RNA–Protein interactions for RNA: ENST00000463503.5

SSR3-202, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 596 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-202ENST00000463503 SPOCK2Q92563 424 aa11.07□□□□□ -0.64
SSR3-202ENST00000463503 ZNF592Q92610 1267 aa11.07□□□□□ -0.64
SSR3-202ENST00000463503 MAGOHBQ96A72 148 aaKnown RBP11.07□□□□□ -0.64
SSR3-202ENST00000463503 CAPZA3Q96KX2 299 aa11.07□□□□□ -0.64
SSR3-202ENST00000463503 TEKT5Q96M29 485 aa11.07□□□□□ -0.64
SSR3-202ENST00000463503 PPP1R2P1Q96PQ5 205 aa11.07□□□□□ -0.64
SSR3-202ENST00000463503 NUDCD1Q96RS6 583 aa11.07□□□□□ -0.64
SSR3-202ENST00000463503 AP1M1Q9BXS5 423 aa11.07□□□□□ -0.64
SSR3-202ENST00000463503 TMEM168Q9H0V1 697 aa11.07□□□□□ -0.64
SSR3-202ENST00000463503 OCIAD1Q9NX40 245 aa11.07□□□□□ -0.64
SSR3-202ENST00000463503 TMEM9Q9P0T7 183 aa11.07□□□□□ -0.64
SSR3-202ENST00000463503 KCNMB2Q9Y691 235 aa11.07□□□□□ -0.64
SSR3-202ENST00000463503 DIDO1Q9BTC0 2240 aaKnown RBP11.07□□□□□ -0.64
SSR3-202ENST00000463503 B4E171 279 aa11.06□□□□□ -0.64
SSR3-202ENST00000463503 KCNK1O00180 336 aa11.06□□□□□ -0.64
SSR3-202ENST00000463503 VPS4BO75351 444 aa11.06□□□□□ -0.64
SSR3-202ENST00000463503 STK10O94804 968 aaKnown RBP11.06□□□□□ -0.64
SSR3-202ENST00000463503 TNFP01375 233 aa11.06□□□□□ -0.64
SSR3-202ENST00000463503 JCHAINP01591 159 aa11.06□□□□□ -0.64
SSR3-202ENST00000463503 PCCBP05166 539 aa11.06□□□□□ -0.64
SSR3-202ENST00000463503 TIMP2P16035 220 aa11.06□□□□□ -0.64
SSR3-202ENST00000463503 TSPAN7P41732 249 aa11.06□□□□□ -0.64
SSR3-202ENST00000463503 KIAA1024LP59773 190 aa11.06□□□□□ -0.64
SSR3-202ENST00000463503 ZBTB17Q13105 803 aa11.06□□□□□ -0.64
SSR3-202ENST00000463503 TRA2AQ13595 282 aaKnown RBP eCLIP11.06□□□□□ -0.64
SSR3-202ENST00000463503 ZNF235Q14590 738 aa11.06□□□□□ -0.64
SSR3-202ENST00000463503 TMEM52BQ4KMG9 183 aa11.06□□□□□ -0.64
SSR3-202ENST00000463503 CCDC137Q6PK04 289 aaKnown RBP11.06□□□□□ -0.64
SSR3-202ENST00000463503 GDPD4Q6W3E5 623 aa11.06□□□□□ -0.64
SSR3-202ENST00000463503 SYDE1Q6ZW31 735 aaPredicted RBP11.06□□□□□ -0.64
SSR3-202ENST00000463503 MAMDC2Q7Z304 686 aaPredicted RBP11.06□□□□□ -0.64
SSR3-202ENST00000463503 TAF8Q7Z7C8 310 aa11.06□□□□□ -0.64
SSR3-202ENST00000463503 TTC7BQ86TV6 843 aa11.06□□□□□ -0.64
SSR3-202ENST00000463503 NLGN4XQ8N0W4 816 aa11.06□□□□□ -0.64
SSR3-202ENST00000463503 RYBPQ8N488 228 aaPredicted RBP11.06□□□□□ -0.64
SSR3-202ENST00000463503 CNTD1Q8N815 330 aa11.06□□□□□ -0.64
SSR3-202ENST00000463503 PLA2G15Q8NCC3 412 aa11.06□□□□□ -0.64
SSR3-202ENST00000463503 AGBL5Q8NDL9 886 aa11.06□□□□□ -0.64
SSR3-202ENST00000463503 MNS1Q8NEH6 495 aa11.06□□□□□ -0.64
SSR3-202ENST00000463503 NLGN4YQ8NFZ3 816 aaPredicted RBP11.06□□□□□ -0.64
SSR3-202ENST00000463503 OR4D9Q8NGE8 314 aa11.06□□□□□ -0.64
SSR3-202ENST00000463503 TADA1Q96BN2 335 aa11.06□□□□□ -0.64
SSR3-202ENST00000463503 GDAP1L1Q96MZ0 367 aa11.06□□□□□ -0.64
SSR3-202ENST00000463503 SPATA13Q96N96 652 aa11.06□□□□□ -0.64
SSR3-202ENST00000463503 TUBGCP5Q96RT8 1024 aa11.06□□□□□ -0.64
SSR3-202ENST00000463503 TMEM121Q9BTD3 319 aa11.06□□□□□ -0.64
SSR3-202ENST00000463503 CINPQ9BW66 212 aaPredicted RBP11.06□□□□□ -0.64
SSR3-202ENST00000463503 ASPSCR1Q9BZE9 553 aa11.06□□□□□ -0.64
SSR3-202ENST00000463503 POLR1EQ9GZS1 481 aaKnown RBP11.06□□□□□ -0.64
SSR3-202ENST00000463503 DPEP2Q9H4A9 486 aa11.06□□□□□ -0.64
SSR3-202ENST00000463503 ZNF768Q9H5H4 540 aaKnown RBP11.06□□□□□ -0.64
SSR3-202ENST00000463503 PRDM8Q9NQV8 689 aa11.06□□□□□ -0.64
SSR3-202ENST00000463503 RBM22Q9NW64 420 aaKnown RBP eCLIP11.06□□□□□ -0.64
SSR3-202ENST00000463503 SLC39A1Q9NY26 324 aa11.06□□□□□ -0.64
SSR3-202ENST00000463503 SMARCAL1Q9NZC9 954 aa11.06□□□□□ -0.64
SSR3-202ENST00000463503 VPS4AQ9UN37 437 aa11.06□□□□□ -0.64
SSR3-202ENST00000463503 ZNF148Q9UQR1 794 aa11.06□□□□□ -0.64
SSR3-202ENST00000463503 NEU2Q9Y3R4 380 aa11.06□□□□□ -0.64
SSR3-202ENST00000463503 MTORP42345 2549 aa11.06□□□□□ -0.64
SSR3-202ENST00000463503 MED13LQ71F56 2210 aa11.05□□□□□ -0.64
SSR3-202ENST00000463503 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.05□□□□□ -0.64
SSR3-202ENST00000463503 A0A1W2PQ67 120 aa11.05□□□□□ -0.64
SSR3-202ENST00000463503 EFCAB7A8K855 629 aa11.05□□□□□ -0.64
SSR3-202ENST00000463503 KCNN4O15554 427 aa11.05□□□□□ -0.64
SSR3-202ENST00000463503 POP4O95707 220 aaKnown RBP11.05□□□□□ -0.64
SSR3-202ENST00000463503 IGSF6O95976 241 aa11.05□□□□□ -0.64
SSR3-202ENST00000463503 HLA-DQB2P05538 268 aa11.05□□□□□ -0.64
SSR3-202ENST00000463503 ELAVL4P26378 380 aaKnown RBP11.05□□□□□ -0.64
SSR3-202ENST00000463503 ALDH4A1P30038 563 aa11.05□□□□□ -0.64
SSR3-202ENST00000463503 RAB15P59190 212 aa11.05□□□□□ -0.64
SSR3-202ENST00000463503 RHOAP61586 193 aa11.05□□□□□ -0.64
SSR3-202ENST00000463503 AP1S1P61966 158 aa11.05□□□□□ -0.64
SSR3-202ENST00000463503 RAD51Q06609 339 aa11.05□□□□□ -0.64
SSR3-202ENST00000463503 MTM1Q13496 603 aa11.05□□□□□ -0.64
SSR3-202ENST00000463503 SEPT6Q14141 434 aa11.05□□□□□ -0.64
SSR3-202ENST00000463503 DHX34Q14147 1143 aaKnown RBP11.05□□□□□ -0.64
SSR3-202ENST00000463503 MYLK3Q32MK0 819 aa11.05□□□□□ -0.64
SSR3-202ENST00000463503 ANKRD20A2Q5SQ80 823 aa11.05□□□□□ -0.64
SSR3-202ENST00000463503 DCAF12Q5T6F0 453 aa11.05□□□□□ -0.64
SSR3-202ENST00000463503 ANKRD20A1Q5TYW2 823 aa11.05□□□□□ -0.64
SSR3-202ENST00000463503 ANKRD20A3Q5VUR7 823 aa11.05□□□□□ -0.64
SSR3-202ENST00000463503 NKAIN2Q5VXU1 208 aa11.05□□□□□ -0.64
SSR3-202ENST00000463503 ITPRIPL1Q6GPH6 555 aa11.05□□□□□ -0.64
SSR3-202ENST00000463503 TTC27Q6P3X3 843 aa11.05□□□□□ -0.64
SSR3-202ENST00000463503 NRROSQ86YC3 692 aa11.05□□□□□ -0.64
SSR3-202ENST00000463503 ZNF567Q8N184 647 aa11.05□□□□□ -0.64
SSR3-202ENST00000463503 PGBD5Q8N414 524 aa11.05□□□□□ -0.64
SSR3-202ENST00000463503 CEP112Q8N8E3 955 aa11.05□□□□□ -0.64
SSR3-202ENST00000463503 TEX19Q8NA77 164 aa11.05□□□□□ -0.64
SSR3-202ENST00000463503 TSEN2Q8NCE0 465 aaKnown RBP11.05□□□□□ -0.64
SSR3-202ENST00000463503 OR56A4Q8NGH8 313 aa11.05□□□□□ -0.64
SSR3-202ENST00000463503 CCHCR1Q8TD31 782 aa11.05□□□□□ -0.64
SSR3-202ENST00000463503 HCAR2Q8TDS4 363 aa11.05□□□□□ -0.64
SSR3-202ENST00000463503 KIAA1143Q96AT1 154 aaPredicted RBP11.05□□□□□ -0.64
SSR3-202ENST00000463503 IMP4Q96G21 291 aaKnown RBP11.05□□□□□ -0.64
SSR3-202ENST00000463503 FCRL5Q96RD9 977 aa11.05□□□□□ -0.64
SSR3-202ENST00000463503 FAM118BQ9BPY3 351 aa11.05□□□□□ -0.64
SSR3-202ENST00000463503 SLC25A51Q9H1U9 297 aa11.05□□□□□ -0.64
SSR3-202ENST00000463503 GLOD4Q9HC38 313 aa11.05□□□□□ -0.64
SSR3-202ENST00000463503 PCDH9Q9HC56 1237 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms