RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 TGIF1Q15583 401 aa9.55□□□□□ -0.88
USP54-207ENST00000451492 CHRNA6Q15825 494 aa9.55□□□□□ -0.88
USP54-207ENST00000451492 SEL1L2Q5TEA6 688 aa9.55□□□□□ -0.88
USP54-207ENST00000451492 PDPK2PQ6A1A2 396 aa9.55□□□□□ -0.88
USP54-207ENST00000451492 ZNF574Q6ZN55 896 aaPredicted RBP9.55□□□□□ -0.88
USP54-207ENST00000451492 ARHGEF18Q6ZSZ5 1173 aa9.55□□□□□ -0.88
USP54-207ENST00000451492 SLC9B2Q86UD5 537 aa9.55□□□□□ -0.88
USP54-207ENST00000451492 FAM129CQ86XR2 697 aa9.55□□□□□ -0.88
USP54-207ENST00000451492 TRIM48Q8IWZ4 208 aa9.55□□□□□ -0.88
USP54-207ENST00000451492 OR4K2Q8NGD2 314 aa9.55□□□□□ -0.88
USP54-207ENST00000451492 OR13C4Q8NGS5 318 aa9.55□□□□□ -0.88
USP54-207ENST00000451492 OR10G6Q8NH81 332 aa9.55□□□□□ -0.88
USP54-207ENST00000451492 JPH3Q8WXH2 748 aaPredicted RBP9.55□□□□□ -0.88
USP54-207ENST00000451492 ATG4AQ8WYN0 398 aa9.55□□□□□ -0.88
USP54-207ENST00000451492 NCSTNQ92542 709 aa9.55□□□□□ -0.88
USP54-207ENST00000451492 USP7Q93009 1102 aa9.55□□□□□ -0.88
USP54-207ENST00000451492 PMEPA1Q969W9 287 aa9.55□□□□□ -0.88
USP54-207ENST00000451492 CMKLR1Q99788 373 aa9.55□□□□□ -0.88
USP54-207ENST00000451492 TBL1YQ9BQ87 522 aa9.55□□□□□ -0.88
USP54-207ENST00000451492 TBC1D10AQ9BXI6 508 aa9.55□□□□□ -0.88
USP54-207ENST00000451492 PRORYQ9H606 182 aa9.55□□□□□ -0.88
USP54-207ENST00000451492 PIH1D1Q9NWS0 290 aaKnown RBP9.55□□□□□ -0.88
USP54-207ENST00000451492 HACD3Q9P035 362 aa9.55□□□□□ -0.88
USP54-207ENST00000451492 FOXJ2Q9P0K8 574 aa9.55□□□□□ -0.88
USP54-207ENST00000451492 AKAP7Q9P0M2 348 aaPredicted RBP9.55□□□□□ -0.88
USP54-207ENST00000451492 IL17CQ9P0M4 197 aa9.55□□□□□ -0.88
USP54-207ENST00000451492 SCHIP1Q9P0W5 487 aaPredicted RBP9.55□□□□□ -0.88
USP54-207ENST00000451492 NFKBIL1Q9UBC1 381 aaPredicted RBP9.55□□□□□ -0.88
USP54-207ENST00000451492 SLC23A2Q9UGH3 650 aa9.55□□□□□ -0.88
USP54-207ENST00000451492 FKBPLQ9UIM3 349 aa9.55□□□□□ -0.88
USP54-207ENST00000451492 TMPRSS11EQ9UL52 423 aa9.55□□□□□ -0.88
USP54-207ENST00000451492 KCTD3Q9Y597 815 aa9.55□□□□□ -0.88
USP54-207ENST00000451492 FAM208BQ5VWN6 2430 aa9.54□□□□□ -0.88
USP54-207ENST00000451492 SMG1Q96Q15 3661 aaKnown RBP9.54□□□□□ -0.88
USP54-207ENST00000451492 CCDC78A2IDD5 438 aa9.54□□□□□ -0.88
USP54-207ENST00000451492 OR52A4PA6NMU1 304 aa9.54□□□□□ -0.88
USP54-207ENST00000451492 MIF4GDA9UHW6 222 aaKnown RBP9.54□□□□□ -0.88
USP54-207ENST00000451492 PRAMEF1O95521 474 aa9.54□□□□□ -0.88
USP54-207ENST00000451492 PRB1P04280 392 aa9.54□□□□□ -0.88
USP54-207ENST00000451492 SLC2A4P14672 509 aa9.54□□□□□ -0.88
USP54-207ENST00000451492 ZNF7P17097 686 aaPredicted RBP9.54□□□□□ -0.88
USP54-207ENST00000451492 GPR3P46089 330 aa9.54□□□□□ -0.88
USP54-207ENST00000451492 FASLGP48023 281 aa9.54□□□□□ -0.88
USP54-207ENST00000451492 LIMK2P53671 638 aa9.54□□□□□ -0.88
USP54-207ENST00000451492 GDF10P55107 478 aa9.54□□□□□ -0.88
USP54-207ENST00000451492 CFHR1Q03591 330 aa9.54□□□□□ -0.88
USP54-207ENST00000451492 ZFP36L1Q07352 338 aaKnown RBP9.54□□□□□ -0.88
USP54-207ENST00000451492 TMEM115Q12893 351 aaPredicted RBP9.54□□□□□ -0.88
USP54-207ENST00000451492 CLN3Q13286 438 aa9.54□□□□□ -0.88
USP54-207ENST00000451492 ITGA9Q13797 1035 aa9.54□□□□□ -0.88
USP54-207ENST00000451492 SEPT6Q14141 434 aa9.54□□□□□ -0.88
USP54-207ENST00000451492 NR1D2Q14995 579 aa9.54□□□□□ -0.88
USP54-207ENST00000451492 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.54□□□□□ -0.88
USP54-207ENST00000451492 IYDQ6PHW0 289 aa9.54□□□□□ -0.88
USP54-207ENST00000451492 IGF2-ASQ6U949 168 aa9.54□□□□□ -0.88
USP54-207ENST00000451492 GPR155Q7Z3F1 870 aa9.54□□□□□ -0.88
USP54-207ENST00000451492 CLEC14AQ86T13 490 aa9.54□□□□□ -0.88
USP54-207ENST00000451492 VASH2Q86V25 355 aa9.54□□□□□ -0.88
USP54-207ENST00000451492 ZFAND4Q86XD8 727 aa9.54□□□□□ -0.88
USP54-207ENST00000451492 ZNF547Q8IVP9 402 aa9.54□□□□□ -0.88
USP54-207ENST00000451492 FAM71DQ8N9W8 422 aa9.54□□□□□ -0.88
USP54-207ENST00000451492 SPATA13Q96N96 652 aa9.54□□□□□ -0.88
USP54-207ENST00000451492 VPS35Q96QK1 796 aa9.54□□□□□ -0.88
USP54-207ENST00000451492 SRPK1Q96SB4 655 aaKnown RBP9.54□□□□□ -0.88
USP54-207ENST00000451492 TMEM121Q9BTD3 319 aa9.54□□□□□ -0.88
USP54-207ENST00000451492 TRABDQ9H4I3 376 aa9.54□□□□□ -0.88
USP54-207ENST00000451492 FAM96AQ9H5X1 160 aa9.54□□□□□ -0.88
USP54-207ENST00000451492 IL26Q9NPH9 171 aa9.54□□□□□ -0.88
USP54-207ENST00000451492 LZTFL1Q9NQ48 299 aa9.54□□□□□ -0.88
USP54-207ENST00000451492 PSMD13Q9UNM6 376 aa9.54□□□□□ -0.88
USP54-207ENST00000451492 EFR3BQ9Y2G0 817 aa9.54□□□□□ -0.88
USP54-207ENST00000451492 AAR2Q9Y312 384 aaKnown RBP9.54□□□□□ -0.88
USP54-207ENST00000451492 ADGRG1Q9Y653 693 aa9.54□□□□□ -0.88
USP54-207ENST00000451492 MGAQ8IWI9 3026 aa9.53□□□□□ -0.88
USP54-207ENST00000451492 A6NCN8 305 aa9.53□□□□□ -0.88
USP54-207ENST00000451492 C2orf81A6NN90 581 aa9.53□□□□□ -0.88
USP54-207ENST00000451492 EFCAB7A8K855 629 aa9.53□□□□□ -0.88
USP54-207ENST00000451492 C9orf172C9J069 976 aa9.53□□□□□ -0.88
USP54-207ENST00000451492 GAPDHSO14556 408 aaPredicted RBP9.53□□□□□ -0.88
USP54-207ENST00000451492 CHUKO15111 745 aa9.53□□□□□ -0.88
USP54-207ENST00000451492 KRT86O43790 486 aa9.53□□□□□ -0.88
USP54-207ENST00000451492 VEGFDO43915 354 aa9.53□□□□□ -0.88
USP54-207ENST00000451492 VIPP01282 170 aa9.53□□□□□ -0.88
USP54-207ENST00000451492 THRAP10827 490 aa9.53□□□□□ -0.88
USP54-207ENST00000451492 TYRP1P17643 537 aa9.53□□□□□ -0.88
USP54-207ENST00000451492 MSH3P20585 1137 aa9.53□□□□□ -0.88
USP54-207ENST00000451492 LPOP22079 712 aaPredicted RBP9.53□□□□□ -0.88
USP54-207ENST00000451492 CSTF2P33240 577 aaKnown RBP eCLIP9.53□□□□□ -0.88
USP54-207ENST00000451492 CTSCP53634 463 aa9.53□□□□□ -0.88
USP54-207ENST00000451492 GFERP55789 205 aa9.53□□□□□ -0.88
USP54-207ENST00000451492 GPLD1P80108 840 aa9.53□□□□□ -0.88
USP54-207ENST00000451492 SOWAHCQ53LP3 525 aaPredicted RBP9.53□□□□□ -0.88
USP54-207ENST00000451492 FNBP1LQ5T0N5 605 aa9.53□□□□□ -0.88
USP54-207ENST00000451492 GPRC6AQ5T6X5 926 aa9.53□□□□□ -0.88
USP54-207ENST00000451492 KIAA1614Q5VZ46 1190 aa9.53□□□□□ -0.88
USP54-207ENST00000451492 CCDC81Q6ZN84 652 aa9.53□□□□□ -0.88
USP54-207ENST00000451492 BEND7Q8N7W2 519 aaPredicted RBP9.53□□□□□ -0.88
USP54-207ENST00000451492 RASGEF1AQ8N9B8 481 aa9.53□□□□□ -0.88
USP54-207ENST00000451492 OR4D9Q8NGE8 314 aa9.53□□□□□ -0.88
USP54-207ENST00000451492 ART4Q93070 314 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms