□ -0.59
CDHR3-205ENST00000468143 PBLDP30039 288 aaPredicted RBP11.37□□□□□ -0.59
CDHR3-205ENST00000468143 ABCG1P45844 678 aa11.37□□□□□ -0.59
CDHR3-205ENST00000468143 FASLGP48023 281 aa11.37□□□□□ -0.59
CDHR3-205ENST00000468143 CTSCP53634 463 aa11.37□□□□□ -0.59
CDHR3-205ENST00000468143 MAPK10P53779 464 aa11.37□□□□□ -0.59
CDHR3-205ENST00000468143 PCBP4P57723 403 aaKnown RBP11.37□□□□□ -0.59
CDHR3-205ENST00000468143 ERVPABLB-1P60509 514 aa11.37□□□□□ -0.59
CDHR3-205ENST00000468143 XIAPP98170 497 aa11.37□□□□□ -0.59
CDHR3-205ENST00000468143 ITGA9Q13797 1035 aa11.37□□□□□ -0.59
CDHR3-205ENST00000468143 C16orf72Q14CZ0 275 aa11.37□□□□□ -0.59
CDHR3-205ENST00000468143 SNAP47Q5SQN1 464 aa11.37□□□□□ -0.59
CDHR3-205ENST00000468143 TMEM220Q6QAJ8 160 aa11.37□□□□□ -0.59
CDHR3-205ENST00000468143 ZNF662Q6ZS27 426 aa11.37□□□□□ -0.59
CDHR3-205ENST00000468143 C11orf96Q7Z7L8 435 aa11.37□□□□□ -0.59
CDHR3-205ENST00000468143 SLC9B2Q86UD5 537 aa11.37□□□□□ -0.59
CDHR3-205ENST00000468143 BEND7Q8N7W2 519 aaPredicted RBP11.37□□□□□ -0.59
CDHR3-205ENST00000468143 ZNF248Q8NDW4 579 aa11.37□□□□□ -0.59
CDHR3-205ENST00000468143 DTX3LQ8TDB6 740 aa11.37□□□□□ -0.59
CDHR3-205ENST00000468143 LRRC45Q96CN5 670 aa11.37□□□□□ -0.59
CDHR3-205ENST00000468143 SGF29Q96ES7 293 aa11.37□□□□□ -0.59
CDHR3-205ENST00000468143 AHCYL2Q96HN2 611 aaKnown RBP11.37□□□□□ -0.59
CDHR3-205ENST00000468143 CCDC74BQ96LY2 380 aa11.37□□□□□ -0.59
CDHR3-205ENST00000468143 PPP1R2P1Q96PQ5 205 aa11.37□□□□□ -0.59
CDHR3-205ENST00000468143 ARNT2Q9HBZ2 717 aa11.37□□□□□ -0.59
CDHR3-205ENST00000468143 SARS2Q9NP81 518 aaKnown RBP11.37□□□□□ -0.59
CDHR3-205ENST00000468143 CPNE7Q9UBL6 633 aa11.37□□□□□ -0.59
CDHR3-205ENST00000468143 PPP2R2CQ9Y2T4 447 aa11.37□□□□□ -0.59
CDHR3-205ENST00000468143 KMT2BQ9UMN6 2715 aaPredicted RBP11.37□□□□□ -0.59
CDHR3-205ENST00000468143 ASXL3Q9C0F0 2248 aa11.37□□□□□ -0.59
CDHR3-205ENST00000468143 KIR2DS5A0A0G2JLQ3 304 aa11.36□□□□□ -0.59
CDHR3-205ENST00000468143 A0A0G2JNG1 304 aa11.36□□□□□ -0.59
CDHR3-205ENST00000468143 A8MU76 341 aa11.36□□□□□ -0.59
CDHR3-205ENST00000468143 CDRT15L2A8MXV6 281 aa11.36□□□□□ -0.59
CDHR3-205ENST00000468143 GPR89AB7ZAQ6 455 aa11.36□□□□□ -0.59
CDHR3-205ENST00000468143 KIR2DS3K7RE56 304 aa11.36□□□□□ -0.59
CDHR3-205ENST00000468143 KLK10O43240 276 aa11.36□□□□□ -0.59
CDHR3-205ENST00000468143 LDB2O43679 373 aa11.36□□□□□ -0.59
CDHR3-205ENST00000468143 PPFIA2O75334 1257 aa11.36□□□□□ -0.59
CDHR3-205ENST00000468143 ZNF189O75820 626 aaPredicted RBP11.36□□□□□ -0.59
CDHR3-205ENST00000468143 GPR89BP0CG08 455 aa11.36□□□□□ -0.59
CDHR3-205ENST00000468143 PRSS56P0CW18 603 aa11.36□□□□□ -0.59
CDHR3-205ENST00000468143 CCL4P13236 92 aa11.36□□□□□ -0.59
CDHR3-205ENST00000468143 SLC2A4P14672 509 aa11.36□□□□□ -0.59
CDHR3-205ENST00000468143 BRAFP15056 766 aa11.36□□□□□ -0.59
CDHR3-205ENST00000468143 IDSP22304 550 aa11.36□□□□□ -0.59
CDHR3-205ENST00000468143 SLC5A2P31639 672 aa11.36□□□□□ -0.59
CDHR3-205ENST00000468143 AKT1P31749 480 aa11.36□□□□□ -0.59
CDHR3-205ENST00000468143 STIP1P31948 543 aaKnown RBP11.36□□□□□ -0.59
CDHR3-205ENST00000468143 CXCR5P32302 372 aa11.36□□□□□ -0.59
CDHR3-205ENST00000468143 CSF2RBP32927 897 aa11.36□□□□□ -0.59
CDHR3-205ENST00000468143 ETV5P41161 510 aa11.36□□□□□ -0.59
CDHR3-205ENST00000468143 SLC19A1P41440 591 aa11.36□□□□□ -0.59
CDHR3-205ENST00000468143 CDKN1CP49918 316 aaPredicted RBP11.36□□□□□ -0.59
CDHR3-205ENST00000468143 CLCNKAP51800 687 aa11.36□□□□□ -0.59
CDHR3-205ENST00000468143 SEPT6Q14141 434 aa11.36□□□□□ -0.59
CDHR3-205ENST00000468143 POU6F1Q14863 301 aa11.36□□□□□ -0.59
CDHR3-205ENST00000468143 KIR2DS5Q14953 304 aa11.36□□□□□ -0.59
CDHR3-205ENST00000468143 OASLQ15646 514 aaKnown RBP11.36□□□□□ -0.59
CDHR3-205ENST00000468143 P3H1Q32P28 736 aa11.36□□□□□ -0.59
CDHR3-205ENST00000468143 LDLRAP1Q5SW96 308 aa11.36□□□□□ -0.59
CDHR3-205ENST00000468143 FNBP1LQ5T0N5 605 aa11.36□□□□□ -0.59
CDHR3-205ENST00000468143 PDZD3Q86UT5 571 aa11.36□□□□□ -0.59
CDHR3-205ENST00000468143 SPACA3Q8IXA5 215 aa11.36□□□□□ -0.59
CDHR3-205ENST00000468143 KLHDC8BQ8IXV7 354 aa11.36□□□□□ -0.59
CDHR3-205ENST00000468143 GLIS1Q8NBF1 620 aa11.36□□□□□ -0.59
CDHR3-205ENST00000468143 DDHD1Q8NEL9 900 aa11.36□□□□□ -0.59
CDHR3-205ENST00000468143 OR52K1Q8NGK4 314 aa11.36□□□□□ -0.59
CDHR3-205ENST00000468143 OR10G6Q8NH81 332 aa11.36□□□□□ -0.59
CDHR3-205ENST00000468143 KCNE4Q8WWG9 221 aa11.36□□□□□ -0.59
CDHR3-205ENST00000468143 NCSTNQ92542 709 aa11.36□□□□□ -0.59
CDHR3-205ENST00000468143 USP7Q93009 1102 aa11.36□□□□□ -0.59
CDHR3-205ENST00000468143 CCDC97Q96F63 343 aaPredicted RBP11.36□□□□□ -0.59
CDHR3-205ENST00000468143 DNAJC1Q96KC8 554 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms