RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 HK1P19367 917 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 TYMPP19971 482 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 WARSP23381 471 aaKnown RBP4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 BDNFP23560 247 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 ZFP36P26651 326 aaKnown RBP4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 PPP1R2P41236 205 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 PGFP49763 221 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 NDUFV1P49821 464 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 ZNF132P52740 706 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 COPAP53621 1224 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 PTTG1IPP53801 180 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 RAD23BP54727 409 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 ARPC4P59998 168 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 UBE3AQ05086 875 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 NSUN2Q08J23 767 aaKnown RBP eCLIP4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 TCF15Q12870 199 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 MYO1EQ12965 1108 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 TBX2Q13207 712 aaPredicted RBP4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 CUL2Q13617 745 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 KCNC3Q14003 757 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 SLC29A2Q14542 456 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 E2F5Q15329 346 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 SGSM1Q2NKQ1 1148 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 FAM214AQ32MH5 1076 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 CMPK2Q5EBM0 449 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 ATXN7L2Q5T6C5 722 aaPredicted RBP4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 FAAH2Q6GMR7 532 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 ANKRD54Q6NXT1 300 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 TRIM65Q6PJ69 517 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 PACS1Q6VY07 963 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 SCN4BQ8IWT1 228 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 LMNTD2Q8IXW0 634 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 C17orf53Q8N3J3 647 aaPredicted RBP4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 SLC4A11Q8NBS3 891 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 FAM46DQ8NEK8 389 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 TMIEQ8NEW7 156 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 GPR150Q8NGU9 434 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 ZFP28Q8NHY6 868 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 UBA3Q8TBC4 463 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 CPT1CQ8TCG5 803 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 SLC2A14Q8TDB8 520 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 TRPC4APQ8TEL6 797 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 ING5Q8WYH8 240 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 NDRG1Q92597 394 aaKnown RBP4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 ZNF707Q96C28 371 aaPredicted RBP4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 LRRC45Q96CN5 670 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 TCEAL4Q96EI5 215 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 MYEOVQ96EZ4 313 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 ZNF560Q96MR9 790 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 SMC6Q96SB8 1091 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 KCNK16Q96T55 309 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 TSC22D3Q99576 134 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 SEPT5Q99719 369 aaPredicted RBP4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 FAM167BQ9BTA0 163 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 SPATA5L1Q9BVQ7 753 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 SLC46A2Q9BY10 475 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 IMPG2Q9BZV3 1241 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 XPO4Q9C0E2 1151 aaKnown RBP4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 GPR88Q9GZN0 384 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 ZCWPW1Q9H0M4 648 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 LMAN2LQ9H0V9 348 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 GANQ9H2C0 597 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 VCX3BQ9H321 246 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 SNX25Q9H3E2 840 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 UBE2ZQ9H832 354 aaPredicted RBP4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 CYP4F11Q9HBI6 524 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 ZNF334Q9HCZ1 680 aaPredicted RBP4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 CISHQ9NSE2 258 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 FAM207AQ9NSI2 230 aaPredicted RBP4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 KLC4Q9NSK0 619 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 ZNHIT6Q9NWK9 470 aaKnown RBP4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 IL20Q9NYY1 176 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 LIMA1Q9UHB6 759 aaKnown RBP4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 DNAJC12Q9UKB3 198 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 COQ4Q9Y3A0 265 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 TNFRSF18Q9Y5U5 241 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 ZFYVE26Q68DK2 2539 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 DOCK8Q8NF50 2099 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 ASPMQ8IZT6 3477 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 CCDC195A0A1B0GUA6 201 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 A0A1B0GVC2 190 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 CDHR4A6H8M9 788 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 E9PLN8 166 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 RAB27BO00194 218 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 EIF3FO00303 357 aaPredicted RBP4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 ZSCAN12O43309 604 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 MGRN1O60291 552 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 ZNF189O75820 626 aaPredicted RBP4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 INMTO95050 263 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 SCAF4O95104 1147 aaKnown RBP4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 TNFRSF6BO95407 300 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 FGFR1OPO95684 399 aaKnown RBP4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 GLUD1P00367 558 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 KRT5P13647 590 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 IL9P15248 144 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 CD19P15391 556 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 FDXRP22570 491 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 GTF2H1P32780 548 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 PNPLA4P41247 253 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms