RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 ANKRD22Q5VYY1 191 aa13.97□□□□□ -0.17
HDAC4-205ENST00000454542 ARMC3Q5W041 872 aa13.97□□□□□ -0.17
HDAC4-205ENST00000454542 LRRC8BQ6P9F7 803 aa13.97□□□□□ -0.17
HDAC4-205ENST00000454542 CRTC3Q6UUV7 619 aa13.97□□□□□ -0.17
HDAC4-205ENST00000454542 XKR5Q6UX68 686 aa13.97□□□□□ -0.17
HDAC4-205ENST00000454542 MICALCLQ6ZW33 695 aa13.97□□□□□ -0.17
HDAC4-205ENST00000454542 CHST15Q7LFX5 561 aaPredicted RBP13.97□□□□□ -0.17
HDAC4-205ENST00000454542 RASGEF1AQ8N9B8 481 aa13.97□□□□□ -0.17
HDAC4-205ENST00000454542 WDR48Q8TAF3 677 aa13.97□□□□□ -0.17
HDAC4-205ENST00000454542 PATE1Q8WXA2 126 aa13.97□□□□□ -0.17
HDAC4-205ENST00000454542 CPT1BQ92523 772 aa13.97□□□□□ -0.17
HDAC4-205ENST00000454542 CCDC97Q96F63 343 aaPredicted RBP13.97□□□□□ -0.17
HDAC4-205ENST00000454542 CCDC3Q9BQI4 270 aa13.97□□□□□ -0.17
HDAC4-205ENST00000454542 DDX47Q9H0S4 455 aaKnown RBP13.97□□□□□ -0.17
HDAC4-205ENST00000454542 DPEP2Q9H4A9 486 aa13.97□□□□□ -0.17
HDAC4-205ENST00000454542 MRM3Q9HC36 420 aaKnown RBP13.97□□□□□ -0.17
HDAC4-205ENST00000454542 GULP1Q9UBP9 304 aa13.97□□□□□ -0.17
HDAC4-205ENST00000454542 TBC1D29Q9UFV1 150 aa13.97□□□□□ -0.17
HDAC4-205ENST00000454542 SLC23A2Q9UGH3 650 aa13.97□□□□□ -0.17
HDAC4-205ENST00000454542 ZNHIT2Q9UHR6 403 aa13.97□□□□□ -0.17
HDAC4-205ENST00000454542 KCNK6Q9Y257 313 aa13.97□□□□□ -0.17
HDAC4-205ENST00000454542 RNF215Q9Y6U7 377 aa13.97□□□□□ -0.17
HDAC4-205ENST00000454542 CPED1A4D0V7 1026 aa13.96□□□□□ -0.17
HDAC4-205ENST00000454542 TCEA3O75764 348 aa13.96□□□□□ -0.17
HDAC4-205ENST00000454542 ECEL1O95672 775 aa13.96□□□□□ -0.17
HDAC4-205ENST00000454542 GAS8O95995 478 aa13.96□□□□□ -0.17
HDAC4-205ENST00000454542 F3P13726 295 aa13.96□□□□□ -0.17
HDAC4-205ENST00000454542 ZNF7P17097 686 aaPredicted RBP13.96□□□□□ -0.17
HDAC4-205ENST00000454542 ACRV1P26436 265 aa13.96□□□□□ -0.17
HDAC4-205ENST00000454542 MAGEA3P43357 314 aa13.96□□□□□ -0.17
HDAC4-205ENST00000454542 PRLHRP49683 370 aa13.96□□□□□ -0.17
HDAC4-205ENST00000454542 VPS41P49754 854 aa13.96□□□□□ -0.17
HDAC4-205ENST00000454542 ETF1P62495 437 aaKnown RBP13.96□□□□□ -0.17
HDAC4-205ENST00000454542 PTK6Q13882 451 aa13.96□□□□□ -0.17
HDAC4-205ENST00000454542 GTF2H3Q13889 308 aa13.96□□□□□ -0.17
HDAC4-205ENST00000454542 CCDC157Q569K6 752 aa13.96□□□□□ -0.17
HDAC4-205ENST00000454542 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.96□□□□□ -0.17
HDAC4-205ENST00000454542 NLRP9Q7RTR0 991 aa13.96□□□□□ -0.17
HDAC4-205ENST00000454542 SPRED1Q7Z699 444 aa13.96□□□□□ -0.17
HDAC4-205ENST00000454542 TRAPPC5Q8IUR0 188 aa13.96□□□□□ -0.17
HDAC4-205ENST00000454542 PIANPQ8IYJ0 282 aa13.96□□□□□ -0.17
HDAC4-205ENST00000454542 SFRP1Q8N474 314 aa13.96□□□□□ -0.17
HDAC4-205ENST00000454542 ARL14Q8N4G2 192 aa13.96□□□□□ -0.17
HDAC4-205ENST00000454542 NAT8LQ8N9F0 302 aa13.96□□□□□ -0.17
HDAC4-205ENST00000454542 GDAP1Q8TB36 358 aa13.96□□□□□ -0.17
HDAC4-205ENST00000454542 MAPK15Q8TD08 544 aa13.96□□□□□ -0.17
HDAC4-205ENST00000454542 SLC37A2Q8TED4 501 aa13.96□□□□□ -0.17
HDAC4-205ENST00000454542 SGSM3Q96HU1 749 aa13.96□□□□□ -0.17
HDAC4-205ENST00000454542 ZNF514Q96K75 400 aaPredicted RBP13.96□□□□□ -0.17
HDAC4-205ENST00000454542 LINC00615Q96LM1 132 aaPredicted RBP13.96□□□□□ -0.17
HDAC4-205ENST00000454542 ZNF778Q96MU6 729 aa13.96□□□□□ -0.17
HDAC4-205ENST00000454542 IL22Q9GZX6 179 aa13.96□□□□□ -0.17
HDAC4-205ENST00000454542 TREX1Q9NSU2 369 aa13.96□□□□□ -0.17
HDAC4-205ENST00000454542 RNF14Q9UBS8 474 aa13.96□□□□□ -0.17
HDAC4-205ENST00000454542 CRLS1Q9UJA2 301 aa13.96□□□□□ -0.17
HDAC4-205ENST00000454542 SLC30A1Q9Y6M5 507 aa13.96□□□□□ -0.17
HDAC4-205ENST00000454542 FRYQ5TBA9 3013 aa13.96□□□□□ -0.18
HDAC4-205ENST00000454542 A0A1W2PQM1 296 aa13.95□□□□□ -0.18
HDAC4-205ENST00000454542 CASC3O15234 703 aaKnown RBP13.95□□□□□ -0.18
HDAC4-205ENST00000454542 KCNJ13O60928 360 aa13.95□□□□□ -0.18
HDAC4-205ENST00000454542 MT-CO3P00414 261 aa13.95□□□□□ -0.18
HDAC4-205ENST00000454542 CAPNS1P04632 268 aa13.95□□□□□ -0.18
HDAC4-205ENST00000454542 PRSS56P0CW18 603 aa13.95□□□□□ -0.18
HDAC4-205ENST00000454542 MLNP12872 115 aa13.95□□□□□ -0.18
HDAC4-205ENST00000454542 PTGIRP43119 386 aa13.95□□□□□ -0.18
HDAC4-205ENST00000454542 CACNG1Q06432 222 aa13.95□□□□□ -0.18
HDAC4-205ENST00000454542 ITIH4Q14624 930 aa13.95□□□□□ -0.18
HDAC4-205ENST00000454542 INSCQ1MX18 579 aa13.95□□□□□ -0.18
HDAC4-205ENST00000454542 SKIDA1Q1XH10 827 aa13.95□□□□□ -0.18
HDAC4-205ENST00000454542 PLA2G4EQ3MJ16 856 aa13.95□□□□□ -0.18
HDAC4-205ENST00000454542 ZNF658BQ4V348 819 aaPredicted RBP13.95□□□□□ -0.18
HDAC4-205ENST00000454542 PCID2Q5JVF3 399 aa13.95□□□□□ -0.18
HDAC4-205ENST00000454542 AGAP9Q5VTM2 703 aa13.95□□□□□ -0.18
HDAC4-205ENST00000454542 AFTPHQ6ULP2 937 aa13.95□□□□□ -0.18
HDAC4-205ENST00000454542 WASH2PQ6VEQ5 465 aa13.95□□□□□ -0.18
HDAC4-205ENST00000454542 PACS1Q6VY07 963 aa13.95□□□□□ -0.18
HDAC4-205ENST00000454542 CAND1Q86VP6 1230 aaKnown RBP13.95□□□□□ -0.18
HDAC4-205ENST00000454542 MCUQ8NE86 351 aa13.95□□□□□ -0.18
HDAC4-205ENST00000454542 PPHLN1Q8NEY8 458 aaKnown RBP13.95□□□□□ -0.18
HDAC4-205ENST00000454542 HEXDCQ8WVB3 486 aa13.95□□□□□ -0.18
HDAC4-205ENST00000454542 CAPZA3Q96KX2 299 aa13.95□□□□□ -0.18
HDAC4-205ENST00000454542 RUNDC3BQ96NL0 473 aa13.95□□□□□ -0.18
HDAC4-205ENST00000454542 KIFC1Q9BW19 673 aa13.95□□□□□ -0.18
HDAC4-205ENST00000454542 SARS2Q9NP81 518 aaKnown RBP13.95□□□□□ -0.18
HDAC4-205ENST00000454542 WASH6PQ9NQA3 447 aa13.95□□□□□ -0.18
HDAC4-205ENST00000454542 KLC4Q9NSK0 619 aa13.95□□□□□ -0.18
HDAC4-205ENST00000454542 ZDHHC3Q9NYG2 299 aa13.95□□□□□ -0.18
HDAC4-205ENST00000454542 SLC2A6Q9UGQ3 507 aa13.95□□□□□ -0.18
HDAC4-205ENST00000454542 CLCA2Q9UQC9 943 aa13.95□□□□□ -0.18
HDAC4-205ENST00000454542 DNMT3AQ9Y6K1 912 aaPredicted RBP13.95□□□□□ -0.18
HDAC4-205ENST00000454542 KIR2DS5A0A0G2JLQ3 304 aa13.94□□□□□ -0.18
HDAC4-205ENST00000454542 A0A0G2JNG1 304 aa13.94□□□□□ -0.18
HDAC4-205ENST00000454542 CCDC162PA2VCL2 907 aa13.94□□□□□ -0.18
HDAC4-205ENST00000454542 FAM149AA5PLN7 773 aa13.94□□□□□ -0.18
HDAC4-205ENST00000454542 KLHL33A6NCF5 533 aa13.94□□□□□ -0.18
HDAC4-205ENST00000454542 OR51F1A6NGY5 319 aa13.94□□□□□ -0.18
HDAC4-205ENST00000454542 D6RAR5 112 aa13.94□□□□□ -0.18
HDAC4-205ENST00000454542 CCDC188H7C350 402 aa13.94□□□□□ -0.18
HDAC4-205ENST00000454542 KIR2DS3K7RE56 304 aa13.94□□□□□ -0.18
HDAC4-205ENST00000454542 SLC2A4P14672 509 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms