RNA–Protein interactions for RNA: ENST00000454555.2

LINC00343-203, long intergenic non-protein coding RNA 343, humanhuman

TSL 2 BASIC

Gene LINC00343, Length 1,765 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-203ENST00000454555 HERVK_113P63132 956 aa13.19□□□□□ -0.3
LINC00343-203ENST00000454555 PRKCQQ04759 706 aa13.19□□□□□ -0.3
LINC00343-203ENST00000454555 SMAD4Q13485 552 aaKnown RBP13.19□□□□□ -0.3
LINC00343-203ENST00000454555 ZNF678Q5SXM1 525 aa13.19□□□□□ -0.3
LINC00343-203ENST00000454555 HMBOX1Q6NT76 420 aa13.19□□□□□ -0.3
LINC00343-203ENST00000454555 EFL1Q7Z2Z2 1120 aaKnown RBP13.19□□□□□ -0.3
LINC00343-203ENST00000454555 ITFG1Q8TB96 612 aa13.19□□□□□ -0.3
LINC00343-203ENST00000454555 DQX1Q8TE96 717 aaKnown RBP13.19□□□□□ -0.3
LINC00343-203ENST00000454555 MOCOSQ96EN8 888 aa13.19□□□□□ -0.3
LINC00343-203ENST00000454555 CELF6Q96J87 481 aaKnown RBP13.19□□□□□ -0.3
LINC00343-203ENST00000454555 DNAJC1Q96KC8 554 aaKnown RBP13.19□□□□□ -0.3
LINC00343-203ENST00000454555 MRGPRX2Q96LB1 330 aa13.19□□□□□ -0.3
LINC00343-203ENST00000454555 CIB1Q99828 191 aa13.19□□□□□ -0.3
LINC00343-203ENST00000454555 ERVK-6Q9BXR3 956 aa13.19□□□□□ -0.3
LINC00343-203ENST00000454555 TRIM54Q9BYV2 358 aa13.19□□□□□ -0.3
LINC00343-203ENST00000454555 RNF38Q9H0F5 515 aa13.19□□□□□ -0.3
LINC00343-203ENST00000454555 SEMA6AQ9H2E6 1030 aa13.19□□□□□ -0.3
LINC00343-203ENST00000454555 MFSD1Q9H3U5 465 aa13.19□□□□□ -0.3
LINC00343-203ENST00000454555 SMOC2Q9H3U7 446 aa13.19□□□□□ -0.3
LINC00343-203ENST00000454555 ATP13A1Q9HD20 1204 aa13.19□□□□□ -0.3
LINC00343-203ENST00000454555 DUS2Q9NX74 493 aaKnown RBP13.19□□□□□ -0.3
LINC00343-203ENST00000454555 VWA7Q9Y334 891 aa13.19□□□□□ -0.3
LINC00343-203ENST00000454555 NOTCH4Q99466 2003 aa13.18□□□□□ -0.3
LINC00343-203ENST00000454555 DHRS12A0PJE2 317 aa13.18□□□□□ -0.3
LINC00343-203ENST00000454555 TBX18O95935 607 aa13.18□□□□□ -0.3
LINC00343-203ENST00000454555 F7P08709 466 aaPredicted RBP13.18□□□□□ -0.3
LINC00343-203ENST00000454555 IMPDH2P12268 514 aa13.18□□□□□ -0.3
LINC00343-203ENST00000454555 CEBPBP17676 345 aa13.18□□□□□ -0.3
LINC00343-203ENST00000454555 HDCP19113 662 aa13.18□□□□□ -0.3
LINC00343-203ENST00000454555 GPX3P22352 226 aa13.18□□□□□ -0.3
LINC00343-203ENST00000454555 PCSK6P29122 969 aa13.18□□□□□ -0.3
LINC00343-203ENST00000454555 CCR1P32246 355 aa13.18□□□□□ -0.3
LINC00343-203ENST00000454555 SERPINH1P50454 418 aaKnown RBP13.18□□□□□ -0.3
LINC00343-203ENST00000454555 RENBPP51606 427 aa13.18□□□□□ -0.3
LINC00343-203ENST00000454555 SLC7A9P82251 487 aa13.18□□□□□ -0.3
LINC00343-203ENST00000454555 TNK2Q07912 1038 aa13.18□□□□□ -0.3
LINC00343-203ENST00000454555 CBX2Q14781 532 aaPredicted RBP13.18□□□□□ -0.3
LINC00343-203ENST00000454555 LEXMQ3ZCV2 418 aa13.18□□□□□ -0.3
LINC00343-203ENST00000454555 C10orf120Q5SQS8 335 aa13.18□□□□□ -0.3
LINC00343-203ENST00000454555 GPR158Q5T848 1215 aa13.18□□□□□ -0.3
LINC00343-203ENST00000454555 HECTD2Q5U5R9 776 aa13.18□□□□□ -0.3
LINC00343-203ENST00000454555 MYO1HQ8N1T3 1032 aa13.18□□□□□ -0.3
LINC00343-203ENST00000454555 MIER2Q8N344 545 aa13.18□□□□□ -0.3
LINC00343-203ENST00000454555 BBS5Q8N3I7 341 aa13.18□□□□□ -0.3
LINC00343-203ENST00000454555 RHEBL1Q8TAI7 183 aa13.18□□□□□ -0.3
LINC00343-203ENST00000454555 CENPNQ96H22 339 aaPredicted RBP13.18□□□□□ -0.3
LINC00343-203ENST00000454555 TUBA1CQ9BQE3 449 aa13.18□□□□□ -0.3
LINC00343-203ENST00000454555 OSBPL6Q9BZF3 934 aa13.18□□□□□ -0.3
LINC00343-203ENST00000454555 NOL11Q9H8H0 719 aaKnown RBP13.18□□□□□ -0.3
LINC00343-203ENST00000454555 PFDN4Q9NQP4 134 aa13.18□□□□□ -0.3
LINC00343-203ENST00000454555 AGPAT4Q9NRZ5 378 aa13.18□□□□□ -0.3
LINC00343-203ENST00000454555 RBM22Q9NW64 420 aaKnown RBP eCLIP13.18□□□□□ -0.3
LINC00343-203ENST00000454555 IRAK4Q9NWZ3 460 aa13.18□□□□□ -0.3
LINC00343-203ENST00000454555 GDE1Q9NZC3 331 aa13.18□□□□□ -0.3
LINC00343-203ENST00000454555 TMEM9Q9P0T7 183 aa13.18□□□□□ -0.3
LINC00343-203ENST00000454555 DNMT3LQ9UJW3 386 aa13.18□□□□□ -0.3
LINC00343-203ENST00000454555 NUDT5Q9UKK9 219 aa13.18□□□□□ -0.3
LINC00343-203ENST00000454555 MYLKQ15746 1914 aa13.17□□□□□ -0.3
LINC00343-203ENST00000454555 TRAV19A0A0A6YYK7 116 aa13.17□□□□□ -0.3
LINC00343-203ENST00000454555 GRXCR2A6NFK2 248 aa13.17□□□□□ -0.3
LINC00343-203ENST00000454555 ANGPT2O15123 496 aa13.17□□□□□ -0.3
LINC00343-203ENST00000454555 MBTPS2O43462 519 aa13.17□□□□□ -0.3
LINC00343-203ENST00000454555 HLA-DQB2P05538 268 aa13.17□□□□□ -0.3
LINC00343-203ENST00000454555 GRIA3P42263 894 aa13.17□□□□□ -0.3
LINC00343-203ENST00000454555 ATXN3P54252 364 aaPredicted RBP13.17□□□□□ -0.3
LINC00343-203ENST00000454555 EFEMP1Q12805 493 aa13.17□□□□□ -0.3
LINC00343-203ENST00000454555 AASDHQ4L235 1098 aaPredicted RBP13.17□□□□□ -0.3
LINC00343-203ENST00000454555 TBCELQ5QJ74 424 aa13.17□□□□□ -0.3
LINC00343-203ENST00000454555 TTC33Q6PID6 262 aaPredicted RBP13.17□□□□□ -0.3
LINC00343-203ENST00000454555 KDELC1Q6UW63 502 aa13.17□□□□□ -0.3
LINC00343-203ENST00000454555 CILP2Q8IUL8 1156 aa13.17□□□□□ -0.3
LINC00343-203ENST00000454555 NPAS3Q8IXF0 933 aa13.17□□□□□ -0.3
LINC00343-203ENST00000454555 RBM12BQ8IXT5 1001 aaKnown RBP13.17□□□□□ -0.3
LINC00343-203ENST00000454555 CMTM8Q8IZV2 173 aa13.17□□□□□ -0.3
LINC00343-203ENST00000454555 ARL14EPQ8N8R7 260 aaPredicted RBP13.17□□□□□ -0.3
LINC00343-203ENST00000454555 RTL3Q8N8U3 475 aaKnown RBP13.17□□□□□ -0.3
LINC00343-203ENST00000454555 FAM47BQ8NA70 645 aa13.17□□□□□ -0.3
LINC00343-203ENST00000454555 MAFAQ8NHW3 353 aaPredicted RBP13.17□□□□□ -0.3
LINC00343-203ENST00000454555 FNDC8Q8TC99 324 aa13.17□□□□□ -0.3
LINC00343-203ENST00000454555 USP33Q8TEY7 942 aa13.17□□□□□ -0.3
LINC00343-203ENST00000454555 CANT1Q8WVQ1 401 aa13.17□□□□□ -0.3
LINC00343-203ENST00000454555 FGF13Q92913 245 aa13.17□□□□□ -0.3
LINC00343-203ENST00000454555 SERPINB11Q96P15 392 aa13.17□□□□□ -0.3
LINC00343-203ENST00000454555 SLC22A12Q96S37 553 aa13.17□□□□□ -0.3
LINC00343-203ENST00000454555 DOK1Q99704 481 aa13.17□□□□□ -0.3
LINC00343-203ENST00000454555 SLC29A1Q99808 456 aa13.17□□□□□ -0.3
LINC00343-203ENST00000454555 NACA2Q9H009 215 aa13.17□□□□□ -0.3
LINC00343-203ENST00000454555 MARCH2Q9P0N8 246 aa13.17□□□□□ -0.3
LINC00343-203ENST00000454555 SLC2A6Q9UGQ3 507 aa13.17□□□□□ -0.3
LINC00343-203ENST00000454555 SFMBT1Q9UHJ3 866 aa13.17□□□□□ -0.3
LINC00343-203ENST00000454555 FAF1Q9UNN5 650 aaPredicted RBP13.17□□□□□ -0.3
LINC00343-203ENST00000454555 ZFP37Q9Y6Q3 630 aaPredicted RBP13.17□□□□□ -0.3
LINC00343-203ENST00000454555 MYO16Q9Y6X6 1858 aa13.17□□□□□ -0.3
LINC00343-203ENST00000454555 NUP205Q92621 2012 aa13.17□□□□□ -0.3
LINC00343-203ENST00000454555 SZT2Q5T011 3432 aa13.17□□□□□ -0.3
LINC00343-203ENST00000454555 A0A0J9YYE9 177 aa13.17□□□□□ -0.3
LINC00343-203ENST00000454555 SH3PXD2BA1X283 911 aa13.17□□□□□ -0.3
LINC00343-203ENST00000454555 NPPAP01160 153 aa13.17□□□□□ -0.3
LINC00343-203ENST00000454555 PYGLP06737 847 aa13.17□□□□□ -0.3
LINC00343-203ENST00000454555 IDO1P14902 403 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms