RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 ZNF622Q969S3 477 aaKnown RBP eCLIP3.34□□□□□ -1.87
RFC4-211ENST00000460408 C3orf30Q96M34 536 aa3.34□□□□□ -1.87
RFC4-211ENST00000460408 KIFC3Q9BVG8 833 aa3.34□□□□□ -1.87
RFC4-211ENST00000460408 MRPL1Q9BYD6 325 aaKnown RBP3.34□□□□□ -1.87
RFC4-211ENST00000460408 SEZ6LQ9BYH1 1024 aa3.34□□□□□ -1.87
RFC4-211ENST00000460408 OSGEPL1Q9H4B0 414 aa3.34□□□□□ -1.87
RFC4-211ENST00000460408 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.34□□□□□ -1.87
RFC4-211ENST00000460408 ARHGEF38Q9NXL2 777 aa3.34□□□□□ -1.87
RFC4-211ENST00000460408 ZNF224Q9NZL3 707 aa3.34□□□□□ -1.87
RFC4-211ENST00000460408 FBXL2Q9UKC9 423 aa3.34□□□□□ -1.87
RFC4-211ENST00000460408 WBP11Q9Y2W2 641 aaKnown RBP3.34□□□□□ -1.87
RFC4-211ENST00000460408 NFS1Q9Y697 457 aa3.34□□□□□ -1.87
RFC4-211ENST00000460408 FAM169AQ9Y6X4 670 aa3.34□□□□□ -1.87
RFC4-211ENST00000460408 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.34□□□□□ -1.87
RFC4-211ENST00000460408 LAMC3Q9Y6N6 1575 aa3.34□□□□□ -1.88
RFC4-211ENST00000460408 CKAP5Q14008 2032 aa3.33□□□□□ -1.88
RFC4-211ENST00000460408 ZNF587BE7ETH6 402 aa3.33□□□□□ -1.88
RFC4-211ENST00000460408 ZNF217O75362 1048 aa3.33□□□□□ -1.88
RFC4-211ENST00000460408 AVILO75366 819 aa3.33□□□□□ -1.88
RFC4-211ENST00000460408 RSL1D1O76021 490 aaKnown RBP3.33□□□□□ -1.88
RFC4-211ENST00000460408 PMS2P2O95744 297 aa3.33□□□□□ -1.88
RFC4-211ENST00000460408 GH2P01242 217 aa3.33□□□□□ -1.88
RFC4-211ENST00000460408 DNTTP04053 509 aa3.33□□□□□ -1.88
RFC4-211ENST00000460408 NGFRP08138 427 aa3.33□□□□□ -1.88
RFC4-211ENST00000460408 HRH2P25021 359 aa3.33□□□□□ -1.88
RFC4-211ENST00000460408 CORO1AP31146 461 aaKnown RBP3.33□□□□□ -1.88
RFC4-211ENST00000460408 STAT2P52630 851 aa3.33□□□□□ -1.88
RFC4-211ENST00000460408 TUBA1BP68363 451 aa3.33□□□□□ -1.88
RFC4-211ENST00000460408 DLG1Q12959 904 aa3.33□□□□□ -1.88
RFC4-211ENST00000460408 BMP2KLQ5H9B9 411 aa3.33□□□□□ -1.88
RFC4-211ENST00000460408 MFSD4BQ5TF39 518 aa3.33□□□□□ -1.88
RFC4-211ENST00000460408 RPUSD3Q6P087 351 aaKnown RBP3.33□□□□□ -1.88
RFC4-211ENST00000460408 FAM122CQ6P4D5 195 aa3.33□□□□□ -1.88
RFC4-211ENST00000460408 PDXDC1Q6P996 788 aa3.33□□□□□ -1.88
RFC4-211ENST00000460408 KRBA2Q6ZNG9 492 aa3.33□□□□□ -1.88
RFC4-211ENST00000460408 C18orf65Q6ZTR6 163 aa3.33□□□□□ -1.88
RFC4-211ENST00000460408 DENND5BQ6ZUT9 1274 aa3.33□□□□□ -1.88
RFC4-211ENST00000460408 Q75L30 129 aa3.33□□□□□ -1.88
RFC4-211ENST00000460408 CCDC190Q86UF4 302 aa3.33□□□□□ -1.88
RFC4-211ENST00000460408 DNAAF5Q86Y56 855 aa3.33□□□□□ -1.88
RFC4-211ENST00000460408 SLC44A1Q8WWI5 657 aa3.33□□□□□ -1.88
RFC4-211ENST00000460408 NEUROG1Q92886 237 aa3.33□□□□□ -1.88
RFC4-211ENST00000460408 ABTB1Q969K4 478 aaPredicted RBP3.33□□□□□ -1.88
RFC4-211ENST00000460408 MOAP1Q96BY2 351 aa3.33□□□□□ -1.88
RFC4-211ENST00000460408 THOC3Q96J01 351 aaKnown RBP3.33□□□□□ -1.88
RFC4-211ENST00000460408 SLC22A12Q96S37 553 aa3.33□□□□□ -1.88
RFC4-211ENST00000460408 MTERF1Q99551 399 aaKnown RBP3.33□□□□□ -1.88
RFC4-211ENST00000460408 TXLNGYQ9BZA5 131 aa3.33□□□□□ -1.88
RFC4-211ENST00000460408 DNAJC18Q9H819 358 aa3.33□□□□□ -1.88
RFC4-211ENST00000460408 TMEM30AQ9NV96 361 aa3.33□□□□□ -1.88
RFC4-211ENST00000460408 PSD3Q9NYI0 1048 aa3.33□□□□□ -1.88
RFC4-211ENST00000460408 SMARCAL1Q9NZC9 954 aa3.33□□□□□ -1.88
RFC4-211ENST00000460408 SIX4Q9UIU6 781 aa3.33□□□□□ -1.88
RFC4-211ENST00000460408 TSPYL4Q9UJ04 414 aa3.33□□□□□ -1.88
RFC4-211ENST00000460408 ZNF148Q9UQR1 794 aa3.33□□□□□ -1.88
RFC4-211ENST00000460408 KLHL20Q9Y2M5 609 aa3.33□□□□□ -1.88
RFC4-211ENST00000460408 MAGED1Q9Y5V3 778 aaPredicted RBP3.33□□□□□ -1.88
RFC4-211ENST00000460408 MRC2Q9UBG0 1479 aa3.33□□□□□ -1.88
RFC4-211ENST00000460408 SPATA31D1Q6ZQQ2 1576 aa3.33□□□□□ -1.88
RFC4-211ENST00000460408 LOC100509620A0A075B734 347 aa3.32□□□□□ -1.88
RFC4-211ENST00000460408 GPR75-ASB3A0A0A6YYF3 556 aa3.32□□□□□ -1.88
RFC4-211ENST00000460408 SYNDIG1LA6NDD5 238 aa3.32□□□□□ -1.88
RFC4-211ENST00000460408 LILRA5A6NI73 299 aa3.32□□□□□ -1.88
RFC4-211ENST00000460408 UBE2CO00762 179 aa3.32□□□□□ -1.88
RFC4-211ENST00000460408 HS3ST1O14792 307 aa3.32□□□□□ -1.88
RFC4-211ENST00000460408 CREG1O75629 220 aa3.32□□□□□ -1.88
RFC4-211ENST00000460408 WISP2O76076 250 aa3.32□□□□□ -1.88
RFC4-211ENST00000460408 PPP1R3DO95685 299 aa3.32□□□□□ -1.88
RFC4-211ENST00000460408 AFPP02771 609 aaKnown RBP3.32□□□□□ -1.88
RFC4-211ENST00000460408 KCNA5P22460 613 aa3.32□□□□□ -1.88
RFC4-211ENST00000460408 KRT20P35900 424 aa3.32□□□□□ -1.88
RFC4-211ENST00000460408 CDKN2AP42771 156 aaKnown RBP3.32□□□□□ -1.88
RFC4-211ENST00000460408 TMF1P82094 1093 aa3.32□□□□□ -1.88
RFC4-211ENST00000460408 TNFAIP1Q13829 316 aa3.32□□□□□ -1.88
RFC4-211ENST00000460408 GPR139Q6DWJ6 353 aa3.32□□□□□ -1.88
RFC4-211ENST00000460408 NAA16Q6N069 864 aaPredicted RBP3.32□□□□□ -1.88
RFC4-211ENST00000460408 SLC30A6Q6NXT4 461 aa3.32□□□□□ -1.88
RFC4-211ENST00000460408 TMCO3Q6UWJ1 677 aa3.32□□□□□ -1.88
RFC4-211ENST00000460408 ZNF534Q76KX8 674 aa3.32□□□□□ -1.88
RFC4-211ENST00000460408 RBM23Q86U06 439 aaKnown RBP3.32□□□□□ -1.88
RFC4-211ENST00000460408 ADIPOR2Q86V24 386 aa3.32□□□□□ -1.88
RFC4-211ENST00000460408 SATL1Q86VE3 508 aa3.32□□□□□ -1.88
RFC4-211ENST00000460408 GALNT13Q8IUC8 556 aa3.32□□□□□ -1.88
RFC4-211ENST00000460408 SPATA2LQ8IUW3 424 aaPredicted RBP3.32□□□□□ -1.88
RFC4-211ENST00000460408 ADHFE1Q8IWW8 467 aa3.32□□□□□ -1.88
RFC4-211ENST00000460408 PM20D2Q8IYS1 436 aa3.32□□□□□ -1.88
RFC4-211ENST00000460408 TMTC2Q8N394 836 aa3.32□□□□□ -1.88
RFC4-211ENST00000460408 GCSAMQ8N6F7 178 aa3.32□□□□□ -1.88
RFC4-211ENST00000460408 EMC1Q8N766 993 aa3.32□□□□□ -1.88
RFC4-211ENST00000460408 SYT2Q8N9I0 419 aaPredicted RBP3.32□□□□□ -1.88
RFC4-211ENST00000460408 SLC20A1Q8WUM9 679 aa3.32□□□□□ -1.88
RFC4-211ENST00000460408 PIGTQ969N2 578 aa3.32□□□□□ -1.88
RFC4-211ENST00000460408 TMCO6Q96DC7 493 aa3.32□□□□□ -1.88
RFC4-211ENST00000460408 MTBPQ96DY7 904 aa3.32□□□□□ -1.88
RFC4-211ENST00000460408 QRFPRQ96P65 431 aa3.32□□□□□ -1.88
RFC4-211ENST00000460408 GCNAQ96QF7 691 aa3.32□□□□□ -1.88
RFC4-211ENST00000460408 OR1F2PQ96R84 312 aa3.32□□□□□ -1.88
RFC4-211ENST00000460408 DDOQ99489 341 aa3.32□□□□□ -1.88
RFC4-211ENST00000460408 TMEM204Q9BSN7 226 aa3.32□□□□□ -1.88
RFC4-211ENST00000460408 RTN4RQ9BZR6 473 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms