RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 NAF1Q96HR8 494 aaKnown RBP17.29■□□□□ 0.36
CPSF4-209ENST00000465132 GRHL1Q9NZI5 618 aa17.29■□□□□ 0.36
CPSF4-209ENST00000465132 DMGDHQ9UI17 866 aaKnown RBP17.29■□□□□ 0.36
CPSF4-209ENST00000465132 ARL5AQ9Y689 179 aa17.29■□□□□ 0.36
CPSF4-209ENST00000465132 SLC30A1Q9Y6M5 507 aa17.29■□□□□ 0.36
CPSF4-209ENST00000465132 TDRD6O60522 2096 aaKnown RBP17.28■□□□□ 0.36
CPSF4-209ENST00000465132 GLYATL1P3A0A0U1RQE8 302 aa17.28■□□□□ 0.36
CPSF4-209ENST00000465132 F8W8V4 182 aa17.28■□□□□ 0.36
CPSF4-209ENST00000465132 H7C0S8 307 aa17.28■□□□□ 0.36
CPSF4-209ENST00000465132 CACNB4O00305 520 aaPredicted RBP17.28■□□□□ 0.36
CPSF4-209ENST00000465132 PGAM1P18669 254 aa17.28■□□□□ 0.36
CPSF4-209ENST00000465132 ITGALP20701 1170 aa17.28■□□□□ 0.36
CPSF4-209ENST00000465132 GPR1P46091 355 aa17.28■□□□□ 0.36
CPSF4-209ENST00000465132 ZNF140P52738 457 aaPredicted RBP17.28■□□□□ 0.36
CPSF4-209ENST00000465132 EIF2B5Q13144 721 aaKnown RBP17.28■□□□□ 0.36
CPSF4-209ENST00000465132 MSLNQ13421 630 aaPredicted RBP17.28■□□□□ 0.36
CPSF4-209ENST00000465132 ISXQ2M1V0 245 aa17.28■□□□□ 0.36
CPSF4-209ENST00000465132 DEFB133Q30KQ1 61 aa17.28■□□□□ 0.36
CPSF4-209ENST00000465132 BBS9Q3SYG4 887 aa17.28■□□□□ 0.36
CPSF4-209ENST00000465132 GPR33Q49SQ1 333 aa17.28■□□□□ 0.36
CPSF4-209ENST00000465132 CCDC38Q502W7 563 aa17.28■□□□□ 0.36
CPSF4-209ENST00000465132 AARS2Q5JTZ9 985 aaKnown RBP17.28■□□□□ 0.36
CPSF4-209ENST00000465132 LYPLAL1Q5VWZ2 237 aa17.28■□□□□ 0.36
CPSF4-209ENST00000465132 RAET1GQ6H3X3 334 aa17.28■□□□□ 0.36
CPSF4-209ENST00000465132 GUSBP11Q6P575 273 aa17.28■□□□□ 0.36
CPSF4-209ENST00000465132 LMNTD2Q8IXW0 634 aa17.28■□□□□ 0.36
CPSF4-209ENST00000465132 FBXO25Q8TCJ0 367 aa17.28■□□□□ 0.36
CPSF4-209ENST00000465132 LMX1AQ8TE12 382 aa17.28■□□□□ 0.36
CPSF4-209ENST00000465132 HEXDCQ8WVB3 486 aa17.28■□□□□ 0.36
CPSF4-209ENST00000465132 CENPTQ96BT3 561 aa17.28■□□□□ 0.36
CPSF4-209ENST00000465132 ULK4Q96C45 1275 aa17.28■□□□□ 0.36
CPSF4-209ENST00000465132 FMO2Q99518 471 aa17.28■□□□□ 0.36
CPSF4-209ENST00000465132 EBNA1BP2Q99848 306 aaKnown RBP17.28■□□□□ 0.36
CPSF4-209ENST00000465132 SPATA16Q9BXB7 569 aa17.28■□□□□ 0.36
CPSF4-209ENST00000465132 ASCL3Q9NQ33 180 aa17.28■□□□□ 0.36
CPSF4-209ENST00000465132 PHPT1Q9NRX4 125 aaPredicted RBP17.28■□□□□ 0.36
CPSF4-209ENST00000465132 PIH1D1Q9NWS0 290 aaKnown RBP17.28■□□□□ 0.36
CPSF4-209ENST00000465132 BPTFQ12830 3046 aa17.27■□□□□ 0.36
CPSF4-209ENST00000465132 CPED1A4D0V7 1026 aa17.27■□□□□ 0.36
CPSF4-209ENST00000465132 EME2A4GXA9 379 aaPredicted RBP17.27■□□□□ 0.36
CPSF4-209ENST00000465132 TPP1O14773 563 aa17.27■□□□□ 0.36
CPSF4-209ENST00000465132 USP1O94782 785 aa17.27■□□□□ 0.36
CPSF4-209ENST00000465132 HOXC4P09017 264 aaPredicted RBP17.27■□□□□ 0.36
CPSF4-209ENST00000465132 GSTA2P09210 222 aa17.27■□□□□ 0.36
CPSF4-209ENST00000465132 BPIP17213 487 aa17.27■□□□□ 0.36
CPSF4-209ENST00000465132 PSMA3P25788 255 aa17.27■□□□□ 0.36
CPSF4-209ENST00000465132 THOP1P52888 689 aa17.27■□□□□ 0.36
CPSF4-209ENST00000465132 PDIA2Q13087 525 aaKnown RBP17.27■□□□□ 0.36
CPSF4-209ENST00000465132 SLMAPQ14BN4 828 aa17.27■□□□□ 0.36
CPSF4-209ENST00000465132 BROXQ5VW32 411 aa17.27■□□□□ 0.36
CPSF4-209ENST00000465132 PNCKQ6P2M8 343 aa17.27■□□□□ 0.36
CPSF4-209ENST00000465132 AFTPHQ6ULP2 937 aa17.27■□□□□ 0.36
CPSF4-209ENST00000465132 PCSK4Q6UW60 755 aa17.27■□□□□ 0.36
CPSF4-209ENST00000465132 EFL1Q7Z2Z2 1120 aaKnown RBP17.27■□□□□ 0.36
CPSF4-209ENST00000465132 PYROXD1Q8WU10 500 aa17.27■□□□□ 0.36
CPSF4-209ENST00000465132 BTN2A2Q8WVV5 523 aa17.27■□□□□ 0.36
CPSF4-209ENST00000465132 SGSM3Q96HU1 749 aa17.27■□□□□ 0.36
CPSF4-209ENST00000465132 ZCCHC2Q9C0B9 1178 aaKnown RBP17.27■□□□□ 0.36
CPSF4-209ENST00000465132 ABCG8Q9H221 673 aa17.27■□□□□ 0.36
CPSF4-209ENST00000465132 WDR26Q9H7D7 661 aa17.27■□□□□ 0.36
CPSF4-209ENST00000465132 CHRAC1Q9NRG0 131 aa17.27■□□□□ 0.36
CPSF4-209ENST00000465132 THSD1Q9NS62 852 aa17.27■□□□□ 0.36
CPSF4-209ENST00000465132 SYBUQ9NX95 663 aa17.27■□□□□ 0.36
CPSF4-209ENST00000465132 SPASTQ9UBP0 616 aa17.27■□□□□ 0.36
CPSF4-209ENST00000465132 ZC3H7BQ9UGR2 993 aaKnown RBP17.27■□□□□ 0.36
CPSF4-209ENST00000465132 COQ6Q9Y2Z9 468 aa17.27■□□□□ 0.36
CPSF4-209ENST00000465132 ESYT3A0FGR9 886 aa17.26■□□□□ 0.35
CPSF4-209ENST00000465132 BHMG1C9JSJ3 638 aaPredicted RBP17.26■□□□□ 0.35
CPSF4-209ENST00000465132 E7ESA3 106 aa17.26■□□□□ 0.35
CPSF4-209ENST00000465132 AURKAO14965 403 aa17.26■□□□□ 0.35
CPSF4-209ENST00000465132 AVILO75366 819 aa17.26■□□□□ 0.35
CPSF4-209ENST00000465132 SPAG6O75602 509 aa17.26■□□□□ 0.35
CPSF4-209ENST00000465132 TNFRSF8P28908 595 aa17.26■□□□□ 0.35
CPSF4-209ENST00000465132 UCNP55089 124 aa17.26■□□□□ 0.35
CPSF4-209ENST00000465132 TMPRSS3P57727 454 aa17.26■□□□□ 0.35
CPSF4-209ENST00000465132 ACVR1Q04771 509 aa17.26■□□□□ 0.35
CPSF4-209ENST00000465132 DHX9Q08211 1270 aaKnown RBP17.26■□□□□ 0.35
CPSF4-209ENST00000465132 ILF2Q12905 390 aaKnown RBP17.26■□□□□ 0.35
CPSF4-209ENST00000465132 IRF4Q15306 451 aa17.26■□□□□ 0.35
CPSF4-209ENST00000465132 NR0B2Q15466 257 aa17.26■□□□□ 0.35
CPSF4-209ENST00000465132 WSCD2Q2TBF2 565 aa17.26■□□□□ 0.35
CPSF4-209ENST00000465132 SPANXN3Q5MJ09 141 aa17.26■□□□□ 0.35
CPSF4-209ENST00000465132 HENMT1Q5T8I9 393 aaKnown RBP17.26■□□□□ 0.35
CPSF4-209ENST00000465132 IGF2-ASQ6U949 168 aa17.26■□□□□ 0.35
CPSF4-209ENST00000465132 ADAMTSL4Q6UY14 1074 aa17.26■□□□□ 0.35
CPSF4-209ENST00000465132 CERS6Q6ZMG9 384 aa17.26■□□□□ 0.35
CPSF4-209ENST00000465132 TMEM135Q86UB9 458 aa17.26■□□□□ 0.35
CPSF4-209ENST00000465132 PALM2Q8IXS6 379 aa17.26■□□□□ 0.35
CPSF4-209ENST00000465132 RBFAQ8N0V3 343 aa17.26■□□□□ 0.35
CPSF4-209ENST00000465132 ZNF843Q8N446 348 aa17.26■□□□□ 0.35
CPSF4-209ENST00000465132 TP53I13Q8NBR0 393 aaPredicted RBP17.26■□□□□ 0.35
CPSF4-209ENST00000465132 CALML6Q8TD86 181 aa17.26■□□□□ 0.35
CPSF4-209ENST00000465132 KCNE4Q8WWG9 221 aa17.26■□□□□ 0.35
CPSF4-209ENST00000465132 SCG3Q8WXD2 468 aaKnown RBP17.26■□□□□ 0.35
CPSF4-209ENST00000465132 GRAMD1AQ96CP6 724 aa17.26■□□□□ 0.35
CPSF4-209ENST00000465132 CDKN2AIPNLQ96HQ2 116 aa17.26■□□□□ 0.35
CPSF4-209ENST00000465132 SIGLEC10Q96LC7 697 aa17.26■□□□□ 0.35
CPSF4-209ENST00000465132 TTC25Q96NG3 672 aa17.26■□□□□ 0.35
CPSF4-209ENST00000465132 VPS35Q96QK1 796 aa17.26■□□□□ 0.35
CPSF4-209ENST00000465132 RIOK2Q9BVS4 552 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms