RNA–Protein interactions for RNA: ENST00000466613.2

SDHB-203, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 828 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-203ENST00000466613 PRDM8Q9NQV8 689 aa16.42■□□□□ 0.22
SDHB-203ENST00000466613 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.42■□□□□ 0.22
SDHB-203ENST00000466613 PKP3Q9Y446 797 aa16.42■□□□□ 0.22
SDHB-203ENST00000466613 ATMQ13315 3056 aa16.42■□□□□ 0.22
SDHB-203ENST00000466613 ATRXP46100 2492 aa16.41■□□□□ 0.22
SDHB-203ENST00000466613 PRAMEF33A0A0G2JMD5 474 aa16.41■□□□□ 0.22
SDHB-203ENST00000466613 GLYATL1P3A0A0U1RQE8 302 aa16.41■□□□□ 0.22
SDHB-203ENST00000466613 C9orf172C9J069 976 aa16.41■□□□□ 0.22
SDHB-203ENST00000466613 KCNN4O15554 427 aa16.41■□□□□ 0.22
SDHB-203ENST00000466613 PRAMEF10O60809 474 aa16.41■□□□□ 0.22
SDHB-203ENST00000466613 PPFIA2O75334 1257 aa16.41■□□□□ 0.22
SDHB-203ENST00000466613 STK10O94804 968 aaKnown RBP16.41■□□□□ 0.22
SDHB-203ENST00000466613 AGTP01019 485 aa16.41■□□□□ 0.22
SDHB-203ENST00000466613 LIPCP11150 499 aa16.41■□□□□ 0.22
SDHB-203ENST00000466613 ZNF7P17097 686 aaPredicted RBP16.41■□□□□ 0.22
SDHB-203ENST00000466613 PSMB4P28070 264 aa16.41■□□□□ 0.22
SDHB-203ENST00000466613 PPM1FP49593 454 aaPredicted RBP16.41■□□□□ 0.22
SDHB-203ENST00000466613 EPHA4P54764 986 aa16.41■□□□□ 0.22
SDHB-203ENST00000466613 VAC14Q08AM6 782 aa16.41■□□□□ 0.22
SDHB-203ENST00000466613 NFATC2Q13469 925 aa16.41■□□□□ 0.22
SDHB-203ENST00000466613 GTF2H3Q13889 308 aa16.41■□□□□ 0.22
SDHB-203ENST00000466613 ARHGAP40Q5TG30 622 aa16.41■□□□□ 0.22
SDHB-203ENST00000466613 DARS2Q6PI48 645 aaKnown RBP16.41■□□□□ 0.22
SDHB-203ENST00000466613 FAM151BQ6UXP7 276 aa16.41■□□□□ 0.22
SDHB-203ENST00000466613 UBL4BQ8N7F7 174 aa16.41■□□□□ 0.22
SDHB-203ENST00000466613 SPC24Q8NBT2 197 aa16.41■□□□□ 0.22
SDHB-203ENST00000466613 GDAP1Q8TB36 358 aa16.41■□□□□ 0.22
SDHB-203ENST00000466613 BRSK1Q8TDC3 778 aa16.41■□□□□ 0.22
SDHB-203ENST00000466613 SNRNP27Q8WVK2 155 aaKnown RBP16.41■□□□□ 0.22
SDHB-203ENST00000466613 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.41■□□□□ 0.22
SDHB-203ENST00000466613 B3GNT4Q9C0J1 378 aa16.41■□□□□ 0.22
SDHB-203ENST00000466613 TMEM9Q9P0T7 183 aa16.41■□□□□ 0.22
SDHB-203ENST00000466613 CPNE7Q9UBL6 633 aa16.41■□□□□ 0.22
SDHB-203ENST00000466613 TRIM10Q9UDY6 481 aa16.41■□□□□ 0.22
SDHB-203ENST00000466613 SLC23A2Q9UGH3 650 aa16.41■□□□□ 0.22
SDHB-203ENST00000466613 AAR2Q9Y312 384 aaKnown RBP16.41■□□□□ 0.22
SDHB-203ENST00000466613 SDK2Q58EX2 2172 aa16.4■□□□□ 0.22
SDHB-203ENST00000466613 A0A0U1RQJ8 604 aa16.4■□□□□ 0.22
SDHB-203ENST00000466613 PRR19A6NJB7 356 aa16.4■□□□□ 0.22
SDHB-203ENST00000466613 MIF4GDA9UHW6 222 aaKnown RBP16.4■□□□□ 0.22
SDHB-203ENST00000466613 ATXN7O15265 892 aaPredicted RBP16.4■□□□□ 0.22
SDHB-203ENST00000466613 ZNF189O75820 626 aaPredicted RBP16.4■□□□□ 0.22
SDHB-203ENST00000466613 CCL4P13236 92 aa16.4■□□□□ 0.22
SDHB-203ENST00000466613 MPSTP25325 297 aa16.4■□□□□ 0.22
SDHB-203ENST00000466613 CD82P27701 267 aa16.4■□□□□ 0.22
SDHB-203ENST00000466613 ADRA1AP35348 466 aa16.4■□□□□ 0.22
SDHB-203ENST00000466613 UBE2IP63279 158 aaKnown RBP16.4■□□□□ 0.22
SDHB-203ENST00000466613 TMEM115Q12893 351 aaPredicted RBP16.4■□□□□ 0.22
SDHB-203ENST00000466613 ITGA9Q13797 1035 aa16.4■□□□□ 0.22
SDHB-203ENST00000466613 PRPSAP1Q14558 356 aa16.4■□□□□ 0.22
SDHB-203ENST00000466613 CHRNA6Q15825 494 aa16.4■□□□□ 0.22
SDHB-203ENST00000466613 TMEM164Q5U3C3 297 aa16.4■□□□□ 0.22
SDHB-203ENST00000466613 WDR74Q6RFH5 385 aaPredicted RBP16.4■□□□□ 0.22
SDHB-203ENST00000466613 RANBP10Q6VN20 620 aa16.4■□□□□ 0.22
SDHB-203ENST00000466613 CCDC81Q6ZN84 652 aa16.4■□□□□ 0.22
SDHB-203ENST00000466613 TRAPPC5Q8IUR0 188 aa16.4■□□□□ 0.22
SDHB-203ENST00000466613 AGBL5Q8NDL9 886 aa16.4■□□□□ 0.22
SDHB-203ENST00000466613 SPATA13Q96N96 652 aa16.4■□□□□ 0.22
SDHB-203ENST00000466613 FOXJ2Q9P0K8 574 aa16.4■□□□□ 0.22
SDHB-203ENST00000466613 PDP2Q9P2J9 529 aa16.4■□□□□ 0.22
SDHB-203ENST00000466613 PACSIN2Q9UNF0 486 aaPredicted RBP16.4■□□□□ 0.22
SDHB-203ENST00000466613 DNAJC16Q9Y2G8 782 aa16.4■□□□□ 0.22
SDHB-203ENST00000466613 GOLGA6L9A6NEM1 432 aa16.39■□□□□ 0.21
SDHB-203ENST00000466613 EIF4E1BA6NMX2 242 aaKnown RBP16.39■□□□□ 0.21
SDHB-203ENST00000466613 K7ENP7 123 aa16.39■□□□□ 0.21
SDHB-203ENST00000466613 STX7O15400 261 aaKnown RBP16.39■□□□□ 0.21
SDHB-203ENST00000466613 GPR39O43194 453 aa16.39■□□□□ 0.21
SDHB-203ENST00000466613 BUD23O43709 281 aaKnown RBP16.39■□□□□ 0.21
SDHB-203ENST00000466613 PTMAP06454 111 aaKnown RBP16.39■□□□□ 0.21
SDHB-203ENST00000466613 XRCC1P18887 633 aaPredicted RBP16.39■□□□□ 0.21
SDHB-203ENST00000466613 CSTF2P33240 577 aaKnown RBP eCLIP16.39■□□□□ 0.21
SDHB-203ENST00000466613 RHDQ02161 417 aa16.39■□□□□ 0.21
SDHB-203ENST00000466613 OLIG2Q13516 323 aa16.39■□□□□ 0.21
SDHB-203ENST00000466613 LDLRAP1Q5SW96 308 aa16.39■□□□□ 0.21
SDHB-203ENST00000466613 INO80CQ6PI98 192 aaPredicted RBP16.39■□□□□ 0.21
SDHB-203ENST00000466613 C11orf96Q7Z7L8 435 aa16.39■□□□□ 0.21
SDHB-203ENST00000466613 LSM14AQ8ND56 463 aaKnown RBP16.39■□□□□ 0.21
SDHB-203ENST00000466613 CCDC112Q8NEF3 446 aa16.39■□□□□ 0.21
SDHB-203ENST00000466613 DDHD1Q8NEL9 900 aa16.39■□□□□ 0.21
SDHB-203ENST00000466613 CCDC110Q8TBZ0 833 aa16.39■□□□□ 0.21
SDHB-203ENST00000466613 TTC25Q96NG3 672 aa16.39■□□□□ 0.21
SDHB-203ENST00000466613 PPP1R2P1Q96PQ5 205 aa16.39■□□□□ 0.21
SDHB-203ENST00000466613 CCNL2Q96S94 520 aaPredicted RBP16.39■□□□□ 0.21
SDHB-203ENST00000466613 ZCCHC2Q9C0B9 1178 aaKnown RBP16.39■□□□□ 0.21
SDHB-203ENST00000466613 EPB41L1Q9H4G0 881 aa16.39■□□□□ 0.21
SDHB-203ENST00000466613 UCK1Q9HA47 277 aa16.39■□□□□ 0.21
SDHB-203ENST00000466613 SCHIP1Q9P0W5 487 aaPredicted RBP16.39■□□□□ 0.21
SDHB-203ENST00000466613 ARL5AQ9Y689 179 aa16.39■□□□□ 0.21
SDHB-203ENST00000466613 LILRA5A6NI73 299 aa16.38■□□□□ 0.21
SDHB-203ENST00000466613 PDZK1P1A8MUH7 402 aa16.38■□□□□ 0.21
SDHB-203ENST00000466613 ERVH48-1M5A8F1 160 aa16.38■□□□□ 0.21
SDHB-203ENST00000466613 TK2O00142 265 aa16.38■□□□□ 0.21
SDHB-203ENST00000466613 GAPDHSO14556 408 aaPredicted RBP16.38■□□□□ 0.21
SDHB-203ENST00000466613 DDX3YO15523 660 aaKnown RBP16.38■□□□□ 0.21
SDHB-203ENST00000466613 KALRNO60229 2985 aa16.38■□□□□ 0.21
SDHB-203ENST00000466613 UGT1A9O60656 530 aa16.38■□□□□ 0.21
SDHB-203ENST00000466613 FTCDO95954 541 aa16.38■□□□□ 0.21
SDHB-203ENST00000466613 FGF3P11487 239 aaPredicted RBP16.38■□□□□ 0.21
SDHB-203ENST00000466613 VCLP18206 1134 aa16.38■□□□□ 0.21
SDHB-203ENST00000466613 UGT1A6P19224 532 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms