RNA–Protein interactions for RNA: ENST00000459809.5

PHF1-206, Transcript of PHD finger protein 1, humanhuman

TSL 4

Gene PHF1, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-206ENST00000459809 LIPCP11150 499 aa12.9□□□□□ -0.34
PHF1-206ENST00000459809 PYGMP11217 842 aa12.9□□□□□ -0.34
PHF1-206ENST00000459809 ITIH1P19827 911 aa12.9□□□□□ -0.34
PHF1-206ENST00000459809 IDSP22304 550 aa12.9□□□□□ -0.34
PHF1-206ENST00000459809 CDC25BP30305 580 aa12.9□□□□□ -0.34
PHF1-206ENST00000459809 SPAM1P38567 509 aa12.9□□□□□ -0.34
PHF1-206ENST00000459809 TSPAN7P41732 249 aa12.9□□□□□ -0.34
PHF1-206ENST00000459809 MAPK10P53779 464 aa12.9□□□□□ -0.34
PHF1-206ENST00000459809 EIF3EP60228 445 aaKnown RBP12.9□□□□□ -0.34
PHF1-206ENST00000459809 PDE1BQ01064 536 aa12.9□□□□□ -0.34
PHF1-206ENST00000459809 ITGA9Q13797 1035 aa12.9□□□□□ -0.34
PHF1-206ENST00000459809 GTF2H3Q13889 308 aa12.9□□□□□ -0.34
PHF1-206ENST00000459809 ANKRD20A2Q5SQ80 823 aa12.9□□□□□ -0.34
PHF1-206ENST00000459809 LDLRAP1Q5SW96 308 aa12.9□□□□□ -0.34
PHF1-206ENST00000459809 ZNF648Q5T619 568 aaPredicted RBP12.9□□□□□ -0.34
PHF1-206ENST00000459809 ANKRD20A1Q5TYW2 823 aa12.9□□□□□ -0.34
PHF1-206ENST00000459809 AGAP9Q5VTM2 703 aa12.9□□□□□ -0.34
PHF1-206ENST00000459809 ANKRD20A3Q5VUR7 823 aa12.9□□□□□ -0.34
PHF1-206ENST00000459809 DARS2Q6PI48 645 aaKnown RBP12.9□□□□□ -0.34
PHF1-206ENST00000459809 ABRAXAS1Q6UWZ7 409 aa12.9□□□□□ -0.34
PHF1-206ENST00000459809 GLT6D1Q7Z4J2 308 aa12.9□□□□□ -0.34
PHF1-206ENST00000459809 RBM12BQ8IXT5 1001 aaKnown RBP12.9□□□□□ -0.34
PHF1-206ENST00000459809 GDAP1Q8TB36 358 aa12.9□□□□□ -0.34
PHF1-206ENST00000459809 BLOC1S5Q8TDH9 187 aa12.9□□□□□ -0.34
PHF1-206ENST00000459809 SLC39A7Q92504 469 aa12.9□□□□□ -0.34
PHF1-206ENST00000459809 LRRC45Q96CN5 670 aa12.9□□□□□ -0.34
PHF1-206ENST00000459809 ZCCHC2Q9C0B9 1178 aaKnown RBP12.9□□□□□ -0.34
PHF1-206ENST00000459809 BPIFA1Q9NP55 256 aa12.9□□□□□ -0.34
PHF1-206ENST00000459809 ARFGAP3Q9NP61 516 aa12.9□□□□□ -0.34
PHF1-206ENST00000459809 PRDM8Q9NQV8 689 aa12.9□□□□□ -0.34
PHF1-206ENST00000459809 SLC23A2Q9UGH3 650 aa12.9□□□□□ -0.34
PHF1-206ENST00000459809 FEZ2Q9UHY8 353 aaPredicted RBP12.9□□□□□ -0.34
PHF1-206ENST00000459809 SHROOM3Q8TF72 1996 aa12.9□□□□□ -0.34
PHF1-206ENST00000459809 RP1P56715 2156 aa12.9□□□□□ -0.34
PHF1-206ENST00000459809 PRAMEF33A0A0G2JMD5 474 aa12.89□□□□□ -0.35
PHF1-206ENST00000459809 GLYATL1P3A0A0U1RQE8 302 aa12.89□□□□□ -0.35
PHF1-206ENST00000459809 GRID2IPA4D2P6 1211 aa12.89□□□□□ -0.35
PHF1-206ENST00000459809 PRR19A6NJB7 356 aa12.89□□□□□ -0.35
PHF1-206ENST00000459809 C9orf172C9J069 976 aa12.89□□□□□ -0.35
PHF1-206ENST00000459809 STX7O15400 261 aaKnown RBP12.89□□□□□ -0.35
PHF1-206ENST00000459809 PRAMEF10O60809 474 aa12.89□□□□□ -0.35
PHF1-206ENST00000459809 AGTP01019 485 aa12.89□□□□□ -0.35
PHF1-206ENST00000459809 FGF3P11487 239 aaPredicted RBP12.89□□□□□ -0.35
PHF1-206ENST00000459809 CCL4P13236 92 aa12.89□□□□□ -0.35
PHF1-206ENST00000459809 LPOP22079 712 aaPredicted RBP12.89□□□□□ -0.35
PHF1-206ENST00000459809 ETV5P41161 510 aa12.89□□□□□ -0.35
PHF1-206ENST00000459809 CHRNA4P43681 627 aa12.89□□□□□ -0.35
PHF1-206ENST00000459809 NFATC2Q13469 925 aa12.89□□□□□ -0.35
PHF1-206ENST00000459809 TAF1AQ15573 450 aaPredicted RBP12.89□□□□□ -0.35
PHF1-206ENST00000459809 INSCQ1MX18 579 aa12.89□□□□□ -0.35
PHF1-206ENST00000459809 PEX26Q7Z412 305 aa12.89□□□□□ -0.35
PHF1-206ENST00000459809 ARHGAP22Q7Z5H3 698 aa12.89□□□□□ -0.35
PHF1-206ENST00000459809 DTX1Q86Y01 620 aa12.89□□□□□ -0.35
PHF1-206ENST00000459809 PLXDC1Q8IUK5 500 aa12.89□□□□□ -0.35
PHF1-206ENST00000459809 RNF10Q8N5U6 811 aaKnown RBP12.89□□□□□ -0.35
PHF1-206ENST00000459809 RCBTB1Q8NDN9 531 aa12.89□□□□□ -0.35
PHF1-206ENST00000459809 ACRBPQ8NEB7 543 aa12.89□□□□□ -0.35
PHF1-206ENST00000459809 NCSTNQ92542 709 aa12.89□□□□□ -0.35
PHF1-206ENST00000459809 ALG3Q92685 438 aa12.89□□□□□ -0.35
PHF1-206ENST00000459809 ZNF514Q96K75 400 aaPredicted RBP12.89□□□□□ -0.35
PHF1-206ENST00000459809 DDA1Q9BW61 102 aa12.89□□□□□ -0.35
PHF1-206ENST00000459809 OSGEPL1Q9H4B0 414 aa12.89□□□□□ -0.35
PHF1-206ENST00000459809 TMPRSS11EQ9UL52 423 aa12.89□□□□□ -0.35
PHF1-206ENST00000459809 COL27A1Q8IZC6 1860 aaPredicted RBP12.89□□□□□ -0.35
PHF1-206ENST00000459809 CACNA1GO43497 2377 aa12.88□□□□□ -0.35
PHF1-206ENST00000459809 MACROD2A1Z1Q3 448 aa12.88□□□□□ -0.35
PHF1-206ENST00000459809 KLHL33A6NCF5 533 aa12.88□□□□□ -0.35
PHF1-206ENST00000459809 LILRA5A6NI73 299 aa12.88□□□□□ -0.35
PHF1-206ENST00000459809 STMND1H3BQB6 276 aa12.88□□□□□ -0.35
PHF1-206ENST00000459809 KCNN4O15554 427 aa12.88□□□□□ -0.35
PHF1-206ENST00000459809 EFSO43281 561 aa12.88□□□□□ -0.35
PHF1-206ENST00000459809 MTX2O75431 263 aa12.88□□□□□ -0.35
PHF1-206ENST00000459809 CRTAMO95727 393 aa12.88□□□□□ -0.35
PHF1-206ENST00000459809 VIPP01282 170 aa12.88□□□□□ -0.35
PHF1-206ENST00000459809 PTMAP06454 111 aaKnown RBP12.88□□□□□ -0.35
PHF1-206ENST00000459809 CSF2RBP32927 897 aa12.88□□□□□ -0.35
PHF1-206ENST00000459809 ADRA1AP35348 466 aa12.88□□□□□ -0.35
PHF1-206ENST00000459809 PPM1FP49593 454 aaPredicted RBP12.88□□□□□ -0.35
PHF1-206ENST00000459809 RAB15P59190 212 aa12.88□□□□□ -0.35
PHF1-206ENST00000459809 UBE2IP63279 158 aaKnown RBP12.88□□□□□ -0.35
PHF1-206ENST00000459809 C19orf57Q0VDD7 668 aa12.88□□□□□ -0.35
PHF1-206ENST00000459809 CHRNA6Q15825 494 aa12.88□□□□□ -0.35
PHF1-206ENST00000459809 DCAF12Q5T6F0 453 aa12.88□□□□□ -0.35
PHF1-206ENST00000459809 CRTC3Q6UUV7 619 aa12.88□□□□□ -0.35
PHF1-206ENST00000459809 XKR5Q6UX68 686 aa12.88□□□□□ -0.35
PHF1-206ENST00000459809 TMEM26Q6ZUK4 368 aa12.88□□□□□ -0.35
PHF1-206ENST00000459809 AMZ2Q86W34 360 aa12.88□□□□□ -0.35
PHF1-206ENST00000459809 TMEM139Q8IV31 216 aa12.88□□□□□ -0.35
PHF1-206ENST00000459809 ZNF547Q8IVP9 402 aa12.88□□□□□ -0.35
PHF1-206ENST00000459809 TRIM48Q8IWZ4 208 aa12.88□□□□□ -0.35
PHF1-206ENST00000459809 ZSCAN1Q8NBB4 408 aa12.88□□□□□ -0.35
PHF1-206ENST00000459809 DDHD1Q8NEL9 900 aa12.88□□□□□ -0.35
PHF1-206ENST00000459809 ZNF398Q8TD17 642 aa12.88□□□□□ -0.35
PHF1-206ENST00000459809 SPATA13Q96N96 652 aa12.88□□□□□ -0.35
PHF1-206ENST00000459809 TEFMQ96QE5 360 aaKnown RBP12.88□□□□□ -0.35
PHF1-206ENST00000459809 ZPBPQ9BS86 351 aa12.88□□□□□ -0.35
PHF1-206ENST00000459809 C10orf88Q9H8K7 445 aa12.88□□□□□ -0.35
PHF1-206ENST00000459809 ARNT2Q9HBZ2 717 aa12.88□□□□□ -0.35
PHF1-206ENST00000459809 SMOXQ9NWM0 555 aa12.88□□□□□ -0.35
PHF1-206ENST00000459809 SLC39A1Q9NY26 324 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms