RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 C11orf96Q7Z7L8 435 aa15.82■□□□□ 0.12
USP39-205ENST00000442708 TMEM135Q86UB9 458 aa15.82■□□□□ 0.12
USP39-205ENST00000442708 CTAGE6Q86UF2 777 aa15.82■□□□□ 0.12
USP39-205ENST00000442708 GALNT13Q8IUC8 556 aa15.82■□□□□ 0.12
USP39-205ENST00000442708 CTAGE4Q8IX94 777 aa15.82■□□□□ 0.12
USP39-205ENST00000442708 FSTL5Q8N475 847 aaPredicted RBP15.82■□□□□ 0.12
USP39-205ENST00000442708 MNS1Q8NEH6 495 aa15.82■□□□□ 0.12
USP39-205ENST00000442708 OR6P1Q8NGX9 317 aa15.82■□□□□ 0.12
USP39-205ENST00000442708 OR4L1Q8NH43 312 aa15.82■□□□□ 0.12
USP39-205ENST00000442708 ULK4Q96C45 1275 aa15.82■□□□□ 0.12
USP39-205ENST00000442708 RMI1Q9H9A7 625 aa15.82■□□□□ 0.12
USP39-205ENST00000442708 SPATS2LQ9NUQ6 558 aaKnown RBP15.82■□□□□ 0.12
USP39-205ENST00000442708 IL1RAPL1Q9NZN1 696 aa15.82■□□□□ 0.12
USP39-205ENST00000442708 SAMD15Q9P1V8 674 aa15.82■□□□□ 0.12
USP39-205ENST00000442708 WHRNQ9P202 907 aa15.82■□□□□ 0.12
USP39-205ENST00000442708 U3KQA8 63 aa15.82■□□□□ 0.12
USP39-205ENST00000442708 PIKFYVEQ9Y2I7 2098 aa15.82■□□□□ 0.12
USP39-205ENST00000442708 FAM237BA0A1B0GVD1 139 aa15.81■□□□□ 0.12
USP39-205ENST00000442708 SPAARA0A1B0GVQ0 90 aa15.81■□□□□ 0.12
USP39-205ENST00000442708 ESYT3A0FGR9 886 aa15.81■□□□□ 0.12
USP39-205ENST00000442708 CNOT1A5YKK6 2376 aaKnown RBP15.81■□□□□ 0.12
USP39-205ENST00000442708 NEMP2A6NFY4 417 aa15.81■□□□□ 0.12
USP39-205ENST00000442708 GOLGA8KD6RF30 607 aa15.81■□□□□ 0.12
USP39-205ENST00000442708 GOLGA8TH3BQL2 631 aa15.81■□□□□ 0.12
USP39-205ENST00000442708 VAPBO95292 243 aa15.81■□□□□ 0.12
USP39-205ENST00000442708 ANXA6P08133 673 aa15.81■□□□□ 0.12
USP39-205ENST00000442708 ACP5P13686 325 aa15.81■□□□□ 0.12
USP39-205ENST00000442708 SDHBP21912 280 aa15.81■□□□□ 0.12
USP39-205ENST00000442708 AKT1P31749 480 aa15.81■□□□□ 0.12
USP39-205ENST00000442708 PRAMEP78395 509 aa15.81■□□□□ 0.12
USP39-205ENST00000442708 ARMC3Q5W041 872 aa15.81■□□□□ 0.12
USP39-205ENST00000442708 ZDHHC24Q6UX98 284 aa15.81■□□□□ 0.12
USP39-205ENST00000442708 TAF8Q7Z7C8 310 aa15.81■□□□□ 0.12
USP39-205ENST00000442708 LDB1Q86U70 411 aaPredicted RBP15.81■□□□□ 0.12
USP39-205ENST00000442708 ART4Q93070 314 aa15.81■□□□□ 0.12
USP39-205ENST00000442708 ZNF669Q96BR6 464 aaPredicted RBP15.81■□□□□ 0.12
USP39-205ENST00000442708 SGF29Q96ES7 293 aa15.81■□□□□ 0.12
USP39-205ENST00000442708 STAMBPL1Q96FJ0 436 aa15.81■□□□□ 0.12
USP39-205ENST00000442708 SGSM3Q96HU1 749 aa15.81■□□□□ 0.12
USP39-205ENST00000442708 COPS8Q99627 209 aa15.81■□□□□ 0.12
USP39-205ENST00000442708 ZDHHC3Q9NYG2 299 aa15.81■□□□□ 0.12
USP39-205ENST00000442708 DMGDHQ9UI17 866 aaKnown RBP15.81■□□□□ 0.12
USP39-205ENST00000442708 KCNK6Q9Y257 313 aa15.81■□□□□ 0.12
USP39-205ENST00000442708 UTP11Q9Y3A2 253 aaKnown RBP15.81■□□□□ 0.12
USP39-205ENST00000442708 MAD1L1Q9Y6D9 718 aa15.81■□□□□ 0.12
USP39-205ENST00000442708 MAGEB16A2A368 324 aa15.8■□□□□ 0.12
USP39-205ENST00000442708 PRR19A6NJB7 356 aa15.8■□□□□ 0.12
USP39-205ENST00000442708 OR2AG2A6NM03 316 aa15.8■□□□□ 0.12
USP39-205ENST00000442708 GPR89AB7ZAQ6 455 aa15.8■□□□□ 0.12
USP39-205ENST00000442708 SMAPO00193 183 aa15.8■□□□□ 0.12
USP39-205ENST00000442708 TPP1O14773 563 aa15.8■□□□□ 0.12
USP39-205ENST00000442708 KMOO15229 486 aa15.8■□□□□ 0.12
USP39-205ENST00000442708 OR1I1O60431 355 aa15.8■□□□□ 0.12
USP39-205ENST00000442708 KCNK5O95279 499 aa15.8■□□□□ 0.12
USP39-205ENST00000442708 EML2O95834 649 aa15.8■□□□□ 0.12
USP39-205ENST00000442708 GPR89BP0CG08 455 aa15.8■□□□□ 0.12
USP39-205ENST00000442708 MSH3P20585 1137 aa15.8■□□□□ 0.12
USP39-205ENST00000442708 ELK3P41970 407 aa15.8■□□□□ 0.12
USP39-205ENST00000442708 ID4P47928 161 aa15.8■□□□□ 0.12
USP39-205ENST00000442708 NOVA1P51513 510 aaKnown RBP15.8■□□□□ 0.12
USP39-205ENST00000442708 ILF3Q12906 894 aaKnown RBP eCLIP15.8■□□□□ 0.12
USP39-205ENST00000442708 DNAJC3Q13217 504 aa15.8■□□□□ 0.12
USP39-205ENST00000442708 FASTKD3Q14CZ7 662 aaKnown RBP15.8■□□□□ 0.12
USP39-205ENST00000442708 HIF1AQ16665 826 aa15.8■□□□□ 0.12
USP39-205ENST00000442708 INAVAQ3KP66 663 aa15.8■□□□□ 0.12
USP39-205ENST00000442708 DNAJC21Q5F1R6 531 aaKnown RBP15.8■□□□□ 0.12
USP39-205ENST00000442708 KIAA0930Q6ICG6 404 aaPredicted RBP15.8■□□□□ 0.12
USP39-205ENST00000442708 SLC30A9Q6PML9 568 aa15.8■□□□□ 0.12
USP39-205ENST00000442708 TMEM220Q6QAJ8 160 aa15.8■□□□□ 0.12
USP39-205ENST00000442708 XKR5Q6UX68 686 aa15.8■□□□□ 0.12
USP39-205ENST00000442708 LRRTM4Q86VH4 590 aa15.8■□□□□ 0.12
USP39-205ENST00000442708 GKN2Q86XP6 184 aa15.8■□□□□ 0.12
USP39-205ENST00000442708 UNC5BQ8IZJ1 945 aa15.8■□□□□ 0.12
USP39-205ENST00000442708 BEND7Q8N7W2 519 aaPredicted RBP15.8■□□□□ 0.12
USP39-205ENST00000442708 SEC14L1Q92503 715 aa15.8■□□□□ 0.12
USP39-205ENST00000442708 CNDP2Q96KP4 475 aaKnown RBP15.8■□□□□ 0.12
USP39-205ENST00000442708 APOLD1Q96LR9 279 aa15.8■□□□□ 0.12
USP39-205ENST00000442708 EBNA1BP2Q99848 306 aaKnown RBP15.8■□□□□ 0.12
USP39-205ENST00000442708 GSDMCQ9BYG8 508 aa15.8■□□□□ 0.12
USP39-205ENST00000442708 RAB17Q9H0T7 212 aa15.8■□□□□ 0.12
USP39-205ENST00000442708 L2HGDHQ9H9P8 463 aa15.8■□□□□ 0.12
USP39-205ENST00000442708 TOR4AQ9NXH8 423 aa15.8■□□□□ 0.12
USP39-205ENST00000442708 TAAR2Q9P1P5 351 aa15.8■□□□□ 0.12
USP39-205ENST00000442708 TEX264Q9Y6I9 313 aa15.8■□□□□ 0.12
USP39-205ENST00000442708 PRSS21Q9Y6M0 314 aa15.8■□□□□ 0.12
USP39-205ENST00000442708 RPS6KL1Q9Y6S9 549 aa15.8■□□□□ 0.12
USP39-205ENST00000442708 GOLGA4Q13439 2230 aaKnown RBP15.79■□□□□ 0.12
USP39-205ENST00000442708 CD3EAPO15446 510 aaKnown RBP15.79■□□□□ 0.12
USP39-205ENST00000442708 LDOC1O95751 146 aaPredicted RBP15.79■□□□□ 0.12
USP39-205ENST00000442708 F7P08709 466 aaPredicted RBP15.79■□□□□ 0.12
USP39-205ENST00000442708 ATP1B2P14415 290 aaPredicted RBP15.79■□□□□ 0.12
USP39-205ENST00000442708 ZNF7P17097 686 aaPredicted RBP15.79■□□□□ 0.12
USP39-205ENST00000442708 ACTR1BP42025 376 aa15.79■□□□□ 0.12
USP39-205ENST00000442708 DRG2P55039 364 aaKnown RBP15.79■□□□□ 0.12
USP39-205ENST00000442708 ARL4CP56559 192 aa15.79■□□□□ 0.12
USP39-205ENST00000442708 ACTR1AP61163 376 aa15.79■□□□□ 0.12
USP39-205ENST00000442708 GUCY2DQ02846 1103 aa15.79■□□□□ 0.12
USP39-205ENST00000442708 CALCOCO2Q13137 446 aa15.79■□□□□ 0.12
USP39-205ENST00000442708 CBLBQ13191 982 aa15.79■□□□□ 0.12
USP39-205ENST00000442708 GTF2H3Q13889 308 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms