RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 CCDC173Q0VFZ6 552 aa13.54□□□□□ -0.24
LTBR-202ENST00000440421 SEPT7Q16181 437 aaKnown RBP13.54□□□□□ -0.24
LTBR-202ENST00000440421 COL28A1Q2UY09 1125 aa13.54□□□□□ -0.24
LTBR-202ENST00000440421 RAB11FIP2Q7L804 512 aa13.54□□□□□ -0.24
LTBR-202ENST00000440421 PIM3Q86V86 326 aa13.54□□□□□ -0.24
LTBR-202ENST00000440421 FBXO39Q8N4B4 442 aa13.54□□□□□ -0.24
LTBR-202ENST00000440421 RASGEF1AQ8N9B8 481 aa13.54□□□□□ -0.24
LTBR-202ENST00000440421 DDHD1Q8NEL9 900 aa13.54□□□□□ -0.24
LTBR-202ENST00000440421 SNIP1Q8TAD8 396 aaKnown RBP13.54□□□□□ -0.24
LTBR-202ENST00000440421 DTX3LQ8TDB6 740 aa13.54□□□□□ -0.24
LTBR-202ENST00000440421 RTP4Q96DX8 246 aa13.54□□□□□ -0.24
LTBR-202ENST00000440421 LIN37Q96GY3 246 aaPredicted RBP13.54□□□□□ -0.24
LTBR-202ENST00000440421 PRR11Q96HE9 360 aaPredicted RBP13.54□□□□□ -0.24
LTBR-202ENST00000440421 ZNF578Q96N58 590 aaPredicted RBP13.54□□□□□ -0.24
LTBR-202ENST00000440421 SLC38A3Q99624 504 aa13.54□□□□□ -0.24
LTBR-202ENST00000440421 TLR10Q9BXR5 811 aa13.54□□□□□ -0.24
LTBR-202ENST00000440421 FRMD8P1Q9BZ68 369 aaPredicted RBP13.54□□□□□ -0.24
LTBR-202ENST00000440421 ZMYND15Q9H091 742 aa13.54□□□□□ -0.24
LTBR-202ENST00000440421 STN1Q9H668 368 aaKnown RBP13.54□□□□□ -0.24
LTBR-202ENST00000440421 ASB8Q9H765 288 aa13.54□□□□□ -0.24
LTBR-202ENST00000440421 ARNT2Q9HBZ2 717 aa13.54□□□□□ -0.24
LTBR-202ENST00000440421 ASCL3Q9NQ33 180 aa13.54□□□□□ -0.24
LTBR-202ENST00000440421 SCHIP1Q9P0W5 487 aaPredicted RBP13.54□□□□□ -0.24
LTBR-202ENST00000440421 FEZ2Q9UHY8 353 aaPredicted RBP13.54□□□□□ -0.24
LTBR-202ENST00000440421 PCDHGA8Q9Y5G5 932 aa13.54□□□□□ -0.24
LTBR-202ENST00000440421 UNC13CQ8NB66 2214 aa13.54□□□□□ -0.24
LTBR-202ENST00000440421 ZNF106Q9H2Y7 1883 aaKnown RBP13.53□□□□□ -0.24
LTBR-202ENST00000440421 A0A087WV48 116 aa13.53□□□□□ -0.24
LTBR-202ENST00000440421 IGHV1OR21-1A0A087WYE8 117 aa13.53□□□□□ -0.24
LTBR-202ENST00000440421 CCDC78A2IDD5 438 aa13.53□□□□□ -0.24
LTBR-202ENST00000440421 OR2AG2A6NM03 316 aa13.53□□□□□ -0.24
LTBR-202ENST00000440421 PDZK1P1A8MUH7 402 aa13.53□□□□□ -0.24
LTBR-202ENST00000440421 PLD2O14939 933 aa13.53□□□□□ -0.24
LTBR-202ENST00000440421 RRP8O43159 456 aaKnown RBP13.53□□□□□ -0.24
LTBR-202ENST00000440421 PSMD3O43242 534 aa13.53□□□□□ -0.24
LTBR-202ENST00000440421 CEP104O60308 925 aa13.53□□□□□ -0.24
LTBR-202ENST00000440421 SRP72O76094 671 aaKnown RBP13.53□□□□□ -0.24
LTBR-202ENST00000440421 AP2A1O95782 977 aa13.53□□□□□ -0.24
LTBR-202ENST00000440421 HOXB3P14651 431 aaPredicted RBP13.53□□□□□ -0.24
LTBR-202ENST00000440421 SLC2A4P14672 509 aa13.53□□□□□ -0.24
LTBR-202ENST00000440421 MSH3P20585 1137 aa13.53□□□□□ -0.24
LTBR-202ENST00000440421 MPSTP25325 297 aa13.53□□□□□ -0.24
LTBR-202ENST00000440421 ITPKBP27987 946 aa13.53□□□□□ -0.24
LTBR-202ENST00000440421 CXCR5P32302 372 aa13.53□□□□□ -0.24
LTBR-202ENST00000440421 MAPK9P45984 424 aa13.53□□□□□ -0.24
LTBR-202ENST00000440421 CLCNKAP51800 687 aa13.53□□□□□ -0.24
LTBR-202ENST00000440421 ZNF140P52738 457 aaPredicted RBP13.53□□□□□ -0.24
LTBR-202ENST00000440421 CTSCP53634 463 aa13.53□□□□□ -0.24
LTBR-202ENST00000440421 PDE1BQ01064 536 aa13.53□□□□□ -0.24
LTBR-202ENST00000440421 ZFP36L1Q07352 338 aaKnown RBP13.53□□□□□ -0.24
LTBR-202ENST00000440421 SEPT6Q14141 434 aa13.53□□□□□ -0.24
LTBR-202ENST00000440421 POU6F1Q14863 301 aa13.53□□□□□ -0.24
LTBR-202ENST00000440421 SIX1Q15475 284 aaPredicted RBP13.53□□□□□ -0.24
LTBR-202ENST00000440421 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.53□□□□□ -0.24
LTBR-202ENST00000440421 TMEM220Q6QAJ8 160 aa13.53□□□□□ -0.24
LTBR-202ENST00000440421 LRRC69Q6ZNQ3 347 aa13.53□□□□□ -0.24
LTBR-202ENST00000440421 MICALCLQ6ZW33 695 aa13.53□□□□□ -0.24
LTBR-202ENST00000440421 DET1Q7L5Y6 550 aa13.53□□□□□ -0.24
LTBR-202ENST00000440421 SLC9B2Q86UD5 537 aa13.53□□□□□ -0.24
LTBR-202ENST00000440421 SLITRK4Q8IW52 837 aa13.53□□□□□ -0.24
LTBR-202ENST00000440421 NAT14Q8WUY8 206 aa13.53□□□□□ -0.24
LTBR-202ENST00000440421 AHCYL2Q96HN2 611 aaKnown RBP13.53□□□□□ -0.24
LTBR-202ENST00000440421 SLC46A1Q96NT5 459 aa13.53□□□□□ -0.24
LTBR-202ENST00000440421 TIMM29Q9BSF4 260 aa13.53□□□□□ -0.24
LTBR-202ENST00000440421 ZCCHC2Q9C0B9 1178 aaKnown RBP13.53□□□□□ -0.24
LTBR-202ENST00000440421 FAM96AQ9H5X1 160 aa13.53□□□□□ -0.24
LTBR-202ENST00000440421 ETNK1Q9HBU6 452 aa13.53□□□□□ -0.24
LTBR-202ENST00000440421 THSD1Q9NS62 852 aa13.53□□□□□ -0.24
LTBR-202ENST00000440421 SMOXQ9NWM0 555 aa13.53□□□□□ -0.24
LTBR-202ENST00000440421 LHX6Q9UPM6 363 aa13.53□□□□□ -0.24
LTBR-202ENST00000440421 LOXL2Q9Y4K0 774 aa13.53□□□□□ -0.24
LTBR-202ENST00000440421 ACACAQ13085 2346 aa13.53□□□□□ -0.24
LTBR-202ENST00000440421 WDFY3Q8IZQ1 3526 aa13.52□□□□□ -0.24
LTBR-202ENST00000440421 KIR2DS5A0A0G2JLQ3 304 aa13.52□□□□□ -0.25
LTBR-202ENST00000440421 A0A0G2JNG1 304 aa13.52□□□□□ -0.25
LTBR-202ENST00000440421 OR5K4A6NMS3 321 aa13.52□□□□□ -0.25
LTBR-202ENST00000440421 E7EVH7 732 aa13.52□□□□□ -0.25
LTBR-202ENST00000440421 KIR2DS3K7RE56 304 aa13.52□□□□□ -0.25
LTBR-202ENST00000440421 LDB2O43679 373 aa13.52□□□□□ -0.25
LTBR-202ENST00000440421 FGGP02679 453 aa13.52□□□□□ -0.25
LTBR-202ENST00000440421 JMJD7P0C870 316 aa13.52□□□□□ -0.25
LTBR-202ENST00000440421 VCLP18206 1134 aa13.52□□□□□ -0.25
LTBR-202ENST00000440421 IDSP22304 550 aa13.52□□□□□ -0.25
LTBR-202ENST00000440421 RPL10P27635 214 aaKnown RBP13.52□□□□□ -0.25
LTBR-202ENST00000440421 PBLDP30039 288 aaPredicted RBP13.52□□□□□ -0.25
LTBR-202ENST00000440421 CSF2RBP32927 897 aa13.52□□□□□ -0.25
LTBR-202ENST00000440421 LMAN1P49257 510 aa13.52□□□□□ -0.25
LTBR-202ENST00000440421 DRG2P55039 364 aaKnown RBP13.52□□□□□ -0.25
LTBR-202ENST00000440421 PCBP4P57723 403 aaKnown RBP13.52□□□□□ -0.25
LTBR-202ENST00000440421 ERVPABLB-1P60509 514 aa13.52□□□□□ -0.25
LTBR-202ENST00000440421 XIAPP98170 497 aa13.52□□□□□ -0.25
LTBR-202ENST00000440421 EIF3IQ13347 325 aaKnown RBP13.52□□□□□ -0.25
LTBR-202ENST00000440421 KIR2DS5Q14953 304 aa13.52□□□□□ -0.25
LTBR-202ENST00000440421 CCNG2Q16589 344 aa13.52□□□□□ -0.25
LTBR-202ENST00000440421 FNBP1LQ5T0N5 605 aa13.52□□□□□ -0.25
LTBR-202ENST00000440421 ZNF574Q6ZN55 896 aaPredicted RBP13.52□□□□□ -0.25
LTBR-202ENST00000440421 C11orf96Q7Z7L8 435 aa13.52□□□□□ -0.25
LTBR-202ENST00000440421 TRIM48Q8IWZ4 208 aa13.52□□□□□ -0.25
LTBR-202ENST00000440421 CCDC89Q8N998 374 aa13.52□□□□□ -0.25
LTBR-202ENST00000440421 GLIS1Q8NBF1 620 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms