RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 TRA2AQ13595 282 aaKnown RBP eCLIP19.81■□□□□ 0.76
LRCH3-208ENST00000443727 CHCHD2P9Q5T1J5 151 aaPredicted RBP19.81■□□□□ 0.76
LRCH3-208ENST00000443727 ARHGAP40Q5TG30 622 aa19.81■□□□□ 0.76
LRCH3-208ENST00000443727 TMEM164Q5U3C3 297 aa19.81■□□□□ 0.76
LRCH3-208ENST00000443727 TRAPPC5Q8IUR0 188 aa19.81■□□□□ 0.76
LRCH3-208ENST00000443727 TRIM48Q8IWZ4 208 aa19.81■□□□□ 0.76
LRCH3-208ENST00000443727 USP7Q93009 1102 aa19.81■□□□□ 0.76
LRCH3-208ENST00000443727 LRRC45Q96CN5 670 aa19.81■□□□□ 0.76
LRCH3-208ENST00000443727 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.81■□□□□ 0.76
LRCH3-208ENST00000443727 IL17CQ9P0M4 197 aa19.81■□□□□ 0.76
LRCH3-208ENST00000443727 PACSIN2Q9UNF0 486 aaPredicted RBP19.81■□□□□ 0.76
LRCH3-208ENST00000443727 ADGRG1Q9Y653 693 aa19.81■□□□□ 0.76
LRCH3-208ENST00000443727 PRAMEF33A0A0G2JMD5 474 aa19.8■□□□□ 0.76
LRCH3-208ENST00000443727 GLYATL1P3A0A0U1RQE8 302 aa19.8■□□□□ 0.76
LRCH3-208ENST00000443727 TEX51A0A1B0GUA7 166 aa19.8■□□□□ 0.76
LRCH3-208ENST00000443727 PDZK1P1A8MUH7 402 aa19.8■□□□□ 0.76
LRCH3-208ENST00000443727 PRAMEF10O60809 474 aa19.8■□□□□ 0.76
LRCH3-208ENST00000443727 PPFIA2O75334 1257 aa19.8■□□□□ 0.76
LRCH3-208ENST00000443727 VCLP18206 1134 aa19.8■□□□□ 0.76
LRCH3-208ENST00000443727 PSMB4P28070 264 aa19.8■□□□□ 0.76
LRCH3-208ENST00000443727 CSF2RBP32927 897 aa19.8■□□□□ 0.76
LRCH3-208ENST00000443727 CSTF2P33240 577 aaKnown RBP eCLIP19.8■□□□□ 0.76
LRCH3-208ENST00000443727 ETV5P41161 510 aa19.8■□□□□ 0.76
LRCH3-208ENST00000443727 CLCNKAP51800 687 aa19.8■□□□□ 0.76
LRCH3-208ENST00000443727 CLN3Q13286 438 aa19.8■□□□□ 0.76
LRCH3-208ENST00000443727 SQSTM1Q13501 440 aa19.8■□□□□ 0.76
LRCH3-208ENST00000443727 CHRNA6Q15825 494 aa19.8■□□□□ 0.76
LRCH3-208ENST00000443727 SEPT7Q16181 437 aaKnown RBP19.8■□□□□ 0.76
LRCH3-208ENST00000443727 TTC13Q8NBP0 860 aa19.8■□□□□ 0.76
LRCH3-208ENST00000443727 AGBL5Q8NDL9 886 aa19.8■□□□□ 0.76
LRCH3-208ENST00000443727 CCDC112Q8NEF3 446 aa19.8■□□□□ 0.76
LRCH3-208ENST00000443727 CCDC110Q8TBZ0 833 aa19.8■□□□□ 0.76
LRCH3-208ENST00000443727 BRSK1Q8TDC3 778 aa19.8■□□□□ 0.76
LRCH3-208ENST00000443727 SPATA13Q96N96 652 aa19.8■□□□□ 0.76
LRCH3-208ENST00000443727 PPP1R2P1Q96PQ5 205 aa19.8■□□□□ 0.76
LRCH3-208ENST00000443727 APOL2Q9BQE5 337 aa19.8■□□□□ 0.76
LRCH3-208ENST00000443727 ZCCHC2Q9C0B9 1178 aaKnown RBP19.8■□□□□ 0.76
LRCH3-208ENST00000443727 CPNE7Q9UBL6 633 aa19.8■□□□□ 0.76
LRCH3-208ENST00000443727 SLC23A2Q9UGH3 650 aa19.8■□□□□ 0.76
LRCH3-208ENST00000443727 A6NCN8 305 aa19.79■□□□□ 0.76
LRCH3-208ENST00000443727 C2orf81A6NN90 581 aa19.79■□□□□ 0.76
LRCH3-208ENST00000443727 UGT1A9O60656 530 aa19.79■□□□□ 0.76
LRCH3-208ENST00000443727 UGT1A6P19224 532 aa19.79■□□□□ 0.76
LRCH3-208ENST00000443727 UGT1A1P22309 533 aa19.79■□□□□ 0.76
LRCH3-208ENST00000443727 UGT1A4P22310 534 aa19.79■□□□□ 0.76
LRCH3-208ENST00000443727 UGT1A3P35503 534 aa19.79■□□□□ 0.76
LRCH3-208ENST00000443727 VAC14Q08AM6 782 aa19.79■□□□□ 0.76
LRCH3-208ENST00000443727 TMEM115Q12893 351 aaPredicted RBP19.79■□□□□ 0.76
LRCH3-208ENST00000443727 ITGA9Q13797 1035 aa19.79■□□□□ 0.76
LRCH3-208ENST00000443727 KHDC1Q4VXA5 237 aaKnown RBP19.79■□□□□ 0.76
LRCH3-208ENST00000443727 SNAP47Q5SQN1 464 aa19.79■□□□□ 0.76
LRCH3-208ENST00000443727 LDLRAP1Q5SW96 308 aa19.79■□□□□ 0.76
LRCH3-208ENST00000443727 TMEM71Q6P5X7 295 aa19.79■□□□□ 0.76
LRCH3-208ENST00000443727 CCDC81Q6ZN84 652 aa19.79■□□□□ 0.76
LRCH3-208ENST00000443727 NCSTNQ92542 709 aa19.79■□□□□ 0.76
LRCH3-208ENST00000443727 TIMM29Q9BSF4 260 aa19.79■□□□□ 0.76
LRCH3-208ENST00000443727 UGT1A7Q9HAW7 530 aa19.79■□□□□ 0.76
LRCH3-208ENST00000443727 UGT1A10Q9HAW8 530 aa19.79■□□□□ 0.76
LRCH3-208ENST00000443727 UGT1A8Q9HAW9 530 aa19.79■□□□□ 0.76
LRCH3-208ENST00000443727 TMEM9Q9P0T7 183 aa19.79■□□□□ 0.76
LRCH3-208ENST00000443727 TMPRSS11EQ9UL52 423 aa19.79■□□□□ 0.76
LRCH3-208ENST00000443727 A0A0U1RQJ8 604 aa19.78■□□□□ 0.76
LRCH3-208ENST00000443727 VIPP01282 170 aa19.78■□□□□ 0.76
LRCH3-208ENST00000443727 CCL4P13236 92 aa19.78■□□□□ 0.76
LRCH3-208ENST00000443727 LPOP22079 712 aaPredicted RBP19.78■□□□□ 0.76
LRCH3-208ENST00000443727 IDSP22304 550 aa19.78■□□□□ 0.76
LRCH3-208ENST00000443727 ARHGEF18Q6ZSZ5 1173 aa19.78■□□□□ 0.76
LRCH3-208ENST00000443727 DTX3LQ8TDB6 740 aa19.78■□□□□ 0.76
LRCH3-208ENST00000443727 BBC3Q96PG8 261 aaPredicted RBP19.78■□□□□ 0.76
LRCH3-208ENST00000443727 CCNL2Q96S94 520 aaPredicted RBP19.78■□□□□ 0.76
LRCH3-208ENST00000443727 GORASP1Q9BQQ3 440 aa19.78■□□□□ 0.76
LRCH3-208ENST00000443727 PCDHB11Q9Y5F2 797 aa19.78■□□□□ 0.76
LRCH3-208ENST00000443727 ARL5AQ9Y689 179 aa19.78■□□□□ 0.76
LRCH3-208ENST00000443727 ZFC3H1O60293 1989 aaKnown RBP19.77■□□□□ 0.76
LRCH3-208ENST00000443727 A8MU76 341 aa19.77■□□□□ 0.76
LRCH3-208ENST00000443727 THRAP10827 490 aa19.77■□□□□ 0.76
LRCH3-208ENST00000443727 AKT1P31749 480 aa19.77■□□□□ 0.76
LRCH3-208ENST00000443727 EPHA4P54764 986 aa19.77■□□□□ 0.76
LRCH3-208ENST00000443727 CFHR1Q03591 330 aa19.77■□□□□ 0.76
LRCH3-208ENST00000443727 OLIG2Q13516 323 aa19.77■□□□□ 0.76
LRCH3-208ENST00000443727 PTPRCAPQ14761 206 aa19.77■□□□□ 0.76
LRCH3-208ENST00000443727 TAF1AQ15573 450 aaPredicted RBP19.77■□□□□ 0.76
LRCH3-208ENST00000443727 WDR74Q6RFH5 385 aaPredicted RBP19.77■□□□□ 0.76
LRCH3-208ENST00000443727 RANBP10Q6VN20 620 aa19.77■□□□□ 0.76
LRCH3-208ENST00000443727 FAM129CQ86XR2 697 aa19.77■□□□□ 0.76
LRCH3-208ENST00000443727 ZNF547Q8IVP9 402 aa19.77■□□□□ 0.76
LRCH3-208ENST00000443727 OR4K2Q8NGD2 314 aa19.77■□□□□ 0.76
LRCH3-208ENST00000443727 TAAR9Q96RI9 348 aa19.77■□□□□ 0.76
LRCH3-208ENST00000443727 FOXJ2Q9P0K8 574 aa19.77■□□□□ 0.76
LRCH3-208ENST00000443727 ACSL6Q9UKU0 697 aa19.77■□□□□ 0.76
LRCH3-208ENST00000443727 C5orf60A6NFR6 353 aa19.76■□□□□ 0.75
LRCH3-208ENST00000443727 C9orf172C9J069 976 aa19.76■□□□□ 0.75
LRCH3-208ENST00000443727 DDX3YO15523 660 aaKnown RBP19.76■□□□□ 0.75
LRCH3-208ENST00000443727 GPR39O43194 453 aa19.76■□□□□ 0.75
LRCH3-208ENST00000443727 PRAMEF1O95521 474 aa19.76■□□□□ 0.75
LRCH3-208ENST00000443727 CRTAMO95727 393 aa19.76■□□□□ 0.75
LRCH3-208ENST00000443727 LIPCP11150 499 aa19.76■□□□□ 0.75
LRCH3-208ENST00000443727 RPL10P27635 214 aaKnown RBP19.76■□□□□ 0.75
LRCH3-208ENST00000443727 ADRA1AP35348 466 aa19.76■□□□□ 0.75
LRCH3-208ENST00000443727 DRG2P55039 364 aaKnown RBP19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms