RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 VPS26AO75436 327 aa24.59■■□□□ 1.53
RFFL-206ENST00000447669 PCCBP05166 539 aa24.59■■□□□ 1.53
RFFL-206ENST00000447669 GSTA1P08263 222 aa24.59■■□□□ 1.53
RFFL-206ENST00000447669 TBC1D3HP0C7X1 549 aa24.59■■□□□ 1.53
RFFL-206ENST00000447669 TAC1P20366 129 aa24.59■■□□□ 1.53
RFFL-206ENST00000447669 RPS3P23396 243 aaKnown RBP eCLIP24.59■■□□□ 1.53
RFFL-206ENST00000447669 ACSL1P33121 698 aa24.59■■□□□ 1.53
RFFL-206ENST00000447669 NSG1P42857 185 aa24.59■■□□□ 1.53
RFFL-206ENST00000447669 GPR1P46091 355 aa24.59■■□□□ 1.53
RFFL-206ENST00000447669 KCNC1P48547 511 aa24.59■■□□□ 1.53
RFFL-206ENST00000447669 CREB5Q02930 508 aa24.59■■□□□ 1.53
RFFL-206ENST00000447669 TBC1D3GQ6DHY5 549 aa24.59■■□□□ 1.53
RFFL-206ENST00000447669 TBC1D3CQ6IPX1 549 aa24.59■■□□□ 1.53
RFFL-206ENST00000447669 LRRC8EQ6NSJ5 796 aa24.59■■□□□ 1.53
RFFL-206ENST00000447669 ZCCHC23Q6ZST2 131 aa24.59■■□□□ 1.53
RFFL-206ENST00000447669 CPNE9Q8IYJ1 553 aa24.59■■□□□ 1.53
RFFL-206ENST00000447669 TBC1D3Q8IZP1 549 aaPredicted RBP24.59■■□□□ 1.53
RFFL-206ENST00000447669 PGBD3Q8N328 593 aa24.59■■□□□ 1.53
RFFL-206ENST00000447669 ULK4Q96C45 1275 aa24.59■■□□□ 1.53
RFFL-206ENST00000447669 LENG8Q96PV6 779 aaPredicted RBP24.59■■□□□ 1.53
RFFL-206ENST00000447669 CAMSAP3Q9P1Y5 1249 aaPredicted RBP24.59■■□□□ 1.53
RFFL-206ENST00000447669 XPR1Q9UBH6 696 aa24.59■■□□□ 1.53
RFFL-206ENST00000447669 GNPTGQ9UJJ9 305 aa24.59■■□□□ 1.53
RFFL-206ENST00000447669 OAS3Q9Y6K5 1087 aaKnown RBP24.59■■□□□ 1.53
RFFL-206ENST00000447669 OR2AG2A6NM03 316 aa24.58■■□□□ 1.53
RFFL-206ENST00000447669 STK25O00506 426 aa24.58■■□□□ 1.53
RFFL-206ENST00000447669 LTA4HP09960 611 aaKnown RBP24.58■■□□□ 1.53
RFFL-206ENST00000447669 ALDH3A1P30838 453 aa24.58■■□□□ 1.53
RFFL-206ENST00000447669 TPMTP51580 245 aa24.58■■□□□ 1.53
RFFL-206ENST00000447669 STARD6P59095 220 aa24.58■■□□□ 1.53
RFFL-206ENST00000447669 PPP2CBP62714 309 aa24.58■■□□□ 1.53
RFFL-206ENST00000447669 PPP2CAP67775 309 aa24.58■■□□□ 1.53
RFFL-206ENST00000447669 PCLAFQ15004 111 aa24.58■■□□□ 1.53
RFFL-206ENST00000447669 WSCD2Q2TBF2 565 aa24.58■■□□□ 1.53
RFFL-206ENST00000447669 C10orf107Q8IVU9 208 aa24.58■■□□□ 1.53
RFFL-206ENST00000447669 LRRC34Q8IZ02 419 aa24.58■■□□□ 1.53
RFFL-206ENST00000447669 EEF1AKMT1Q8WVE0 214 aa24.58■■□□□ 1.53
RFFL-206ENST00000447669 KCNJ9Q92806 393 aa24.58■■□□□ 1.53
RFFL-206ENST00000447669 FAM131CQ96AQ9 280 aa24.58■■□□□ 1.53
RFFL-206ENST00000447669 MAGEB18Q96M61 343 aa24.58■■□□□ 1.53
RFFL-206ENST00000447669 ZNF317Q96PQ6 595 aaPredicted RBP24.58■■□□□ 1.53
RFFL-206ENST00000447669 FBRSQ9HAH7 460 aa24.58■■□□□ 1.53
RFFL-206ENST00000447669 SLCO1B3Q9NPD5 702 aa24.58■■□□□ 1.53
RFFL-206ENST00000447669 RAD18Q9NS91 495 aa24.58■■□□□ 1.53
RFFL-206ENST00000447669 SMOXQ9NWM0 555 aa24.58■■□□□ 1.53
RFFL-206ENST00000447669 PCDHB1Q9Y5F3 818 aa24.58■■□□□ 1.53
RFFL-206ENST00000447669 A0A1W2PQU0 124 aa24.57■■□□□ 1.52
RFFL-206ENST00000447669 PDK4Q16654 411 aa24.57■■□□□ 1.52
RFFL-206ENST00000447669 TTC31Q49AM3 519 aaPredicted RBP24.57■■□□□ 1.52
RFFL-206ENST00000447669 ANO7Q6IWH7 933 aa24.57■■□□□ 1.52
RFFL-206ENST00000447669 FAM47EQ6ZV65 393 aa24.57■■□□□ 1.52
RFFL-206ENST00000447669 ZNF75CPQ92670 426 aaPredicted RBP24.57■■□□□ 1.52
RFFL-206ENST00000447669 PTERQ96BW5 349 aa24.57■■□□□ 1.52
RFFL-206ENST00000447669 HHIPQ96QV1 700 aa24.57■■□□□ 1.52
RFFL-206ENST00000447669 MYOCQ99972 504 aa24.57■■□□□ 1.52
RFFL-206ENST00000447669 CDH19Q9H159 772 aa24.57■■□□□ 1.52
RFFL-206ENST00000447669 ALG9Q9H6U8 611 aa24.57■■□□□ 1.52
RFFL-206ENST00000447669 ZNF395Q9H8N7 513 aaPredicted RBP24.57■■□□□ 1.52
RFFL-206ENST00000447669 FZD3Q9NPG1 666 aa24.57■■□□□ 1.52
RFFL-206ENST00000447669 TRMT6Q9UJA5 497 aaKnown RBP24.57■■□□□ 1.52
RFFL-206ENST00000447669 G3V2L1 256 aa24.57■■□□□ 1.52
RFFL-206ENST00000447669 SGTAO43765 313 aa24.57■■□□□ 1.52
RFFL-206ENST00000447669 RNGTTO60942 597 aaKnown RBP24.57■■□□□ 1.52
RFFL-206ENST00000447669 BPGMP07738 259 aa24.57■■□□□ 1.52
RFFL-206ENST00000447669 VIMP08670 466 aaKnown RBP24.57■■□□□ 1.52
RFFL-206ENST00000447669 NEFHP12036 1026 aa24.57■■□□□ 1.52
RFFL-206ENST00000447669 ATP1B2P14415 290 aaPredicted RBP24.57■■□□□ 1.52
RFFL-206ENST00000447669 ITIH4Q14624 930 aa24.57■■□□□ 1.52
RFFL-206ENST00000447669 MACC1Q6ZN28 852 aa24.57■■□□□ 1.52
RFFL-206ENST00000447669 TSNARE1Q96NA8 513 aa24.57■■□□□ 1.52
RFFL-206ENST00000447669 COL6A2P12110 1019 aa24.56■■□□□ 1.52
RFFL-206ENST00000447669 CD1DP15813 335 aa24.56■■□□□ 1.52
RFFL-206ENST00000447669 TFEBP19484 476 aa24.56■■□□□ 1.52
RFFL-206ENST00000447669 MSH3P20585 1137 aa24.56■■□□□ 1.52
RFFL-206ENST00000447669 CTSCP53634 463 aa24.56■■□□□ 1.52
RFFL-206ENST00000447669 HSF5Q4G112 596 aaPredicted RBP24.56■■□□□ 1.52
RFFL-206ENST00000447669 NUDCD3Q8IVD9 361 aa24.56■■□□□ 1.52
RFFL-206ENST00000447669 FRMD1Q8N878 549 aa24.56■■□□□ 1.52
RFFL-206ENST00000447669 RASGEF1AQ8N9B8 481 aa24.56■■□□□ 1.52
RFFL-206ENST00000447669 DDHD1Q8NEL9 900 aa24.56■■□□□ 1.52
RFFL-206ENST00000447669 DCUN1D1Q96GG9 259 aa24.56■■□□□ 1.52
RFFL-206ENST00000447669 NECAB3Q96P71 396 aaPredicted RBP24.56■■□□□ 1.52
RFFL-206ENST00000447669 CCDC134Q9H6E4 229 aa24.56■■□□□ 1.52
RFFL-206ENST00000447669 COPG2Q9UBF2 871 aa24.56■■□□□ 1.52
RFFL-206ENST00000447669 FAM8A1Q9UBU6 413 aa24.56■■□□□ 1.52
RFFL-206ENST00000447669 GMNCA6NCL1 334 aa24.56■■□□□ 1.52
RFFL-206ENST00000447669 NEMP2A6NFY4 417 aa24.56■■□□□ 1.52
RFFL-206ENST00000447669 RAD51BO15315 384 aa24.56■■□□□ 1.52
RFFL-206ENST00000447669 TSPAN12O95859 305 aa24.56■■□□□ 1.52
RFFL-206ENST00000447669 FAM83EQ2M2I3 478 aa24.56■■□□□ 1.52
RFFL-206ENST00000447669 CCDC153Q494R4 210 aa24.56■■□□□ 1.52
RFFL-206ENST00000447669 VPS35Q96QK1 796 aa24.56■■□□□ 1.52
RFFL-206ENST00000447669 LGR4Q9BXB1 951 aa24.56■■□□□ 1.52
RFFL-206ENST00000447669 EPN3Q9H201 632 aa24.56■■□□□ 1.52
RFFL-206ENST00000447669 TBC1D17Q9HA65 648 aa24.56■■□□□ 1.52
RFFL-206ENST00000447669 PSD3Q9NYI0 1048 aa24.56■■□□□ 1.52
RFFL-206ENST00000447669 PYGLP06737 847 aa24.55■■□□□ 1.52
RFFL-206ENST00000447669 CPA3P15088 417 aa24.55■■□□□ 1.52
RFFL-206ENST00000447669 PXNP49023 591 aaPredicted RBP24.55■■□□□ 1.52
RFFL-206ENST00000447669 DPTQ07507 201 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms