RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 CARD16Q5EG05 197 aa7.84□□□□□ -1.15
SMARCE1-206ENST00000447024 CCDC122Q5T0U0 273 aa7.84□□□□□ -1.15
SMARCE1-206ENST00000447024 DPY19L3Q6ZPD9 716 aa7.84□□□□□ -1.15
SMARCE1-206ENST00000447024 H2AFVQ71UI9 128 aa7.84□□□□□ -1.15
SMARCE1-206ENST00000447024 ERN2Q76MJ5 926 aaKnown RBP7.84□□□□□ -1.15
SMARCE1-206ENST00000447024 PIP4P1Q86T03 277 aa7.84□□□□□ -1.15
SMARCE1-206ENST00000447024 PRPF39Q86UA1 669 aaKnown RBP7.84□□□□□ -1.15
SMARCE1-206ENST00000447024 MINDY1Q8N5J2 469 aa7.84□□□□□ -1.15
SMARCE1-206ENST00000447024 OR2AP1Q8NGE2 309 aa7.84□□□□□ -1.15
SMARCE1-206ENST00000447024 OR14C36Q8NHC7 312 aa7.84□□□□□ -1.15
SMARCE1-206ENST00000447024 PCDH19Q8TAB3 1148 aa7.84□□□□□ -1.15
SMARCE1-206ENST00000447024 ASB12Q8WXK4 309 aa7.84□□□□□ -1.15
SMARCE1-206ENST00000447024 CTNNBL1Q8WYA6 563 aaPredicted RBP7.84□□□□□ -1.15
SMARCE1-206ENST00000447024 ZG16BQ96DA0 208 aa7.84□□□□□ -1.15
SMARCE1-206ENST00000447024 SNRNP25Q9BV90 132 aaKnown RBP7.84□□□□□ -1.15
SMARCE1-206ENST00000447024 CPEB1Q9BZB8 566 aaKnown RBP7.84□□□□□ -1.15
SMARCE1-206ENST00000447024 MTG2Q9H4K7 406 aa7.84□□□□□ -1.15
SMARCE1-206ENST00000447024 DHX35Q9H5Z1 703 aaKnown RBP7.84□□□□□ -1.15
SMARCE1-206ENST00000447024 C6orf106Q9H6K1 298 aaPredicted RBP7.84□□□□□ -1.15
SMARCE1-206ENST00000447024 TM9SF3Q9HD45 589 aa7.84□□□□□ -1.15
SMARCE1-206ENST00000447024 RXFP3Q9NSD7 469 aa7.84□□□□□ -1.15
SMARCE1-206ENST00000447024 DKK3Q9UBP4 350 aa7.84□□□□□ -1.15
SMARCE1-206ENST00000447024 IL36AQ9UHA7 158 aa7.84□□□□□ -1.15
SMARCE1-206ENST00000447024 DNAI1Q9UI46 699 aa7.84□□□□□ -1.15
SMARCE1-206ENST00000447024 INTUQ9ULD6 942 aa7.84□□□□□ -1.15
SMARCE1-206ENST00000447024 NENFQ9UMX5 172 aa7.84□□□□□ -1.15
SMARCE1-206ENST00000447024 REXO2Q9Y3B8 237 aaKnown RBP7.84□□□□□ -1.15
SMARCE1-206ENST00000447024 DMRT1Q9Y5R6 373 aa7.84□□□□□ -1.15
SMARCE1-206ENST00000447024 TBC1D3DA0A087WVF3 549 aa7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 TBC1D3IA0A087WXS9 549 aa7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 TBC1D3EA0A087X179 549 aa7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 TBC1D3KA0A087X1G2 549 aa7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 KRTAP23-1A1A580 65 aa7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 TBC1D3FA6NER0 549 aaPredicted RBP7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 ZNF487B1APH4 448 aa7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 TBC1D3LB9A6J9 549 aa7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 RASA4BC9J798 803 aa7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 PRAMEF26H0Y7S4 382 aa7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 ZNF561-AS1K7EIQ3 104 aa7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 K7ERQ8 282 aa7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 KCNK3O14649 394 aa7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 DAPK3O43293 454 aa7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 RASA4O43374 803 aa7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 SMAD6O43541 496 aaKnown RBP7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 BUB1O43683 1085 aa7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 PCDHGA12O60330 932 aa7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 ZNF821O75541 412 aaPredicted RBP7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 FSBPO95073 299 aa7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 KCNK5O95279 499 aa7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 IGSF6O95976 241 aa7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 IGHV4-34P06331 123 aa7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 TBC1D3HP0C7X1 549 aa7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 SERPINB6P35237 376 aa7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 HSPA9P38646 679 aaKnown RBP7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 CSNK1DP48730 415 aa7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 RENBPP51606 427 aa7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 CCNHP51946 323 aaPredicted RBP7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 NSUN2Q08J23 767 aaKnown RBP eCLIP7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 GRIK2Q13002 908 aa7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 ASTE1Q2TB18 679 aaPredicted RBP7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 MYLK3Q32MK0 819 aa7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 INAVAQ3KP66 663 aa7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 SETMARQ53H47 684 aaPredicted RBP7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 RAB6CQ53S08 254 aa7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 ZNF805Q5CZA5 627 aa7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 AFMIDQ63HM1 303 aa7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 TBC1D3GQ6DHY5 549 aa7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 TBC1D3CQ6IPX1 549 aa7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 NAPEPLDQ6IQ20 393 aa7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 KIAA1161Q6NSJ0 714 aa7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 RFX8Q6ZV50 586 aa7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 CYP4V2Q6ZWL3 525 aaPredicted RBP7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 VSIG1Q86XK7 387 aa7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 CACUL1Q86Y37 369 aa7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 MAP7D3Q8IWC1 876 aa7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 RHOT2Q8IXI1 618 aa7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 TBC1D3Q8IZP1 549 aaPredicted RBP7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 PYROXD2Q8N2H3 581 aa7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 ZCCHC9Q8N567 271 aaKnown RBP7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 DEFB119Q8N690 84 aa7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 ARFGAP1Q8N6T3 406 aa7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 SNX19Q92543 992 aa7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 ERLEC1Q96DZ1 483 aa7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 CCDC42Q96M95 316 aa7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 GDAP1L1Q96MZ0 367 aa7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 ZNF599Q96NL3 588 aa7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 TUBGCP5Q96RT8 1024 aa7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 ORAI3Q9BRQ5 295 aa7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 NUP85Q9BW27 656 aa7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 RAB6CQ9H0N0 254 aa7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 THAP2Q9H0W7 228 aa7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 OR10A5Q9H207 317 aa7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 LRRC19Q9H756 370 aa7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 ERVMER34-1Q9H9K5 563 aa7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 ABHD10Q9NUJ1 306 aa7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 HAUS2Q9NVX0 235 aa7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 PARPBPQ9NWS1 579 aa7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 UCKL1Q9NWZ5 548 aa7.83□□□□□ -1.16
SMARCE1-206ENST00000447024 SERGEFQ9UGK8 458 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms