RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 COL5A1P20908 1838 aaPredicted RBP15.51■□□□□ 0.07
VCX3B-204ENST00000453306 LAMA5O15230 3695 aa15.51■□□□□ 0.07
VCX3B-204ENST00000453306 TMEM131Q92545 1883 aa15.5■□□□□ 0.07
VCX3B-204ENST00000453306 BPTFQ12830 3046 aa15.5■□□□□ 0.07
VCX3B-204ENST00000453306 LRRK1Q38SD2 2015 aa15.5■□□□□ 0.07
VCX3B-204ENST00000453306 TRBV5-4A0A0C4DH59 114 aa15.5■□□□□ 0.07
VCX3B-204ENST00000453306 MAGEB16A2A368 324 aa15.5■□□□□ 0.07
VCX3B-204ENST00000453306 MTX2O75431 263 aa15.5■□□□□ 0.07
VCX3B-204ENST00000453306 VAPBO95292 243 aa15.5■□□□□ 0.07
VCX3B-204ENST00000453306 PRAMEF1O95521 474 aa15.5■□□□□ 0.07
VCX3B-204ENST00000453306 C1QAP02745 245 aa15.5■□□□□ 0.07
VCX3B-204ENST00000453306 THEGLP0DJG4 465 aa15.5■□□□□ 0.07
VCX3B-204ENST00000453306 TSHRP16473 764 aa15.5■□□□□ 0.07
VCX3B-204ENST00000453306 B4GALNT1Q00973 533 aa15.5■□□□□ 0.07
VCX3B-204ENST00000453306 PDE1BQ01064 536 aa15.5■□□□□ 0.07
VCX3B-204ENST00000453306 EIF2B5Q13144 721 aaKnown RBP15.5■□□□□ 0.07
VCX3B-204ENST00000453306 NFATC2Q13469 925 aa15.5■□□□□ 0.07
VCX3B-204ENST00000453306 SOWAHCQ53LP3 525 aaPredicted RBP15.5■□□□□ 0.07
VCX3B-204ENST00000453306 STEAP4Q687X5 459 aa15.5■□□□□ 0.07
VCX3B-204ENST00000453306 LDB1Q86U70 411 aaPredicted RBP15.5■□□□□ 0.07
VCX3B-204ENST00000453306 IFT20Q8IY31 132 aa15.5■□□□□ 0.07
VCX3B-204ENST00000453306 PEX13Q92968 403 aa15.5■□□□□ 0.07
VCX3B-204ENST00000453306 GLYATL1Q969I3 302 aa15.5■□□□□ 0.07
VCX3B-204ENST00000453306 ZNF669Q96BR6 464 aaPredicted RBP15.5■□□□□ 0.07
VCX3B-204ENST00000453306 C9orf72Q96LT7 481 aa15.5■□□□□ 0.07
VCX3B-204ENST00000453306 C1QTNF7Q9BXJ2 289 aa15.5■□□□□ 0.07
VCX3B-204ENST00000453306 CDH19Q9H159 772 aa15.5■□□□□ 0.07
VCX3B-204ENST00000453306 RPS6KL1Q9Y6S9 549 aa15.5■□□□□ 0.07
VCX3B-204ENST00000453306 FAM169AQ9Y6X4 670 aa15.5■□□□□ 0.07
VCX3B-204ENST00000453306 MYLKQ15746 1914 aa15.5■□□□□ 0.07
VCX3B-204ENST00000453306 TRPM6Q9BX84 2022 aa15.5■□□□□ 0.07
VCX3B-204ENST00000453306 GCN1Q92616 2671 aaKnown RBP15.49■□□□□ 0.07
VCX3B-204ENST00000453306 A6NNZ2 444 aa15.49■□□□□ 0.07
VCX3B-204ENST00000453306 PIAS1O75925 651 aa15.49■□□□□ 0.07
VCX3B-204ENST00000453306 USP1O94782 785 aa15.49■□□□□ 0.07
VCX3B-204ENST00000453306 CEACAM5P06731 702 aa15.49■□□□□ 0.07
VCX3B-204ENST00000453306 HOXC4P09017 264 aaPredicted RBP15.49■□□□□ 0.07
VCX3B-204ENST00000453306 PGAM1P18669 254 aa15.49■□□□□ 0.07
VCX3B-204ENST00000453306 HADHAP40939 763 aa15.49■□□□□ 0.07
VCX3B-204ENST00000453306 MAGEA4P43358 317 aa15.49■□□□□ 0.07
VCX3B-204ENST00000453306 ABCG1P45844 678 aa15.49■□□□□ 0.07
VCX3B-204ENST00000453306 ACADVLP49748 655 aa15.49■□□□□ 0.07
VCX3B-204ENST00000453306 VSNL1P62760 191 aa15.49■□□□□ 0.07
VCX3B-204ENST00000453306 CUL1Q13616 776 aa15.49■□□□□ 0.07
VCX3B-204ENST00000453306 HLTFQ14527 1009 aaKnown RBP eCLIP15.49■□□□□ 0.07
VCX3B-204ENST00000453306 CRYMQ14894 314 aa15.49■□□□□ 0.07
VCX3B-204ENST00000453306 SHBQ15464 509 aa15.49■□□□□ 0.07
VCX3B-204ENST00000453306 ZNF542PQ5EBM4 170 aa15.49■□□□□ 0.07
VCX3B-204ENST00000453306 KIAA0930Q6ICG6 404 aaPredicted RBP15.49■□□□□ 0.07
VCX3B-204ENST00000453306 CENPUQ71F23 418 aa15.49■□□□□ 0.07
VCX3B-204ENST00000453306 NLRP9Q7RTR0 991 aa15.49■□□□□ 0.07
VCX3B-204ENST00000453306 PTAR1Q7Z6K3 402 aaPredicted RBP15.49■□□□□ 0.07
VCX3B-204ENST00000453306 CCDC25Q86WR0 208 aa15.49■□□□□ 0.07
VCX3B-204ENST00000453306 SPNS2Q8IVW8 549 aa15.49■□□□□ 0.07
VCX3B-204ENST00000453306 ZBED8Q8IZ13 594 aa15.49■□□□□ 0.07
VCX3B-204ENST00000453306 OR1E3Q8WZA6 343 aa15.49■□□□□ 0.07
VCX3B-204ENST00000453306 LRRC39Q96DD0 335 aa15.49■□□□□ 0.07
VCX3B-204ENST00000453306 CFAP36Q96G28 342 aa15.49■□□□□ 0.07
VCX3B-204ENST00000453306 KLHDC7BQ96G42 594 aa15.49■□□□□ 0.07
VCX3B-204ENST00000453306 ZSCAN5AQ9BUG6 496 aa15.49■□□□□ 0.07
VCX3B-204ENST00000453306 TXLNGYQ9BZA5 131 aa15.49■□□□□ 0.07
VCX3B-204ENST00000453306 TCEAL2Q9H3H9 227 aaPredicted RBP15.49■□□□□ 0.07
VCX3B-204ENST00000453306 ASB8Q9H765 288 aa15.49■□□□□ 0.07
VCX3B-204ENST00000453306 WDR26Q9H7D7 661 aa15.49■□□□□ 0.07
VCX3B-204ENST00000453306 FGF22Q9HCT0 170 aa15.49■□□□□ 0.07
VCX3B-204ENST00000453306 MRPL40Q9NQ50 206 aaKnown RBP15.49■□□□□ 0.07
VCX3B-204ENST00000453306 RAD18Q9NS91 495 aa15.49■□□□□ 0.07
VCX3B-204ENST00000453306 KCTD5Q9NXV2 234 aa15.49■□□□□ 0.07
VCX3B-204ENST00000453306 SLC17A6Q9P2U8 582 aa15.49■□□□□ 0.07
VCX3B-204ENST00000453306 ZC3H7BQ9UGR2 993 aaKnown RBP15.49■□□□□ 0.07
VCX3B-204ENST00000453306 PLXNA2O75051 1894 aa15.48■□□□□ 0.07
VCX3B-204ENST00000453306 SPTY2D1-AS1A0A0U1RR47 76 aa15.48■□□□□ 0.07
VCX3B-204ENST00000453306 SCAMP1O15126 338 aa15.48■□□□□ 0.07
VCX3B-204ENST00000453306 EIF3HO15372 352 aaKnown RBP eCLIP15.48■□□□□ 0.07
VCX3B-204ENST00000453306 SGTAO43765 313 aa15.48■□□□□ 0.07
VCX3B-204ENST00000453306 SSTR1P30872 391 aa15.48■□□□□ 0.07
VCX3B-204ENST00000453306 YPEL5P62699 121 aa15.48■□□□□ 0.07
VCX3B-204ENST00000453306 DNAJC3Q13217 504 aa15.48■□□□□ 0.07
VCX3B-204ENST00000453306 LAMB3Q13751 1172 aa15.48■□□□□ 0.07
VCX3B-204ENST00000453306 NFATC4Q14934 902 aa15.48■□□□□ 0.07
VCX3B-204ENST00000453306 DBN1Q16643 649 aa15.48■□□□□ 0.07
VCX3B-204ENST00000453306 ZNF789Q5FWF6 425 aa15.48■□□□□ 0.07
VCX3B-204ENST00000453306 GPRC6AQ5T6X5 926 aa15.48■□□□□ 0.07
VCX3B-204ENST00000453306 ARMC3Q5W041 872 aa15.48■□□□□ 0.07
VCX3B-204ENST00000453306 ZDHHC20Q5W0Z9 365 aa15.48■□□□□ 0.07
VCX3B-204ENST00000453306 LRRC69Q6ZNQ3 347 aa15.48■□□□□ 0.07
VCX3B-204ENST00000453306 ADGRG6Q86SQ4 1221 aa15.48■□□□□ 0.07
VCX3B-204ENST00000453306 SERPINA9Q86WD7 417 aa15.48■□□□□ 0.07
VCX3B-204ENST00000453306 OR6P1Q8NGX9 317 aa15.48■□□□□ 0.07
VCX3B-204ENST00000453306 OR4L1Q8NH43 312 aa15.48■□□□□ 0.07
VCX3B-204ENST00000453306 TSACCQ96A04 125 aaPredicted RBP15.48■□□□□ 0.07
VCX3B-204ENST00000453306 SGSM3Q96HU1 749 aa15.48■□□□□ 0.07
VCX3B-204ENST00000453306 HIC2Q96JB3 615 aa15.48■□□□□ 0.07
VCX3B-204ENST00000453306 DCBLD2Q96PD2 775 aa15.48■□□□□ 0.07
VCX3B-204ENST00000453306 VPS35Q96QK1 796 aa15.48■□□□□ 0.07
VCX3B-204ENST00000453306 BOCQ9BWV1 1114 aa15.48■□□□□ 0.07
VCX3B-204ENST00000453306 NRSN2Q9GZP1 204 aa15.48■□□□□ 0.07
VCX3B-204ENST00000453306 LRRC4CQ9HCJ2 640 aa15.48■□□□□ 0.07
VCX3B-204ENST00000453306 SMYD2Q9NRG4 433 aa15.48■□□□□ 0.07
VCX3B-204ENST00000453306 SMOXQ9NWM0 555 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms