RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 LRRTM4Q86VH4 590 aa18.65■□□□□ 0.58
HMGB3P22-201ENST00000442010 SYCE1Q8N0S2 351 aa18.65■□□□□ 0.58
HMGB3P22-201ENST00000442010 SPATA13Q96N96 652 aa18.65■□□□□ 0.58
HMGB3P22-201ENST00000442010 UBL7Q96S82 380 aaPredicted RBP18.65■□□□□ 0.58
HMGB3P22-201ENST00000442010 SLC38A3Q99624 504 aa18.65■□□□□ 0.58
HMGB3P22-201ENST00000442010 DPYSL5Q9BPU6 564 aa18.65■□□□□ 0.58
HMGB3P22-201ENST00000442010 TIMM29Q9BSF4 260 aa18.65■□□□□ 0.58
HMGB3P22-201ENST00000442010 FICDQ9BVA6 458 aa18.65■□□□□ 0.58
HMGB3P22-201ENST00000442010 FSD1LQ9BXM9 530 aa18.65■□□□□ 0.58
HMGB3P22-201ENST00000442010 B3GNT4Q9C0J1 378 aa18.65■□□□□ 0.58
HMGB3P22-201ENST00000442010 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.65■□□□□ 0.58
HMGB3P22-201ENST00000442010 CAPN6Q9Y6Q1 641 aa18.65■□□□□ 0.58
HMGB3P22-201ENST00000442010 FASNP49327 2511 aaKnown RBP18.64■□□□□ 0.57
HMGB3P22-201ENST00000442010 PRAMEF33A0A0G2JMD5 474 aa18.64■□□□□ 0.57
HMGB3P22-201ENST00000442010 TEX51A0A1B0GUA7 166 aa18.64■□□□□ 0.57
HMGB3P22-201ENST00000442010 MIF4GDA9UHW6 222 aaKnown RBP18.64■□□□□ 0.57
HMGB3P22-201ENST00000442010 C9orf172C9J069 976 aa18.64■□□□□ 0.57
HMGB3P22-201ENST00000442010 GPR39O43194 453 aa18.64■□□□□ 0.57
HMGB3P22-201ENST00000442010 BUD23O43709 281 aaKnown RBP18.64■□□□□ 0.57
HMGB3P22-201ENST00000442010 PRAMEF10O60809 474 aa18.64■□□□□ 0.57
HMGB3P22-201ENST00000442010 PPFIA2O75334 1257 aa18.64■□□□□ 0.57
HMGB3P22-201ENST00000442010 FTCDO95954 541 aa18.64■□□□□ 0.57
HMGB3P22-201ENST00000442010 CCL4P13236 92 aa18.64■□□□□ 0.57
HMGB3P22-201ENST00000442010 SLC2A4P14672 509 aa18.64■□□□□ 0.57
HMGB3P22-201ENST00000442010 CETN2P41208 172 aa18.64■□□□□ 0.57
HMGB3P22-201ENST00000442010 TNNT3P45378 269 aaPredicted RBP18.64■□□□□ 0.57
HMGB3P22-201ENST00000442010 TMEM115Q12893 351 aaPredicted RBP18.64■□□□□ 0.57
HMGB3P22-201ENST00000442010 PTPRCAPQ14761 206 aa18.64■□□□□ 0.57
HMGB3P22-201ENST00000442010 PLA2G4EQ3MJ16 856 aa18.64■□□□□ 0.57
HMGB3P22-201ENST00000442010 DARS2Q6PI48 645 aaKnown RBP18.64■□□□□ 0.57
HMGB3P22-201ENST00000442010 FAM151BQ6UXP7 276 aa18.64■□□□□ 0.57
HMGB3P22-201ENST00000442010 JAMLQ86YT9 394 aa18.64■□□□□ 0.57
HMGB3P22-201ENST00000442010 CCDC110Q8TBZ0 833 aa18.64■□□□□ 0.57
HMGB3P22-201ENST00000442010 USP7Q93009 1102 aa18.64■□□□□ 0.57
HMGB3P22-201ENST00000442010 HES6Q96HZ4 224 aa18.64■□□□□ 0.57
HMGB3P22-201ENST00000442010 FERMT1Q9BQL6 677 aa18.64■□□□□ 0.57
HMGB3P22-201ENST00000442010 FOXJ2Q9P0K8 574 aa18.64■□□□□ 0.57
HMGB3P22-201ENST00000442010 CPNE7Q9UBL6 633 aa18.64■□□□□ 0.57
HMGB3P22-201ENST00000442010 AAR2Q9Y312 384 aaKnown RBP18.64■□□□□ 0.57
HMGB3P22-201ENST00000442010 ATMQ13315 3056 aa18.63■□□□□ 0.57
HMGB3P22-201ENST00000442010 GLYATL1P3A0A0U1RQE8 302 aa18.63■□□□□ 0.57
HMGB3P22-201ENST00000442010 UGT1A9O60656 530 aa18.63■□□□□ 0.57
HMGB3P22-201ENST00000442010 FGF3P11487 239 aaPredicted RBP18.63■□□□□ 0.57
HMGB3P22-201ENST00000442010 XRCC1P18887 633 aaPredicted RBP18.63■□□□□ 0.57
HMGB3P22-201ENST00000442010 UGT1A6P19224 532 aa18.63■□□□□ 0.57
HMGB3P22-201ENST00000442010 UGT1A1P22309 533 aa18.63■□□□□ 0.57
HMGB3P22-201ENST00000442010 UGT1A4P22310 534 aa18.63■□□□□ 0.57
HMGB3P22-201ENST00000442010 MPSTP25325 297 aa18.63■□□□□ 0.57
HMGB3P22-201ENST00000442010 UGT1A3P35503 534 aa18.63■□□□□ 0.57
HMGB3P22-201ENST00000442010 ARSDP51689 593 aa18.63■□□□□ 0.57
HMGB3P22-201ENST00000442010 EPHA4P54764 986 aa18.63■□□□□ 0.57
HMGB3P22-201ENST00000442010 NFATC2Q13469 925 aa18.63■□□□□ 0.57
HMGB3P22-201ENST00000442010 INSCQ1MX18 579 aa18.63■□□□□ 0.57
HMGB3P22-201ENST00000442010 DENND5AQ6IQ26 1287 aa18.63■□□□□ 0.57
HMGB3P22-201ENST00000442010 WDR74Q6RFH5 385 aaPredicted RBP18.63■□□□□ 0.57
HMGB3P22-201ENST00000442010 PCSK4Q6UW60 755 aa18.63■□□□□ 0.57
HMGB3P22-201ENST00000442010 ABRAXAS1Q6UWZ7 409 aa18.63■□□□□ 0.57
HMGB3P22-201ENST00000442010 TXLNBQ8N3L3 684 aa18.63■□□□□ 0.57
HMGB3P22-201ENST00000442010 UBL4BQ8N7F7 174 aa18.63■□□□□ 0.57
HMGB3P22-201ENST00000442010 DDHD1Q8NEL9 900 aa18.63■□□□□ 0.57
HMGB3P22-201ENST00000442010 OR10G6Q8NH81 332 aa18.63■□□□□ 0.57
HMGB3P22-201ENST00000442010 BRSK1Q8TDC3 778 aa18.63■□□□□ 0.57
HMGB3P22-201ENST00000442010 SH3KBP1Q96B97 665 aa18.63■□□□□ 0.57
HMGB3P22-201ENST00000442010 UGT1A7Q9HAW7 530 aa18.63■□□□□ 0.57
HMGB3P22-201ENST00000442010 UGT1A10Q9HAW8 530 aa18.63■□□□□ 0.57
HMGB3P22-201ENST00000442010 UGT1A8Q9HAW9 530 aa18.63■□□□□ 0.57
HMGB3P22-201ENST00000442010 SMOXQ9NWM0 555 aa18.63■□□□□ 0.57
HMGB3P22-201ENST00000442010 ZNF624Q9P2J8 865 aaPredicted RBP18.63■□□□□ 0.57
HMGB3P22-201ENST00000442010 PKP3Q9Y446 797 aa18.63■□□□□ 0.57
HMGB3P22-201ENST00000442010 ARL5AQ9Y689 179 aa18.63■□□□□ 0.57
HMGB3P22-201ENST00000442010 C5orf60A6NFR6 353 aa18.62■□□□□ 0.57
HMGB3P22-201ENST00000442010 ATXN7O15265 892 aaPredicted RBP18.62■□□□□ 0.57
HMGB3P22-201ENST00000442010 EFSO43281 561 aa18.62■□□□□ 0.57
HMGB3P22-201ENST00000442010 DUX1O43812 170 aa18.62■□□□□ 0.57
HMGB3P22-201ENST00000442010 BRAFP15056 766 aa18.62■□□□□ 0.57
HMGB3P22-201ENST00000442010 SLC19A1P41440 591 aa18.62■□□□□ 0.57
HMGB3P22-201ENST00000442010 MAPK10P53779 464 aa18.62■□□□□ 0.57
HMGB3P22-201ENST00000442010 VAC14Q08AM6 782 aa18.62■□□□□ 0.57
HMGB3P22-201ENST00000442010 TAF1AQ15573 450 aaPredicted RBP18.62■□□□□ 0.57
HMGB3P22-201ENST00000442010 TGIF1Q15583 401 aa18.62■□□□□ 0.57
HMGB3P22-201ENST00000442010 ARHGAP40Q5TG30 622 aa18.62■□□□□ 0.57
HMGB3P22-201ENST00000442010 WASH2PQ6VEQ5 465 aa18.62■□□□□ 0.57
HMGB3P22-201ENST00000442010 DTX1Q86Y01 620 aa18.62■□□□□ 0.57
HMGB3P22-201ENST00000442010 RASGEF1AQ8N9B8 481 aa18.62■□□□□ 0.57
HMGB3P22-201ENST00000442010 AVL9Q8NBF6 648 aa18.62■□□□□ 0.57
HMGB3P22-201ENST00000442010 TTC13Q8NBP0 860 aa18.62■□□□□ 0.57
HMGB3P22-201ENST00000442010 SLC35B2Q8TB61 432 aa18.62■□□□□ 0.57
HMGB3P22-201ENST00000442010 APOL2Q9BQE5 337 aa18.62■□□□□ 0.57
HMGB3P22-201ENST00000442010 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.62■□□□□ 0.57
HMGB3P22-201ENST00000442010 OSGEPL1Q9H4B0 414 aa18.62■□□□□ 0.57
HMGB3P22-201ENST00000442010 STN1Q9H668 368 aaKnown RBP18.62■□□□□ 0.57
HMGB3P22-201ENST00000442010 UCK1Q9HA47 277 aa18.62■□□□□ 0.57
HMGB3P22-201ENST00000442010 ARNT2Q9HBZ2 717 aa18.62■□□□□ 0.57
HMGB3P22-201ENST00000442010 WASH6PQ9NQA3 447 aa18.62■□□□□ 0.57
HMGB3P22-201ENST00000442010 DNAJC16Q9Y2G8 782 aa18.62■□□□□ 0.57
HMGB3P22-201ENST00000442010 KCTD3Q9Y597 815 aa18.62■□□□□ 0.57
HMGB3P22-201ENST00000442010 TCRBV7S2A1N4TA0A589 114 aa18.61■□□□□ 0.57
HMGB3P22-201ENST00000442010 LILRA5A6NI73 299 aa18.61■□□□□ 0.57
HMGB3P22-201ENST00000442010 K7ENP7 123 aa18.61■□□□□ 0.57
HMGB3P22-201ENST00000442010 STX7O15400 261 aaKnown RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms