RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 PADI4Q9UM07 663 aa13.84□□□□□ -0.19
GTF3C3-206ENST00000448539 KCNK6Q9Y257 313 aa13.84□□□□□ -0.19
GTF3C3-206ENST00000448539 COL5A1P20908 1838 aaPredicted RBP13.83□□□□□ -0.2
GTF3C3-206ENST00000448539 CCDC162PA2VCL2 907 aa13.83□□□□□ -0.2
GTF3C3-206ENST00000448539 SDR42E2A6NKP2 422 aa13.83□□□□□ -0.2
GTF3C3-206ENST00000448539 OR2AG2A6NM03 316 aa13.83□□□□□ -0.2
GTF3C3-206ENST00000448539 NDC80O14777 642 aa13.83□□□□□ -0.2
GTF3C3-206ENST00000448539 AVILO75366 819 aa13.83□□□□□ -0.2
GTF3C3-206ENST00000448539 GOT2P00505 430 aaKnown RBP13.83□□□□□ -0.2
GTF3C3-206ENST00000448539 ZNF7P17097 686 aaPredicted RBP13.83□□□□□ -0.2
GTF3C3-206ENST00000448539 ACRV1P26436 265 aa13.83□□□□□ -0.2
GTF3C3-206ENST00000448539 PPARGP37231 505 aaPredicted RBP13.83□□□□□ -0.2
GTF3C3-206ENST00000448539 ARSDP51689 593 aa13.83□□□□□ -0.2
GTF3C3-206ENST00000448539 FOXC1Q12948 553 aa13.83□□□□□ -0.2
GTF3C3-206ENST00000448539 TUBB2AQ13885 445 aa13.83□□□□□ -0.2
GTF3C3-206ENST00000448539 FASTKD1Q53R41 847 aaKnown RBP13.83□□□□□ -0.2
GTF3C3-206ENST00000448539 ARMC3Q5W041 872 aa13.83□□□□□ -0.2
GTF3C3-206ENST00000448539 TMEM220Q6QAJ8 160 aa13.83□□□□□ -0.2
GTF3C3-206ENST00000448539 DET1Q7L5Y6 550 aa13.83□□□□□ -0.2
GTF3C3-206ENST00000448539 SLCO6A1Q86UG4 719 aa13.83□□□□□ -0.2
GTF3C3-206ENST00000448539 CAND1Q86VP6 1230 aaKnown RBP13.83□□□□□ -0.2
GTF3C3-206ENST00000448539 HOOK3Q86VS8 718 aa13.83□□□□□ -0.2
GTF3C3-206ENST00000448539 SERPINA9Q86WD7 417 aa13.83□□□□□ -0.2
GTF3C3-206ENST00000448539 RASGEF1AQ8N9B8 481 aa13.83□□□□□ -0.2
GTF3C3-206ENST00000448539 KYQ8NBH2 561 aa13.83□□□□□ -0.2
GTF3C3-206ENST00000448539 OR6C4Q8NGE1 309 aa13.83□□□□□ -0.2
GTF3C3-206ENST00000448539 KIF18AQ8NI77 898 aa13.83□□□□□ -0.2
GTF3C3-206ENST00000448539 IFI44Q8TCB0 444 aa13.83□□□□□ -0.2
GTF3C3-206ENST00000448539 ZNF778Q96MU6 729 aa13.83□□□□□ -0.2
GTF3C3-206ENST00000448539 SERPINB12Q96P63 405 aa13.83□□□□□ -0.2
GTF3C3-206ENST00000448539 TIMM29Q9BSF4 260 aa13.83□□□□□ -0.2
GTF3C3-206ENST00000448539 TRIM51Q9BSJ1 452 aa13.83□□□□□ -0.2
GTF3C3-206ENST00000448539 TUBB2BQ9BVA1 445 aa13.83□□□□□ -0.2
GTF3C3-206ENST00000448539 KIFC1Q9BW19 673 aa13.83□□□□□ -0.2
GTF3C3-206ENST00000448539 TRIM31Q9BZY9 425 aa13.83□□□□□ -0.2
GTF3C3-206ENST00000448539 ABCG4Q9H172 646 aa13.83□□□□□ -0.2
GTF3C3-206ENST00000448539 MRM3Q9HC36 420 aaKnown RBP13.83□□□□□ -0.2
GTF3C3-206ENST00000448539 KLC4Q9NSK0 619 aa13.83□□□□□ -0.2
GTF3C3-206ENST00000448539 SPATS2LQ9NUQ6 558 aaKnown RBP13.83□□□□□ -0.2
GTF3C3-206ENST00000448539 TOR4AQ9NXH8 423 aa13.83□□□□□ -0.2
GTF3C3-206ENST00000448539 ZDHHC3Q9NYG2 299 aa13.83□□□□□ -0.2
GTF3C3-206ENST00000448539 ANAPC5Q9UJX4 755 aa13.83□□□□□ -0.2
GTF3C3-206ENST00000448539 SOX13Q9UN79 622 aa13.83□□□□□ -0.2
GTF3C3-206ENST00000448539 DNAJC16Q9Y2G8 782 aa13.83□□□□□ -0.2
GTF3C3-206ENST00000448539 PCYT1BQ9Y5K3 369 aaPredicted RBP13.83□□□□□ -0.2
GTF3C3-206ENST00000448539 PCNX2A6NKB5 2137 aa13.82□□□□□ -0.2
GTF3C3-206ENST00000448539 SCN8AQ9UQD0 1980 aa13.82□□□□□ -0.2
GTF3C3-206ENST00000448539 KMT2BQ9UMN6 2715 aaPredicted RBP13.82□□□□□ -0.2
GTF3C3-206ENST00000448539 MAGEB16A2A368 324 aa13.82□□□□□ -0.2
GTF3C3-206ENST00000448539 EME2A4GXA9 379 aaPredicted RBP13.82□□□□□ -0.2
GTF3C3-206ENST00000448539 FAM187AA6NFU0 413 aa13.82□□□□□ -0.2
GTF3C3-206ENST00000448539 OR51F1A6NGY5 319 aa13.82□□□□□ -0.2
GTF3C3-206ENST00000448539 AGAP14A8MT82 685 aa13.82□□□□□ -0.2
GTF3C3-206ENST00000448539 EFCAB8A8MWE9 144 aa13.82□□□□□ -0.2
GTF3C3-206ENST00000448539 SMAPO00193 183 aa13.82□□□□□ -0.2
GTF3C3-206ENST00000448539 SNX2O60749 519 aa13.82□□□□□ -0.2
GTF3C3-206ENST00000448539 KCNJ13O60928 360 aa13.82□□□□□ -0.2
GTF3C3-206ENST00000448539 GP1BAP07359 652 aa13.82□□□□□ -0.2
GTF3C3-206ENST00000448539 SLC2A4P14672 509 aa13.82□□□□□ -0.2
GTF3C3-206ENST00000448539 PAMP19021 973 aa13.82□□□□□ -0.2
GTF3C3-206ENST00000448539 CA5AP35218 305 aa13.82□□□□□ -0.2
GTF3C3-206ENST00000448539 E2F1Q01094 437 aa13.82□□□□□ -0.2
GTF3C3-206ENST00000448539 ACVR1Q04771 509 aa13.82□□□□□ -0.2
GTF3C3-206ENST00000448539 MORF4L2Q15014 288 aa13.82□□□□□ -0.2
GTF3C3-206ENST00000448539 WHAMMP3Q1A5X7 153 aa13.82□□□□□ -0.2
GTF3C3-206ENST00000448539 C14orf28Q4W4Y0 310 aa13.82□□□□□ -0.2
GTF3C3-206ENST00000448539 DNAJC21Q5F1R6 531 aaKnown RBP13.82□□□□□ -0.2
GTF3C3-206ENST00000448539 AARS2Q5JTZ9 985 aaKnown RBP13.82□□□□□ -0.2
GTF3C3-206ENST00000448539 FNBP1LQ5T0N5 605 aa13.82□□□□□ -0.2
GTF3C3-206ENST00000448539 LYPLAL1Q5VWZ2 237 aa13.82□□□□□ -0.2
GTF3C3-206ENST00000448539 GUSBP11Q6P575 273 aa13.82□□□□□ -0.2
GTF3C3-206ENST00000448539 OGFOD3Q6PK18 319 aa13.82□□□□□ -0.2
GTF3C3-206ENST00000448539 EFL1Q7Z2Z2 1120 aaKnown RBP13.82□□□□□ -0.2
GTF3C3-206ENST00000448539 OTUD6BQ8N6M0 293 aa13.82□□□□□ -0.2
GTF3C3-206ENST00000448539 GPR156Q8NFN8 814 aa13.82□□□□□ -0.2
GTF3C3-206ENST00000448539 OR4L1Q8NH43 312 aa13.82□□□□□ -0.2
GTF3C3-206ENST00000448539 ADAMTS14Q8WXS8 1223 aa13.82□□□□□ -0.2
GTF3C3-206ENST00000448539 SNF8Q96H20 258 aa13.82□□□□□ -0.2
GTF3C3-206ENST00000448539 MAD1L1Q9Y6D9 718 aa13.82□□□□□ -0.2
GTF3C3-206ENST00000448539 DNMT3AQ9Y6K1 912 aaPredicted RBP13.82□□□□□ -0.2
GTF3C3-206ENST00000448539 ZFHX4Q86UP3 3567 aa13.82□□□□□ -0.2
GTF3C3-206ENST00000448539 LRP4O75096 1905 aa13.82□□□□□ -0.2
GTF3C3-206ENST00000448539 TRBV5-4A0A0C4DH59 114 aa13.81□□□□□ -0.2
GTF3C3-206ENST00000448539 LY6G6EA0A0G2JKS1 128 aa13.81□□□□□ -0.2
GTF3C3-206ENST00000448539 ZW10O43264 779 aa13.81□□□□□ -0.2
GTF3C3-206ENST00000448539 POP7O75817 140 aaKnown RBP13.81□□□□□ -0.2
GTF3C3-206ENST00000448539 KRT37O76014 449 aa13.81□□□□□ -0.2
GTF3C3-206ENST00000448539 ATP1B2P14415 290 aaPredicted RBP13.81□□□□□ -0.2
GTF3C3-206ENST00000448539 NMBRP28336 390 aa13.81□□□□□ -0.2
GTF3C3-206ENST00000448539 PBLDP30039 288 aaPredicted RBP13.81□□□□□ -0.2
GTF3C3-206ENST00000448539 FOXN2P32314 431 aa13.81□□□□□ -0.2
GTF3C3-206ENST00000448539 CDKN1CP49918 316 aaPredicted RBP13.81□□□□□ -0.2
GTF3C3-206ENST00000448539 CLCNKAP51800 687 aa13.81□□□□□ -0.2
GTF3C3-206ENST00000448539 CTSCP53634 463 aa13.81□□□□□ -0.2
GTF3C3-206ENST00000448539 SHC2P98077 582 aa13.81□□□□□ -0.2
GTF3C3-206ENST00000448539 ITIH4Q14624 930 aa13.81□□□□□ -0.2
GTF3C3-206ENST00000448539 DHRS13Q6UX07 377 aa13.81□□□□□ -0.2
GTF3C3-206ENST00000448539 CERS6Q6ZMG9 384 aa13.81□□□□□ -0.2
GTF3C3-206ENST00000448539 AMZ2Q86W34 360 aa13.81□□□□□ -0.2
GTF3C3-206ENST00000448539 ZNF547Q8IVP9 402 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms