RNA–Protein interactions for RNA: ENST00000462400.1

TNRC6A-204, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 2,550 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-204ENST00000462400 NTHL1P78549 312 aa11.92□□□□□ -0.5
TNRC6A-204ENST00000462400 PARP15Q460N3 678 aa11.92□□□□□ -0.5
TNRC6A-204ENST00000462400 RNF219Q5W0B1 726 aaPredicted RBP11.92□□□□□ -0.5
TNRC6A-204ENST00000462400 KDELC1Q6UW63 502 aa11.92□□□□□ -0.5
TNRC6A-204ENST00000462400 LAYNQ6UX15 382 aa11.92□□□□□ -0.5
TNRC6A-204ENST00000462400 TPGS1Q6ZTW0 290 aa11.92□□□□□ -0.5
TNRC6A-204ENST00000462400 CCDC80Q76M96 950 aa11.92□□□□□ -0.5
TNRC6A-204ENST00000462400 CLEC14AQ86T13 490 aa11.92□□□□□ -0.5
TNRC6A-204ENST00000462400 ITIH5Q86UX2 942 aa11.92□□□□□ -0.5
TNRC6A-204ENST00000462400 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.92□□□□□ -0.5
TNRC6A-204ENST00000462400 ACVR1CQ8NER5 493 aa11.92□□□□□ -0.5
TNRC6A-204ENST00000462400 ITPKCQ96DU7 683 aa11.92□□□□□ -0.5
TNRC6A-204ENST00000462400 SMIM14Q96QK8 99 aa11.92□□□□□ -0.5
TNRC6A-204ENST00000462400 DOK1Q99704 481 aa11.92□□□□□ -0.5
TNRC6A-204ENST00000462400 ADI1Q9BV57 179 aa11.92□□□□□ -0.5
TNRC6A-204ENST00000462400 LRRC3Q9BY71 257 aa11.92□□□□□ -0.5
TNRC6A-204ENST00000462400 SLC25A51Q9H1U9 297 aa11.92□□□□□ -0.5
TNRC6A-204ENST00000462400 MRPL40Q9NQ50 206 aaKnown RBP11.92□□□□□ -0.5
TNRC6A-204ENST00000462400 IARS2Q9NSE4 1012 aaKnown RBP11.92□□□□□ -0.5
TNRC6A-204ENST00000462400 GNPTGQ9UJJ9 305 aa11.92□□□□□ -0.5
TNRC6A-204ENST00000462400 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 CLASP2O75122 1294 aaKnown RBP11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 ESRRBO95718 433 aa11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 PIRTP0C851 137 aa11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 EPCAMP16422 314 aa11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 MZF1P28698 734 aaPredicted RBP11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 GRIA3P42263 894 aa11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 CDH4P55283 916 aa11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 IL10RBQ08334 325 aa11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 ZNF177Q13360 481 aaPredicted RBP11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 CAMK1Q14012 370 aa11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 ZNF235Q14590 738 aa11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 NEDD8Q15843 81 aa11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 ESRP1Q6NXG1 681 aaKnown RBP11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 MRPL43Q8N983 215 aaKnown RBP11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 ARRDC2Q8TBH0 407 aa11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 CANT1Q8WVQ1 401 aa11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 CYGBQ8WWM9 190 aa11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 HERVK_113Q902F9 699 aa11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 MRPS31Q92665 395 aaKnown RBP11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 ISL2Q96A47 359 aa11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 IMP4Q96G21 291 aaKnown RBP11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 SCYL1Q96KG9 808 aa11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 UHRF1Q96T88 793 aaPredicted RBP11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 TCF12Q99081 682 aa11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 NAT9Q9BTE0 207 aa11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 MUC3BQ9H195 1237 aa11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 CCDC68Q9H2F9 335 aa11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 ATP13A1Q9HD20 1204 aa11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 CFAP97Q9P2B7 532 aa11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 VTI1BQ9UEU0 232 aa11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 CCL26Q9Y258 94 aa11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 FIS1Q9Y3D6 152 aa11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 GPC6Q9Y625 555 aaPredicted RBP11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 DENND4CQ5VZ89 1909 aa11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 C1orf232A0A0U1RR37 186 aa11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 FAM149AA5PLN7 773 aa11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 DLGAP1O14490 977 aa11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 TRIM24O15164 1050 aa11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 GREM1O60565 184 aa11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 NOL3O60936 208 aaKnown RBP11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 ARSAP15289 507 aa11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 MYF6P23409 242 aa11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 NME5P56597 212 aa11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 MERTKQ12866 999 aa11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 GALNT3Q14435 633 aa11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 SPANXN3Q5MJ09 141 aa11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 CXorf57Q6NSI4 855 aaKnown RBP11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 KCTD8Q6ZWB6 473 aa11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 TMEM135Q86UB9 458 aa11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 ZC3H7AQ8IWR0 971 aaKnown RBP11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 BBS7Q8IWZ6 715 aa11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 OFCC1Q8IZS5 231 aa11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 ANKFN1Q8N957 763 aa11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 SNX31Q8N9S9 440 aa11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 SP7Q8TDD2 431 aaPredicted RBP11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 IL22Q9GZX6 179 aa11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 PDFQ9HBH1 243 aa11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 TLR9Q9NR96 1032 aa11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 CACNA2D2Q9NY47 1150 aa11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 UTP6Q9NYH9 597 aaKnown RBP11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 GMPR2Q9P2T1 348 aaKnown RBP11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 CLEC4EQ9ULY5 219 aa11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 AURKCQ9UQB9 309 aa11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 ERGIC3Q9Y282 383 aa11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 CHD5Q8TDI0 1954 aa11.91□□□□□ -0.5
TNRC6A-204ENST00000462400 SLCO1B7G3V0H7 640 aa11.9□□□□□ -0.5
TNRC6A-204ENST00000462400 H0Y626 953 aa11.9□□□□□ -0.5
TNRC6A-204ENST00000462400 TPST1O60507 370 aa11.9□□□□□ -0.5
TNRC6A-204ENST00000462400 C1RP00736 705 aa11.9□□□□□ -0.5
TNRC6A-204ENST00000462400 MAP4P27816 1152 aaKnown RBP11.9□□□□□ -0.5
TNRC6A-204ENST00000462400 NPY2RP49146 381 aa11.9□□□□□ -0.5
TNRC6A-204ENST00000462400 YBEYP58557 167 aaPredicted RBP11.9□□□□□ -0.5
TNRC6A-204ENST00000462400 TRAP1Q12931 704 aaKnown RBP11.9□□□□□ -0.5
TNRC6A-204ENST00000462400 C5orf22Q49AR2 442 aa11.9□□□□□ -0.5
TNRC6A-204ENST00000462400 PITRM1Q5JRX3 1037 aa11.9□□□□□ -0.5
TNRC6A-204ENST00000462400 C6orf10Q5SRN2 563 aa11.9□□□□□ -0.5
TNRC6A-204ENST00000462400 REP15Q6BDI9 236 aa11.9□□□□□ -0.5
TNRC6A-204ENST00000462400 GALNT18Q6P9A2 607 aa11.9□□□□□ -0.5
TNRC6A-204ENST00000462400 RANBP10Q6VN20 620 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms