RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 MPP5Q8N3R9 675 aa12.22□□□□□ -0.45
CHPF2-202ENST00000465601 KYQ8NBH2 561 aa12.22□□□□□ -0.45
CHPF2-202ENST00000465601 OR6P1Q8NGX9 317 aa12.22□□□□□ -0.45
CHPF2-202ENST00000465601 ZDHHC1Q8WTX9 485 aa12.22□□□□□ -0.45
CHPF2-202ENST00000465601 NAT14Q8WUY8 206 aa12.22□□□□□ -0.45
CHPF2-202ENST00000465601 GLMNQ92990 594 aa12.22□□□□□ -0.45
CHPF2-202ENST00000465601 ULK4Q96C45 1275 aa12.22□□□□□ -0.45
CHPF2-202ENST00000465601 CCDC97Q96F63 343 aaPredicted RBP12.22□□□□□ -0.45
CHPF2-202ENST00000465601 SLC23A2Q9UGH3 650 aa12.22□□□□□ -0.45
CHPF2-202ENST00000465601 CDC23Q9UJX2 597 aa12.22□□□□□ -0.45
CHPF2-202ENST00000465601 RIMKLBQ9ULI2 386 aa12.22□□□□□ -0.45
CHPF2-202ENST00000465601 PADI4Q9UM07 663 aa12.22□□□□□ -0.45
CHPF2-202ENST00000465601 KIF26BQ2KJY2 2108 aa12.22□□□□□ -0.45
CHPF2-202ENST00000465601 TRBV23OR9-2A0A075B6M9 112 aa12.21□□□□□ -0.45
CHPF2-202ENST00000465601 TRBV5-4A0A0C4DH59 114 aa12.21□□□□□ -0.45
CHPF2-202ENST00000465601 OR2AG2A6NM03 316 aa12.21□□□□□ -0.45
CHPF2-202ENST00000465601 KMOO15229 486 aa12.21□□□□□ -0.45
CHPF2-202ENST00000465601 NOBOXO60393 691 aa12.21□□□□□ -0.45
CHPF2-202ENST00000465601 RFPL3O75679 317 aa12.21□□□□□ -0.45
CHPF2-202ENST00000465601 DKK1O94907 266 aa12.21□□□□□ -0.45
CHPF2-202ENST00000465601 TOP3BO95985 862 aaKnown RBP12.21□□□□□ -0.45
CHPF2-202ENST00000465601 GOT2P00505 430 aaKnown RBP12.21□□□□□ -0.45
CHPF2-202ENST00000465601 MLNP12872 115 aa12.21□□□□□ -0.45
CHPF2-202ENST00000465601 ZNF7P17097 686 aaPredicted RBP12.21□□□□□ -0.45
CHPF2-202ENST00000465601 NMBRP28336 390 aa12.21□□□□□ -0.45
CHPF2-202ENST00000465601 RPIAP49247 311 aa12.21□□□□□ -0.45
CHPF2-202ENST00000465601 B4GALNT1Q00973 533 aa12.21□□□□□ -0.45
CHPF2-202ENST00000465601 ACVR1Q04771 509 aa12.21□□□□□ -0.45
CHPF2-202ENST00000465601 FOXC1Q12948 553 aa12.21□□□□□ -0.45
CHPF2-202ENST00000465601 LRP8Q14114 963 aa12.21□□□□□ -0.45
CHPF2-202ENST00000465601 DHX34Q14147 1143 aaKnown RBP12.21□□□□□ -0.45
CHPF2-202ENST00000465601 CASC4Q6P4E1 433 aa12.21□□□□□ -0.45
CHPF2-202ENST00000465601 GUSBP11Q6P575 273 aa12.21□□□□□ -0.45
CHPF2-202ENST00000465601 EFL1Q7Z2Z2 1120 aaKnown RBP12.21□□□□□ -0.45
CHPF2-202ENST00000465601 SERPINA9Q86WD7 417 aa12.21□□□□□ -0.45
CHPF2-202ENST00000465601 CHCHD4Q8N4Q1 142 aa12.21□□□□□ -0.45
CHPF2-202ENST00000465601 ARL10Q8N8L6 244 aa12.21□□□□□ -0.45
CHPF2-202ENST00000465601 GPR156Q8NFN8 814 aa12.21□□□□□ -0.45
CHPF2-202ENST00000465601 SGF29Q96ES7 293 aa12.21□□□□□ -0.45
CHPF2-202ENST00000465601 DCUN1D1Q96GG9 259 aa12.21□□□□□ -0.45
CHPF2-202ENST00000465601 SERPINB12Q96P63 405 aa12.21□□□□□ -0.45
CHPF2-202ENST00000465601 COPS8Q99627 209 aa12.21□□□□□ -0.45
CHPF2-202ENST00000465601 KIFC1Q9BW19 673 aa12.21□□□□□ -0.45
CHPF2-202ENST00000465601 TRIM31Q9BZY9 425 aa12.21□□□□□ -0.45
CHPF2-202ENST00000465601 ZCCHC2Q9C0B9 1178 aaKnown RBP12.21□□□□□ -0.45
CHPF2-202ENST00000465601 XAB2Q9HCS7 855 aaKnown RBP12.21□□□□□ -0.45
CHPF2-202ENST00000465601 KLC4Q9NSK0 619 aa12.21□□□□□ -0.45
CHPF2-202ENST00000465601 EVA1BQ9NVM1 165 aa12.21□□□□□ -0.45
CHPF2-202ENST00000465601 ZDHHC3Q9NYG2 299 aa12.21□□□□□ -0.45
CHPF2-202ENST00000465601 NCKIPSDQ9NZQ3 722 aa12.21□□□□□ -0.45
CHPF2-202ENST00000465601 DNAJC16Q9Y2G8 782 aa12.21□□□□□ -0.45
CHPF2-202ENST00000465601 PCDHGA1Q9Y5H4 931 aa12.21□□□□□ -0.45
CHPF2-202ENST00000465601 EME2A4GXA9 379 aaPredicted RBP12.2□□□□□ -0.46
CHPF2-202ENST00000465601 SDR42E2A6NKP2 422 aa12.2□□□□□ -0.46
CHPF2-202ENST00000465601 KIF2AO00139 706 aaPredicted RBP12.2□□□□□ -0.46
CHPF2-202ENST00000465601 SNX2O60749 519 aa12.2□□□□□ -0.46
CHPF2-202ENST00000465601 POP7O75817 140 aaKnown RBP12.2□□□□□ -0.46
CHPF2-202ENST00000465601 EML2O95834 649 aa12.2□□□□□ -0.46
CHPF2-202ENST00000465601 TUBB4AP04350 444 aa12.2□□□□□ -0.46
CHPF2-202ENST00000465601 ADRB1P08588 477 aa12.2□□□□□ -0.46
CHPF2-202ENST00000465601 ACRV1P26436 265 aa12.2□□□□□ -0.46
CHPF2-202ENST00000465601 FOXN2P32314 431 aa12.2□□□□□ -0.46
CHPF2-202ENST00000465601 MAZP56270 477 aaKnown RBP12.2□□□□□ -0.46
CHPF2-202ENST00000465601 PRAMEP78395 509 aa12.2□□□□□ -0.46
CHPF2-202ENST00000465601 DBN1Q16643 649 aa12.2□□□□□ -0.46
CHPF2-202ENST00000465601 INSCQ1MX18 579 aa12.2□□□□□ -0.46
CHPF2-202ENST00000465601 FNBP1LQ5T0N5 605 aa12.2□□□□□ -0.46
CHPF2-202ENST00000465601 AFTPHQ6ULP2 937 aa12.2□□□□□ -0.46
CHPF2-202ENST00000465601 DHRS13Q6UX07 377 aa12.2□□□□□ -0.46
CHPF2-202ENST00000465601 C11orf96Q7Z7L8 435 aa12.2□□□□□ -0.46
CHPF2-202ENST00000465601 PCGF5Q86SE9 256 aa12.2□□□□□ -0.46
CHPF2-202ENST00000465601 BEND7Q8N7W2 519 aaPredicted RBP12.2□□□□□ -0.46
CHPF2-202ENST00000465601 OR4L1Q8NH43 312 aa12.2□□□□□ -0.46
CHPF2-202ENST00000465601 IFI44Q8TCB0 444 aa12.2□□□□□ -0.46
CHPF2-202ENST00000465601 PATE1Q8WXA2 126 aa12.2□□□□□ -0.46
CHPF2-202ENST00000465601 ADAMTS14Q8WXS8 1223 aa12.2□□□□□ -0.46
CHPF2-202ENST00000465601 PEX13Q92968 403 aa12.2□□□□□ -0.46
CHPF2-202ENST00000465601 MFSD3Q96ES6 412 aa12.2□□□□□ -0.46
CHPF2-202ENST00000465601 TRIM56Q9BRZ2 755 aaKnown RBP12.2□□□□□ -0.46
CHPF2-202ENST00000465601 OSGEPL1Q9H4B0 414 aa12.2□□□□□ -0.46
CHPF2-202ENST00000465601 MRM3Q9HC36 420 aaKnown RBP12.2□□□□□ -0.46
CHPF2-202ENST00000465601 TREX1Q9NSU2 369 aa12.2□□□□□ -0.46
CHPF2-202ENST00000465601 TBC1D29Q9UFV1 150 aa12.2□□□□□ -0.46
CHPF2-202ENST00000465601 SOX13Q9UN79 622 aa12.2□□□□□ -0.46
CHPF2-202ENST00000465601 SNX24Q9Y343 169 aa12.2□□□□□ -0.46
CHPF2-202ENST00000465601 AKAP13Q12802 2813 aa12.2□□□□□ -0.46
CHPF2-202ENST00000465601 ACACBO00763 2458 aa12.19□□□□□ -0.46
CHPF2-202ENST00000465601 FAM187AA6NFU0 413 aa12.19□□□□□ -0.46
CHPF2-202ENST00000465601 EFCAB8A8MWE9 144 aa12.19□□□□□ -0.46
CHPF2-202ENST00000465601 CFAP99D6REC4 459 aa12.19□□□□□ -0.46
CHPF2-202ENST00000465601 RAD51CO43502 376 aa12.19□□□□□ -0.46
CHPF2-202ENST00000465601 HYAL3O43820 417 aaPredicted RBP12.19□□□□□ -0.46
CHPF2-202ENST00000465601 TRIM16O95361 564 aa12.19□□□□□ -0.46
CHPF2-202ENST00000465601 RALBP11234 206 aa12.19□□□□□ -0.46
CHPF2-202ENST00000465601 ATP1B2P14415 290 aaPredicted RBP12.19□□□□□ -0.46
CHPF2-202ENST00000465601 PBLDP30039 288 aaPredicted RBP12.19□□□□□ -0.46
CHPF2-202ENST00000465601 ITGA8P53708 1063 aa12.19□□□□□ -0.46
CHPF2-202ENST00000465601 CLDN6P56747 220 aa12.19□□□□□ -0.46
CHPF2-202ENST00000465601 CKAP4Q07065 602 aaKnown RBP12.19□□□□□ -0.46
CHPF2-202ENST00000465601 ILKQ13418 452 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms