RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 EXD3Q8N9H8 876 aa22.44■■□□□ 1.18
PTPN4-207ENST00000460162 DTX3LQ8TDB6 740 aa22.44■■□□□ 1.18
PTPN4-207ENST00000460162 HTR3CQ8WXA8 447 aa22.44■■□□□ 1.18
PTPN4-207ENST00000460162 RTP4Q96DX8 246 aa22.44■■□□□ 1.18
PTPN4-207ENST00000460162 RBM41Q96IZ5 413 aaKnown RBP22.44■■□□□ 1.18
PTPN4-207ENST00000460162 ZPBPQ9BS86 351 aa22.44■■□□□ 1.18
PTPN4-207ENST00000460162 TBC1D10AQ9BXI6 508 aa22.44■■□□□ 1.18
PTPN4-207ENST00000460162 GOLPH3Q9H4A6 298 aa22.44■■□□□ 1.18
PTPN4-207ENST00000460162 POT1Q9NUX5 634 aa22.44■■□□□ 1.18
PTPN4-207ENST00000460162 HACD3Q9P035 362 aa22.44■■□□□ 1.18
PTPN4-207ENST00000460162 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.44■■□□□ 1.18
PTPN4-207ENST00000460162 PDZK1P1A8MUH7 402 aa22.43■■□□□ 1.18
PTPN4-207ENST00000460162 HACD1B0YJ81 288 aa22.43■■□□□ 1.18
PTPN4-207ENST00000460162 MTX2O75431 263 aa22.43■■□□□ 1.18
PTPN4-207ENST00000460162 CDK14O94921 469 aa22.43■■□□□ 1.18
PTPN4-207ENST00000460162 ZRANB2O95218 330 aaKnown RBP eCLIP22.43■■□□□ 1.18
PTPN4-207ENST00000460162 VIPP01282 170 aa22.43■■□□□ 1.18
PTPN4-207ENST00000460162 ADCY2Q08462 1091 aa22.43■■□□□ 1.18
PTPN4-207ENST00000460162 PPP2R5EQ16537 467 aa22.43■■□□□ 1.18
PTPN4-207ENST00000460162 KHDC1Q4VXA5 237 aaKnown RBP22.43■■□□□ 1.18
PTPN4-207ENST00000460162 ZC3H18Q86VM9 953 aaKnown RBP22.43■■□□□ 1.18
PTPN4-207ENST00000460162 CCDC50Q8IVM0 306 aa22.43■■□□□ 1.18
PTPN4-207ENST00000460162 ZNF547Q8IVP9 402 aa22.43■■□□□ 1.18
PTPN4-207ENST00000460162 TRIM48Q8IWZ4 208 aa22.43■■□□□ 1.18
PTPN4-207ENST00000460162 FCRL5Q96RD9 977 aa22.43■■□□□ 1.18
PTPN4-207ENST00000460162 BPIFA1Q9NP55 256 aa22.43■■□□□ 1.18
PTPN4-207ENST00000460162 LUC7LQ9NQ29 371 aaKnown RBP22.43■■□□□ 1.18
PTPN4-207ENST00000460162 FBXO8Q9NRD0 319 aa22.43■■□□□ 1.18
PTPN4-207ENST00000460162 SCHIP1Q9P0W5 487 aaPredicted RBP22.43■■□□□ 1.18
PTPN4-207ENST00000460162 SLC23A2Q9UGH3 650 aa22.43■■□□□ 1.18
PTPN4-207ENST00000460162 DNAJC16Q9Y2G8 782 aa22.43■■□□□ 1.18
PTPN4-207ENST00000460162 TLN1Q9Y490 2541 aaKnown RBP22.43■■□□□ 1.18
PTPN4-207ENST00000460162 SFTPCP11686 197 aa22.42■■□□□ 1.18
PTPN4-207ENST00000460162 LIFP15018 202 aa22.42■■□□□ 1.18
PTPN4-207ENST00000460162 VCLP18206 1134 aa22.42■■□□□ 1.18
PTPN4-207ENST00000460162 HLA-DPA1P20036 260 aa22.42■■□□□ 1.18
PTPN4-207ENST00000460162 SPAM1P38567 509 aa22.42■■□□□ 1.18
PTPN4-207ENST00000460162 MARCKSL1P49006 195 aa22.42■■□□□ 1.18
PTPN4-207ENST00000460162 MPP3Q13368 585 aa22.42■■□□□ 1.18
PTPN4-207ENST00000460162 GTF2H3Q13889 308 aa22.42■■□□□ 1.18
PTPN4-207ENST00000460162 NOMO1Q15155 1222 aa22.42■■□□□ 1.18
PTPN4-207ENST00000460162 LLGL1Q15334 1064 aa22.42■■□□□ 1.18
PTPN4-207ENST00000460162 ATP13A5Q4VNC0 1218 aa22.42■■□□□ 1.18
PTPN4-207ENST00000460162 SIRPB2Q5JXA9 342 aa22.42■■□□□ 1.18
PTPN4-207ENST00000460162 AGAP9Q5VTM2 703 aa22.42■■□□□ 1.18
PTPN4-207ENST00000460162 ABRAXAS1Q6UWZ7 409 aa22.42■■□□□ 1.18
PTPN4-207ENST00000460162 WASH2PQ6VEQ5 465 aa22.42■■□□□ 1.18
PTPN4-207ENST00000460162 TMEM26Q6ZUK4 368 aa22.42■■□□□ 1.18
PTPN4-207ENST00000460162 CCDC170Q8IYT3 715 aa22.42■■□□□ 1.18
PTPN4-207ENST00000460162 RCOR2Q8IZ40 523 aa22.42■■□□□ 1.18
PTPN4-207ENST00000460162 ZNF567Q8N184 647 aa22.42■■□□□ 1.18
PTPN4-207ENST00000460162 TTC30BQ8N4P2 665 aa22.42■■□□□ 1.18
PTPN4-207ENST00000460162 OXNAD1Q96HP4 312 aaPredicted RBP22.42■■□□□ 1.18
PTPN4-207ENST00000460162 MRGPRX2Q96LB1 330 aa22.42■■□□□ 1.18
PTPN4-207ENST00000460162 SLC12A9Q9BXP2 914 aa22.42■■□□□ 1.18
PTPN4-207ENST00000460162 ZCCHC2Q9C0B9 1178 aaKnown RBP22.42■■□□□ 1.18
PTPN4-207ENST00000460162 WASH6PQ9NQA3 447 aa22.42■■□□□ 1.18
PTPN4-207ENST00000460162 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP22.42■■□□□ 1.18
PTPN4-207ENST00000460162 KLHL3Q9UH77 587 aa22.42■■□□□ 1.18
PTPN4-207ENST00000460162 PILRAQ9UKJ1 303 aa22.42■■□□□ 1.18
PTPN4-207ENST00000460162 TMPRSS11EQ9UL52 423 aa22.42■■□□□ 1.18
PTPN4-207ENST00000460162 SPTA1P02549 2419 aa22.42■■□□□ 1.18
PTPN4-207ENST00000460162 C9P02748 559 aa22.41■■□□□ 1.18
PTPN4-207ENST00000460162 SLC19A1P41440 591 aa22.41■■□□□ 1.18
PTPN4-207ENST00000460162 SLC1A5Q15758 541 aa22.41■■□□□ 1.18
PTPN4-207ENST00000460162 SEPT7Q16181 437 aaKnown RBP22.41■■□□□ 1.18
PTPN4-207ENST00000460162 TBR1Q16650 682 aa22.41■■□□□ 1.18
PTPN4-207ENST00000460162 BBS12Q6ZW61 710 aa22.41■■□□□ 1.18
PTPN4-207ENST00000460162 PID1Q7Z2X4 250 aa22.41■■□□□ 1.18
PTPN4-207ENST00000460162 GLT6D1Q7Z4J2 308 aa22.41■■□□□ 1.18
PTPN4-207ENST00000460162 C11orf96Q7Z7L8 435 aa22.41■■□□□ 1.18
PTPN4-207ENST00000460162 TRAPPC5Q8IUR0 188 aa22.41■■□□□ 1.18
PTPN4-207ENST00000460162 RBM12BQ8IXT5 1001 aaKnown RBP22.41■■□□□ 1.18
PTPN4-207ENST00000460162 NLGN4XQ8N0W4 816 aa22.41■■□□□ 1.18
PTPN4-207ENST00000460162 NLGN4YQ8NFZ3 816 aaPredicted RBP22.41■■□□□ 1.18
PTPN4-207ENST00000460162 GDAP1Q8TB36 358 aa22.41■■□□□ 1.18
PTPN4-207ENST00000460162 BRSK1Q8TDC3 778 aa22.41■■□□□ 1.18
PTPN4-207ENST00000460162 HAUS1Q96CS2 278 aa22.41■■□□□ 1.18
PTPN4-207ENST00000460162 TRIM5Q9C035 493 aa22.41■■□□□ 1.18
PTPN4-207ENST00000460162 IL26Q9NPH9 171 aa22.41■■□□□ 1.18
PTPN4-207ENST00000460162 SIDT1Q9NXL6 827 aaKnown RBP22.41■■□□□ 1.18
PTPN4-207ENST00000460162 OGFRQ9NZT2 677 aa22.41■■□□□ 1.18
PTPN4-207ENST00000460162 ZNF624Q9P2J8 865 aaPredicted RBP22.41■■□□□ 1.18
PTPN4-207ENST00000460162 TRHDEQ9UKU6 1024 aa22.41■■□□□ 1.18
PTPN4-207ENST00000460162 ASH1LQ9NR48 2969 aaKnown RBP22.41■■□□□ 1.18
PTPN4-207ENST00000460162 APOC4-APOC2K7ER74 178 aa22.4■■□□□ 1.18
PTPN4-207ENST00000460162 TOX3O15405 576 aaPredicted RBP22.4■■□□□ 1.18
PTPN4-207ENST00000460162 CAPN5O15484 640 aaPredicted RBP22.4■■□□□ 1.18
PTPN4-207ENST00000460162 UBXN7O94888 489 aa22.4■■□□□ 1.18
PTPN4-207ENST00000460162 APOC2P02655 101 aa22.4■■□□□ 1.18
PTPN4-207ENST00000460162 FAM87AP0C7U9 286 aa22.4■■□□□ 1.18
PTPN4-207ENST00000460162 IDSP22304 550 aa22.4■■□□□ 1.18
PTPN4-207ENST00000460162 CHRNA4P43681 627 aa22.4■■□□□ 1.18
PTPN4-207ENST00000460162 GFERP55789 205 aa22.4■■□□□ 1.18
PTPN4-207ENST00000460162 CYP4F2P78329 520 aa22.4■■□□□ 1.18
PTPN4-207ENST00000460162 TMEM115Q12893 351 aaPredicted RBP22.4■■□□□ 1.18
PTPN4-207ENST00000460162 XRCC4Q13426 336 aa22.4■■□□□ 1.18
PTPN4-207ENST00000460162 SPA17Q15506 151 aa22.4■■□□□ 1.18
PTPN4-207ENST00000460162 IPMKQ8NFU5 416 aa22.4■■□□□ 1.18
PTPN4-207ENST00000460162 C9orf72Q96LT7 481 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms