RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, human

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-223	ENST00000459783	ITGA9	Q13797	1035 aa		10.12	□□□□□ -0.79
MRPL55-223	ENST00000459783	DHX34	Q14147	1143 aa	Known RBP	10.12	□□□□□ -0.79
MRPL55-223	ENST00000459783	TRADD	Q15628	312 aa		10.12	□□□□□ -0.79
MRPL55-223	ENST00000459783	ZNF658B	Q4V348	819 aa	Predicted RBP	10.12	□□□□□ -0.79
MRPL55-223	ENST00000459783	HIBCH	Q6NVY1	386 aa	Predicted RBP	10.12	□□□□□ -0.79
MRPL55-223	ENST00000459783	LVRN	Q6Q4G3	990 aa		10.12	□□□□□ -0.79
MRPL55-223	ENST00000459783	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	10.12	□□□□□ -0.79
MRPL55-223	ENST00000459783	SYDE1	Q6ZW31	735 aa	Predicted RBP	10.12	□□□□□ -0.79
MRPL55-223	ENST00000459783	DET1	Q7L5Y6	550 aa		10.12	□□□□□ -0.79
MRPL55-223	ENST00000459783	CHST15	Q7LFX5	561 aa	Predicted RBP	10.12	□□□□□ -0.79
MRPL55-223	ENST00000459783	SNX20	Q7Z614	316 aa		10.12	□□□□□ -0.79
MRPL55-223	ENST00000459783	LDB1	Q86U70	411 aa	Predicted RBP	10.12	□□□□□ -0.79
MRPL55-223	ENST00000459783	GKN2	Q86XP6	184 aa		10.12	□□□□□ -0.79
MRPL55-223	ENST00000459783	IGDCC3	Q8IVU1	814 aa		10.12	□□□□□ -0.79
MRPL55-223	ENST00000459783	PPIL6	Q8IXY8	311 aa		10.12	□□□□□ -0.79
MRPL55-223	ENST00000459783	NAGS	Q8N159	534 aa		10.12	□□□□□ -0.79
MRPL55-223	ENST00000459783	LILRA3	Q8N6C8	439 aa	Predicted RBP	10.12	□□□□□ -0.79
MRPL55-223	ENST00000459783	BEND7	Q8N7W2	519 aa	Predicted RBP	10.12	□□□□□ -0.79
MRPL55-223	ENST00000459783	FAM46D	Q8NEK8	389 aa		10.12	□□□□□ -0.79
MRPL55-223	ENST00000459783	PPHLN1	Q8NEY8	458 aa	Known RBP	10.12	□□□□□ -0.79
MRPL55-223	ENST00000459783	GDAP1	Q8TB36	358 aa		10.12	□□□□□ -0.79
MRPL55-223	ENST00000459783	ZNF592	Q92610	1267 aa		10.12	□□□□□ -0.79
MRPL55-223	ENST00000459783	TRIM44	Q96DX7	344 aa	Predicted RBP	10.12	□□□□□ -0.79
MRPL55-223	ENST00000459783	SGF29	Q96ES7	293 aa		10.12	□□□□□ -0.79
MRPL55-223	ENST00000459783	TRIM31	Q9BZY9	425 aa		10.12	□□□□□ -0.79
MRPL55-223	ENST00000459783	IL22	Q9GZX6	179 aa		10.12	□□□□□ -0.79
MRPL55-223	ENST00000459783	RMI1	Q9H9A7	625 aa		10.12	□□□□□ -0.79
MRPL55-223	ENST00000459783	IL1RAPL1	Q9NZN1	696 aa		10.12	□□□□□ -0.79
MRPL55-223	ENST00000459783	BFAR	Q9NZS9	450 aa		10.12	□□□□□ -0.79
MRPL55-223	ENST00000459783	SCHIP1	Q9P0W5	487 aa	Predicted RBP	10.12	□□□□□ -0.79
MRPL55-223	ENST00000459783	TBC1D29	Q9UFV1	150 aa		10.12	□□□□□ -0.79
MRPL55-223	ENST00000459783	MRFAP1	Q9Y605	127 aa		10.12	□□□□□ -0.79
MRPL55-223	ENST00000459783	CACNA1B	Q00975	2339 aa		10.12	□□□□□ -0.79
MRPL55-223	ENST00000459783	ZCWPW2	A0A1B0GU75	182 aa		10.11	□□□□□ -0.79
MRPL55-223	ENST00000459783	OR1I1	O60431	355 aa		10.11	□□□□□ -0.79
MRPL55-223	ENST00000459783	SEC31A	O94979	1220 aa	Known RBP	10.11	□□□□□ -0.79
MRPL55-223	ENST00000459783	ADRB1	P08588	477 aa		10.11	□□□□□ -0.79
MRPL55-223	ENST00000459783	ALPPL2	P10696	532 aa		10.11	□□□□□ -0.79
MRPL55-223	ENST00000459783	BRAF	P15056	766 aa		10.11	□□□□□ -0.79
MRPL55-223	ENST00000459783	ZNF7	P17097	686 aa	Predicted RBP	10.11	□□□□□ -0.79
MRPL55-223	ENST00000459783	SPINK2	P20155	84 aa		10.11	□□□□□ -0.79
MRPL55-223	ENST00000459783	PML	P29590	882 aa		10.11	□□□□□ -0.79
MRPL55-223	ENST00000459783	ARCN1	P48444	511 aa	Known RBP	10.11	□□□□□ -0.79
MRPL55-223	ENST00000459783	ITGA8	P53708	1063 aa		10.11	□□□□□ -0.79
MRPL55-223	ENST00000459783	CACNG1	Q06432	222 aa		10.11	□□□□□ -0.79
MRPL55-223	ENST00000459783	ILF3	Q12906	894 aa	Known RBP eCLIP	10.11	□□□□□ -0.79
MRPL55-223	ENST00000459783	HLTF	Q14527	1009 aa	Known RBP eCLIP	10.11	□□□□□ -0.79
MRPL55-223	ENST00000459783	SKIDA1	Q1XH10	827 aa		10.11	□□□□□ -0.79
MRPL55-223	ENST00000459783	GPR33	Q49SQ1	333 aa		10.11	□□□□□ -0.79
MRPL55-223	ENST00000459783	CCDC157	Q569K6	752 aa		10.11	□□□□□ -0.79
MRPL55-223	ENST00000459783	ZRANB3	Q5FWF4	1079 aa		10.11	□□□□□ -0.79
MRPL55-223	ENST00000459783	LDLRAP1	Q5SW96	308 aa		10.11	□□□□□ -0.79
MRPL55-223	ENST00000459783	TMEM220	Q6QAJ8	160 aa		10.11	□□□□□ -0.79
MRPL55-223	ENST00000459783	DHRS13	Q6UX07	377 aa		10.11	□□□□□ -0.79
MRPL55-223	ENST00000459783	RAB44	Q7Z6P3	723 aa	Predicted RBP	10.11	□□□□□ -0.79
MRPL55-223	ENST00000459783	LRRTM4	Q86VH4	590 aa		10.11	□□□□□ -0.79
MRPL55-223	ENST00000459783	SPNS2	Q8IVW8	549 aa		10.11	□□□□□ -0.79
MRPL55-223	ENST00000459783	UNC5B	Q8IZJ1	945 aa		10.11	□□□□□ -0.79
MRPL55-223	ENST00000459783	SDR16C5	Q8N3Y7	309 aa		10.11	□□□□□ -0.79
MRPL55-223	ENST00000459783	CLDN19	Q8N6F1	224 aa		10.11	□□□□□ -0.79
MRPL55-223	ENST00000459783	ARL10	Q8N8L6	244 aa		10.11	□□□□□ -0.79
MRPL55-223	ENST00000459783	NOA1	Q8NC60	698 aa	Known RBP	10.11	□□□□□ -0.79
MRPL55-223	ENST00000459783	ADAMTS14	Q8WXS8	1223 aa		10.11	□□□□□ -0.79
MRPL55-223	ENST00000459783	PEX13	Q92968	403 aa		10.11	□□□□□ -0.79
MRPL55-223	ENST00000459783	DUSP23	Q9BVJ7	150 aa		10.11	□□□□□ -0.79
MRPL55-223	ENST00000459783	GSDMC	Q9BYG8	508 aa		10.11	□□□□□ -0.79
MRPL55-223	ENST00000459783	MRM3	Q9HC36	420 aa	Known RBP	10.11	□□□□□ -0.79
MRPL55-223	ENST00000459783	XAB2	Q9HCS7	855 aa	Known RBP	10.11	□□□□□ -0.79
MRPL55-223	ENST00000459783	PRDM8	Q9NQV8	689 aa		10.11	□□□□□ -0.79
MRPL55-223	ENST00000459783	ZDHHC3	Q9NYG2	299 aa		10.11	□□□□□ -0.79
MRPL55-223	ENST00000459783	GRHL1	Q9NZI5	618 aa		10.11	□□□□□ -0.79
MRPL55-223	ENST00000459783	CRLS1	Q9UJA2	301 aa		10.11	□□□□□ -0.79
MRPL55-223	ENST00000459783	SNX24	Q9Y343	169 aa		10.11	□□□□□ -0.79
MRPL55-223	ENST00000459783	SLC30A1	Q9Y6M5	507 aa		10.11	□□□□□ -0.79
MRPL55-223	ENST00000459783	COL27A1	Q8IZC6	1860 aa	Predicted RBP	10.1	□□□□□ -0.79
MRPL55-223	ENST00000459783	TRBV23OR9-2	A0A075B6M9	112 aa		10.1	□□□□□ -0.79
MRPL55-223	ENST00000459783	PRAMEF33	A0A0G2JMD5	474 aa		10.1	□□□□□ -0.79
MRPL55-223	ENST00000459783	CPED1	A4D0V7	1026 aa		10.1	□□□□□ -0.79
MRPL55-223	ENST00000459783	EME2	A4GXA9	379 aa	Predicted RBP	10.1	□□□□□ -0.79
MRPL55-223	ENST00000459783	EFCAB8	A8MWE9	144 aa		10.1	□□□□□ -0.79
MRPL55-223	ENST00000459783	GPR89A	B7ZAQ6	455 aa		10.1	□□□□□ -0.79
MRPL55-223	ENST00000459783	BHMG1	C9JSJ3	638 aa	Predicted RBP	10.1	□□□□□ -0.79
MRPL55-223	ENST00000459783	GOLGA8K	D6RF30	607 aa		10.1	□□□□□ -0.79
MRPL55-223	ENST00000459783	GOLGA8T	H3BQL2	631 aa		10.1	□□□□□ -0.79
MRPL55-223	ENST00000459783	KMO	O15229	486 aa		10.1	□□□□□ -0.79
MRPL55-223	ENST00000459783	HYAL3	O43820	417 aa	Predicted RBP	10.1	□□□□□ -0.79
MRPL55-223	ENST00000459783	RFPL3	O75679	317 aa		10.1	□□□□□ -0.79
MRPL55-223	ENST00000459783	POP7	O75817	140 aa	Known RBP	10.1	□□□□□ -0.79
MRPL55-223	ENST00000459783	VAPB	O95292	243 aa		10.1	□□□□□ -0.79
MRPL55-223	ENST00000459783	GPR89B	P0CG08	455 aa		10.1	□□□□□ -0.79
MRPL55-223	ENST00000459783	AKT1	P31749	480 aa		10.1	□□□□□ -0.79
MRPL55-223	ENST00000459783	CLCNKA	P51800	687 aa		10.1	□□□□□ -0.79
MRPL55-223	ENST00000459783	DAB2	P98082	770 aa		10.1	□□□□□ -0.79
MRPL55-223	ENST00000459783	DHX9	Q08211	1270 aa	Known RBP	10.1	□□□□□ -0.79
MRPL55-223	ENST00000459783	LRP8	Q14114	963 aa		10.1	□□□□□ -0.79
MRPL55-223	ENST00000459783	NR0B2	Q15466	257 aa		10.1	□□□□□ -0.79
MRPL55-223	ENST00000459783	WHAMMP3	Q1A5X7	153 aa		10.1	□□□□□ -0.79
MRPL55-223	ENST00000459783	ANKRD20A4	Q4UJ75	823 aa		10.1	□□□□□ -0.79
MRPL55-223	ENST00000459783	BCL7A	Q4VC05	210 aa		10.1	□□□□□ -0.79
MRPL55-223	ENST00000459783	C14orf28	Q4W4Y0	310 aa		10.1	□□□□□ -0.79

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