RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 NAP1L6A6NFF2 107 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 MYMKA6NI61 221 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 LRRC72A6NJI9 287 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 CLIC2O15247 247 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 PRAMEF2O60811 474 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 KDM4BO94953 1096 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 INMTO95050 263 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 MLYCDO95822 493 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 MBP02144 154 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 C1QBP02746 253 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 RPN2P04844 631 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 NR2F6P10588 404 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 ACADMP11310 421 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 LCP1P13796 627 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 POU2F1P14859 743 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 GPD1P21695 349 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 CHMP24386 653 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 GKP32189 559 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 FOXN2P32314 431 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 SPAM1P38567 509 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 RPL3P39023 403 aaKnown RBP2.19□□□□□ -2.06
USP53-202ENST00000450251 MTHFRP42898 656 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 BRCC3P46736 316 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 B2MP61769 119 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 ERVK-8P63133 956 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 RGS1Q08116 209 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 SLC13A2Q13183 592 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 GTF2H3Q13889 308 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 DGCR6Q14129 220 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 GRB14Q14449 540 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 VEPH1Q14D04 833 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 SF3A2Q15428 464 aaKnown RBP2.19□□□□□ -2.06
USP53-202ENST00000450251 MGAT5BQ3V5L5 792 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 TMEM119Q4V9L6 283 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 FNBP1LQ5T0N5 605 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 OTUD3Q5T2D3 398 aaPredicted RBP2.19□□□□□ -2.06
USP53-202ENST00000450251 FAM160B1Q5W0V3 765 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 ADNP2Q6IQ32 1131 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 ANKRD54Q6NXT1 300 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 C1orf94Q6P1W5 598 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 FBXO42Q6P3S6 717 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 FAM111BQ6SJ93 734 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 ZDHHC24Q6UX98 284 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 HSDL2Q6YN16 418 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 RFPL4BQ6ZWI9 263 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 CARM1Q86X55 608 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 ABI1Q8IZP0 508 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 LGI2Q8N0V4 545 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 GJD3Q8N144 294 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 CLIP4Q8N3C7 705 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 CLRN3Q8NCR9 226 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 CCNYQ8ND76 341 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 CHAC2Q8WUX2 184 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 HERVK_113Q902F9 699 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 IP6K1Q92551 441 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 LPGAT1Q92604 370 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 SNAPC3Q92966 411 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 SLC38A4Q969I6 547 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 IFT43Q96FT9 208 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 DUS3LQ96G46 650 aaKnown RBP2.19□□□□□ -2.06
USP53-202ENST00000450251 TMEM41AQ96HV5 264 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 LRFN5Q96NI6 719 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 SLC4A9Q96Q91 983 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 SLC38A2Q96QD8 506 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 TEFMQ96QE5 360 aaKnown RBP2.19□□□□□ -2.06
USP53-202ENST00000450251 STRBPQ96SI9 672 aaKnown RBP2.19□□□□□ -2.06
USP53-202ENST00000450251 TRAF4Q9BUZ4 470 aaPredicted RBP2.19□□□□□ -2.06
USP53-202ENST00000450251 REPIN1Q9BWE0 567 aaKnown RBP2.19□□□□□ -2.06
USP53-202ENST00000450251 PAPOLGQ9BWT3 736 aaKnown RBP2.19□□□□□ -2.06
USP53-202ENST00000450251 ZDHHC5Q9C0B5 715 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 PDGFDQ9GZP0 370 aaPredicted RBP2.19□□□□□ -2.06
USP53-202ENST00000450251 HOXD1Q9GZZ0 328 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 DNTTIP1Q9H147 329 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 HSD3B7Q9H2F3 369 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 DBNDD1Q9H9R9 158 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 RAD18Q9NS91 495 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 IMP3Q9NV31 184 aaKnown RBP2.19□□□□□ -2.06
USP53-202ENST00000450251 TMEM161AQ9NX61 479 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 DPP3Q9NY33 737 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 EXTL2Q9UBQ6 330 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 CD300AQ9UGN4 299 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 RIMKLBQ9ULI2 386 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 POFUT2Q9Y2G5 429 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 PCDHB3Q9Y5E6 796 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 CSNK1G3Q9Y6M4 447 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 CRYBG1Q9Y4K1 1723 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 PLEKHG3A1L390 1219 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 BCLAF3A2AJT9 711 aaKnown RBP2.19□□□□□ -2.06
USP53-202ENST00000450251 RCCD1A6NED2 376 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 GRXCR2A6NFK2 248 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 F8W036 122 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 TPP1O14773 563 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 PHYHO14832 338 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 TPST1O60507 370 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 PLIN3O60664 434 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 ENTPD6O75354 484 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 TIPRLO75663 272 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 OR6B1O95007 311 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 PIGNO95427 931 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 ADAMTS2O95450 1211 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms