RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 BOCQ9BWV1 1114 aa18.66■□□□□ 0.58
SEMA3D-202ENST00000444867 DCLRE1BQ9H816 532 aa18.66■□□□□ 0.58
SEMA3D-202ENST00000444867 ZBTB26Q9HCK0 441 aa18.66■□□□□ 0.58
SEMA3D-202ENST00000444867 CD248Q9HCU0 757 aa18.66■□□□□ 0.58
SEMA3D-202ENST00000444867 MID1IP1Q9NPA3 183 aa18.66■□□□□ 0.58
SEMA3D-202ENST00000444867 PKD2L2Q9NZM6 624 aa18.66■□□□□ 0.58
SEMA3D-202ENST00000444867 B4GALT6Q9UBX8 382 aa18.66■□□□□ 0.58
SEMA3D-202ENST00000444867 WASF2Q9Y6W5 498 aa18.66■□□□□ 0.58
SEMA3D-202ENST00000444867 MYO7AQ13402 2215 aa18.65■□□□□ 0.58
SEMA3D-202ENST00000444867 IQCF5A8MTL0 148 aa18.65■□□□□ 0.58
SEMA3D-202ENST00000444867 MEI4A8MW99 385 aa18.65■□□□□ 0.58
SEMA3D-202ENST00000444867 MLYCDO95822 493 aa18.65■□□□□ 0.58
SEMA3D-202ENST00000444867 C1SP09871 688 aa18.65■□□□□ 0.58
SEMA3D-202ENST00000444867 VIPR1P32241 457 aa18.65■□□□□ 0.58
SEMA3D-202ENST00000444867 SPINT3P49223 89 aa18.65■□□□□ 0.58
SEMA3D-202ENST00000444867 SH3BP2P78314 561 aa18.65■□□□□ 0.58
SEMA3D-202ENST00000444867 CUL3Q13618 768 aa18.65■□□□□ 0.58
SEMA3D-202ENST00000444867 CYLC2Q14093 348 aaPredicted RBP18.65■□□□□ 0.58
SEMA3D-202ENST00000444867 ARHGEF7Q14155 803 aa18.65■□□□□ 0.58
SEMA3D-202ENST00000444867 SQLEQ14534 574 aa18.65■□□□□ 0.58
SEMA3D-202ENST00000444867 TRMT5Q32P41 509 aaKnown RBP18.65■□□□□ 0.58
SEMA3D-202ENST00000444867 UGT3A2Q3SY77 523 aa18.65■□□□□ 0.58
SEMA3D-202ENST00000444867 KANK2Q63ZY3 851 aa18.65■□□□□ 0.58
SEMA3D-202ENST00000444867 FAM109BQ6ICB4 259 aaPredicted RBP18.65■□□□□ 0.58
SEMA3D-202ENST00000444867 EFL1Q7Z2Z2 1120 aaKnown RBP18.65■□□□□ 0.58
SEMA3D-202ENST00000444867 DTX3LQ8TDB6 740 aa18.65■□□□□ 0.58
SEMA3D-202ENST00000444867 LRRC3BQ96PB8 259 aa18.65■□□□□ 0.58
SEMA3D-202ENST00000444867 RAD18Q9NS91 495 aa18.65■□□□□ 0.58
SEMA3D-202ENST00000444867 CD274Q9NZQ7 290 aa18.65■□□□□ 0.58
SEMA3D-202ENST00000444867 DKK3Q9UBP4 350 aa18.65■□□□□ 0.58
SEMA3D-202ENST00000444867 COPG1Q9Y678 874 aaKnown RBP18.65■□□□□ 0.58
SEMA3D-202ENST00000444867 PDE4DIPQ5VU43 2346 aa18.65■□□□□ 0.58
SEMA3D-202ENST00000444867 LOC100653049A0A140TA62 436 aa18.64■□□□□ 0.57
SEMA3D-202ENST00000444867 A8MX80 341 aa18.64■□□□□ 0.57
SEMA3D-202ENST00000444867 KRT34O76011 436 aa18.64■□□□□ 0.57
SEMA3D-202ENST00000444867 SLC25A14O95258 325 aaPredicted RBP18.64■□□□□ 0.57
SEMA3D-202ENST00000444867 NFATC1O95644 943 aa18.64■□□□□ 0.57
SEMA3D-202ENST00000444867 GM2AP17900 193 aa18.64■□□□□ 0.57
SEMA3D-202ENST00000444867 CA5AP35218 305 aa18.64■□□□□ 0.57
SEMA3D-202ENST00000444867 ATP4BP51164 291 aa18.64■□□□□ 0.57
SEMA3D-202ENST00000444867 IRX1P78414 480 aaPredicted RBP18.64■□□□□ 0.57
SEMA3D-202ENST00000444867 SLC25A3Q00325 362 aa18.64■□□□□ 0.57
SEMA3D-202ENST00000444867 TTLL9Q3SXZ7 439 aa18.64■□□□□ 0.57
SEMA3D-202ENST00000444867 TMEM198Q66K66 360 aa18.64■□□□□ 0.57
SEMA3D-202ENST00000444867 MYO1HQ8N1T3 1032 aa18.64■□□□□ 0.57
SEMA3D-202ENST00000444867 ZBTB2Q8N680 514 aa18.64■□□□□ 0.57
SEMA3D-202ENST00000444867 BPIFB1Q8TDL5 484 aa18.64■□□□□ 0.57
SEMA3D-202ENST00000444867 CYB5D2Q8WUJ1 264 aa18.64■□□□□ 0.57
SEMA3D-202ENST00000444867 C19orf60Q96EN9 201 aa18.64■□□□□ 0.57
SEMA3D-202ENST00000444867 PANX3Q96QZ0 392 aa18.64■□□□□ 0.57
SEMA3D-202ENST00000444867 NUSAP1Q9BXS6 441 aaKnown RBP18.64■□□□□ 0.57
SEMA3D-202ENST00000444867 SPATS2LQ9NUQ6 558 aaKnown RBP18.64■□□□□ 0.57
SEMA3D-202ENST00000444867 DZANK1Q9NVP4 752 aa18.64■□□□□ 0.57
SEMA3D-202ENST00000444867 NDE1Q9NXR1 346 aa18.64■□□□□ 0.57
SEMA3D-202ENST00000444867 OBP2AQ9NY56 170 aa18.64■□□□□ 0.57
SEMA3D-202ENST00000444867 IL36AQ9UHA7 158 aa18.64■□□□□ 0.57
SEMA3D-202ENST00000444867 PCTPQ9UKL6 214 aa18.64■□□□□ 0.57
SEMA3D-202ENST00000444867 TNPO3Q9Y5L0 923 aaKnown RBP18.64■□□□□ 0.57
SEMA3D-202ENST00000444867 PRSS21Q9Y6M0 314 aa18.64■□□□□ 0.57
SEMA3D-202ENST00000444867 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.64■□□□□ 0.57
SEMA3D-202ENST00000444867 PLXNA2O75051 1894 aa18.64■□□□□ 0.57
SEMA3D-202ENST00000444867 KIF26AQ9ULI4 1882 aaPredicted RBP18.64■□□□□ 0.57
SEMA3D-202ENST00000444867 PIKFYVEQ9Y2I7 2098 aa18.64■□□□□ 0.57
SEMA3D-202ENST00000444867 IGLV3-16A0A075B6K0 115 aa18.63■□□□□ 0.57
SEMA3D-202ENST00000444867 A0A088AWK7 358 aa18.63■□□□□ 0.57
SEMA3D-202ENST00000444867 LRRC14BA6NHZ5 514 aa18.63■□□□□ 0.57
SEMA3D-202ENST00000444867 TTC34A8MYJ7 566 aa18.63■□□□□ 0.57
SEMA3D-202ENST00000444867 TRIM24O15164 1050 aa18.63■□□□□ 0.57
SEMA3D-202ENST00000444867 UBDO15205 165 aa18.63■□□□□ 0.57
SEMA3D-202ENST00000444867 ENTPD5O75356 428 aa18.63■□□□□ 0.57
SEMA3D-202ENST00000444867 S100BP04271 92 aaPredicted RBP18.63■□□□□ 0.57
SEMA3D-202ENST00000444867 CBSLP0DN79 551 aa18.63■□□□□ 0.57
SEMA3D-202ENST00000444867 TSPAN8P19075 237 aa18.63■□□□□ 0.57
SEMA3D-202ENST00000444867 ITGAXP20702 1163 aa18.63■□□□□ 0.57
SEMA3D-202ENST00000444867 CBSP35520 551 aa18.63■□□□□ 0.57
SEMA3D-202ENST00000444867 HK3P52790 923 aa18.63■□□□□ 0.57
SEMA3D-202ENST00000444867 DCDC1P59894 354 aa18.63■□□□□ 0.57
SEMA3D-202ENST00000444867 KPNB1Q14974 876 aaKnown RBP18.63■□□□□ 0.57
SEMA3D-202ENST00000444867 MAPRE2Q15555 327 aa18.63■□□□□ 0.57
SEMA3D-202ENST00000444867 TGFBIQ15582 683 aa18.63■□□□□ 0.57
SEMA3D-202ENST00000444867 GPRC6AQ5T6X5 926 aa18.63■□□□□ 0.57
SEMA3D-202ENST00000444867 CLEC6AQ6EIG7 209 aa18.63■□□□□ 0.57
SEMA3D-202ENST00000444867 C16orf89Q6UX73 402 aa18.63■□□□□ 0.57
SEMA3D-202ENST00000444867 TMC5Q6UXY8 1006 aa18.63■□□□□ 0.57
SEMA3D-202ENST00000444867 FRA10AC1Q70Z53 315 aa18.63■□□□□ 0.57
SEMA3D-202ENST00000444867 SNX32Q86XE0 403 aa18.63■□□□□ 0.57
SEMA3D-202ENST00000444867 C12orf76Q8N812 135 aaPredicted RBP18.63■□□□□ 0.57
SEMA3D-202ENST00000444867 TRPC4APQ8TEL6 797 aa18.63■□□□□ 0.57
SEMA3D-202ENST00000444867 SMARCD2Q92925 531 aa18.63■□□□□ 0.57
SEMA3D-202ENST00000444867 RSPRY1Q96DX4 576 aa18.63■□□□□ 0.57
SEMA3D-202ENST00000444867 CDCA3Q99618 268 aaPredicted RBP18.63■□□□□ 0.57
SEMA3D-202ENST00000444867 COPS8Q99627 209 aa18.63■□□□□ 0.57
SEMA3D-202ENST00000444867 NOP53Q9NZM5 478 aaKnown RBP18.63■□□□□ 0.57
SEMA3D-202ENST00000444867 NFKBIL1Q9UBC1 381 aaPredicted RBP18.63■□□□□ 0.57
SEMA3D-202ENST00000444867 UPK3BL1B0FP48 263 aa18.63■□□□□ 0.57
SEMA3D-202ENST00000444867 UPK3BL2E5RIL1 263 aa18.63■□□□□ 0.57
SEMA3D-202ENST00000444867 EIF3FO00303 357 aaPredicted RBP18.63■□□□□ 0.57
SEMA3D-202ENST00000444867 RAD51BO15315 384 aa18.63■□□□□ 0.57
SEMA3D-202ENST00000444867 VPS4BO75351 444 aa18.63■□□□□ 0.57
SEMA3D-202ENST00000444867 GPC4O75487 556 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms