RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 XRCC1P18887 633 aaPredicted RBP16.04■□□□□ 0.16
SNRPD3-204ENST00000439775 CHRNA4P43681 627 aa16.04■□□□□ 0.16
SNRPD3-204ENST00000439775 NOMO1Q15155 1222 aa16.04■□□□□ 0.16
SNRPD3-204ENST00000439775 ATP13A5Q4VNC0 1218 aa16.04■□□□□ 0.16
SNRPD3-204ENST00000439775 KHDC1Q4VXA5 237 aaKnown RBP16.04■□□□□ 0.16
SNRPD3-204ENST00000439775 PID1Q7Z2X4 250 aa16.04■□□□□ 0.16
SNRPD3-204ENST00000439775 ARHGAP22Q7Z5H3 698 aa16.04■□□□□ 0.16
SNRPD3-204ENST00000439775 FAM129CQ86XR2 697 aa16.04■□□□□ 0.16
SNRPD3-204ENST00000439775 ZNF547Q8IVP9 402 aa16.04■□□□□ 0.16
SNRPD3-204ENST00000439775 GBA3Q9H227 469 aa16.04■□□□□ 0.16
SNRPD3-204ENST00000439775 BPIFA1Q9NP55 256 aa16.04■□□□□ 0.16
SNRPD3-204ENST00000439775 IL17CQ9P0M4 197 aa16.04■□□□□ 0.16
SNRPD3-204ENST00000439775 SLC23A2Q9UGH3 650 aa16.04■□□□□ 0.16
SNRPD3-204ENST00000439775 EFR3BQ9Y2G0 817 aa16.04■□□□□ 0.16
SNRPD3-204ENST00000439775 B3GALT1Q9Y5Z6 326 aa16.04■□□□□ 0.16
SNRPD3-204ENST00000439775 RCCD1A6NED2 376 aa16.03■□□□□ 0.16
SNRPD3-204ENST00000439775 SOWAHDA6NJG2 315 aa16.03■□□□□ 0.16
SNRPD3-204ENST00000439775 EFCAB7A8K855 629 aa16.03■□□□□ 0.16
SNRPD3-204ENST00000439775 BTNL10A8MVZ5 291 aa16.03■□□□□ 0.16
SNRPD3-204ENST00000439775 PPFIA2O75334 1257 aa16.03■□□□□ 0.16
SNRPD3-204ENST00000439775 MTX2O75431 263 aa16.03■□□□□ 0.16
SNRPD3-204ENST00000439775 IPO7O95373 1038 aaKnown RBP16.03■□□□□ 0.16
SNRPD3-204ENST00000439775 PTPN7P35236 360 aa16.03■□□□□ 0.16
SNRPD3-204ENST00000439775 SPAM1P38567 509 aa16.03■□□□□ 0.16
SNRPD3-204ENST00000439775 PPM1FP49593 454 aaPredicted RBP16.03■□□□□ 0.16
SNRPD3-204ENST00000439775 ATP1A2P50993 1020 aa16.03■□□□□ 0.16
SNRPD3-204ENST00000439775 ZNF75DP51815 510 aa16.03■□□□□ 0.16
SNRPD3-204ENST00000439775 LY6DQ14210 128 aa16.03■□□□□ 0.16
SNRPD3-204ENST00000439775 PLA2G4EQ3MJ16 856 aa16.03■□□□□ 0.16
SNRPD3-204ENST00000439775 AGAP9Q5VTM2 703 aa16.03■□□□□ 0.16
SNRPD3-204ENST00000439775 WASH2PQ6VEQ5 465 aa16.03■□□□□ 0.16
SNRPD3-204ENST00000439775 GLT6D1Q7Z4J2 308 aa16.03■□□□□ 0.16
SNRPD3-204ENST00000439775 VASH2Q86V25 355 aa16.03■□□□□ 0.16
SNRPD3-204ENST00000439775 TMTC1Q8IUR5 882 aa16.03■□□□□ 0.16
SNRPD3-204ENST00000439775 ZSCAN1Q8NBB4 408 aa16.03■□□□□ 0.16
SNRPD3-204ENST00000439775 IPMKQ8NFU5 416 aa16.03■□□□□ 0.16
SNRPD3-204ENST00000439775 BRSK1Q8TDC3 778 aa16.03■□□□□ 0.16
SNRPD3-204ENST00000439775 NCSTNQ92542 709 aa16.03■□□□□ 0.16
SNRPD3-204ENST00000439775 MED8Q96G25 268 aa16.03■□□□□ 0.16
SNRPD3-204ENST00000439775 TEFMQ96QE5 360 aaKnown RBP16.03■□□□□ 0.16
SNRPD3-204ENST00000439775 HEMGNQ9BXL5 484 aa16.03■□□□□ 0.16
SNRPD3-204ENST00000439775 FSD1LQ9BXM9 530 aa16.03■□□□□ 0.16
SNRPD3-204ENST00000439775 ZCCHC2Q9C0B9 1178 aaKnown RBP16.03■□□□□ 0.16
SNRPD3-204ENST00000439775 SEMA4CQ9C0C4 833 aa16.03■□□□□ 0.16
SNRPD3-204ENST00000439775 IL26Q9NPH9 171 aa16.03■□□□□ 0.16
SNRPD3-204ENST00000439775 WASH6PQ9NQA3 447 aa16.03■□□□□ 0.16
SNRPD3-204ENST00000439775 POT1Q9NUX5 634 aa16.03■□□□□ 0.16
SNRPD3-204ENST00000439775 OCIAD1Q9NX40 245 aa16.03■□□□□ 0.16
SNRPD3-204ENST00000439775 SLC39A1Q9NY26 324 aa16.03■□□□□ 0.16
SNRPD3-204ENST00000439775 SCHIP1Q9P0W5 487 aaPredicted RBP16.03■□□□□ 0.16
SNRPD3-204ENST00000439775 RSPH14Q9UHP6 348 aa16.03■□□□□ 0.16
SNRPD3-204ENST00000439775 PCDHA3Q9Y5H8 950 aa16.03■□□□□ 0.16
SNRPD3-204ENST00000439775 EPN1Q9Y6I3 576 aaPredicted RBP16.03■□□□□ 0.16
SNRPD3-204ENST00000439775 PDZK1P1A8MUH7 402 aa16.02■□□□□ 0.16
SNRPD3-204ENST00000439775 PJA2O43164 708 aa16.02■□□□□ 0.16
SNRPD3-204ENST00000439775 ANKRD34CP0C6C1 535 aa16.02■□□□□ 0.16
SNRPD3-204ENST00000439775 VCLP18206 1134 aa16.02■□□□□ 0.16
SNRPD3-204ENST00000439775 UGT1A3P35503 534 aa16.02■□□□□ 0.16
SNRPD3-204ENST00000439775 TMEM115Q12893 351 aaPredicted RBP16.02■□□□□ 0.16
SNRPD3-204ENST00000439775 GTF2H3Q13889 308 aa16.02■□□□□ 0.16
SNRPD3-204ENST00000439775 DCAF12Q5T6F0 453 aa16.02■□□□□ 0.16
SNRPD3-204ENST00000439775 ABRAXAS1Q6UWZ7 409 aa16.02■□□□□ 0.16
SNRPD3-204ENST00000439775 XKR5Q6UX68 686 aa16.02■□□□□ 0.16
SNRPD3-204ENST00000439775 TMEM26Q6ZUK4 368 aa16.02■□□□□ 0.16
SNRPD3-204ENST00000439775 C11orf96Q7Z7L8 435 aa16.02■□□□□ 0.16
SNRPD3-204ENST00000439775 PLXDC1Q8IUK5 500 aa16.02■□□□□ 0.16
SNRPD3-204ENST00000439775 TRAPPC5Q8IUR0 188 aa16.02■□□□□ 0.16
SNRPD3-204ENST00000439775 RBM12BQ8IXT5 1001 aaKnown RBP16.02■□□□□ 0.16
SNRPD3-204ENST00000439775 SLC25A41Q8N5S1 370 aa16.02■□□□□ 0.16
SNRPD3-204ENST00000439775 DDHD1Q8NEL9 900 aa16.02■□□□□ 0.16
SNRPD3-204ENST00000439775 BLOC1S5Q8TDH9 187 aa16.02■□□□□ 0.16
SNRPD3-204ENST00000439775 NKD1Q969G9 470 aa16.02■□□□□ 0.16
SNRPD3-204ENST00000439775 FERMT1Q9BQL6 677 aa16.02■□□□□ 0.16
SNRPD3-204ENST00000439775 TBC1D10AQ9BXI6 508 aa16.02■□□□□ 0.16
SNRPD3-204ENST00000439775 SMOXQ9NWM0 555 aa16.02■□□□□ 0.16
SNRPD3-204ENST00000439775 DNAJC16Q9Y2G8 782 aa16.02■□□□□ 0.16
SNRPD3-204ENST00000439775 PKP3Q9Y446 797 aa16.02■□□□□ 0.16
SNRPD3-204ENST00000439775 ZNF462Q96JM2 2506 aa16.02■□□□□ 0.15
SNRPD3-204ENST00000439775 HELZ2Q9BYK8 2649 aaKnown RBP16.01■□□□□ 0.15
SNRPD3-204ENST00000439775 GLYATL1P3A0A0U1RQE8 302 aa16.01■□□□□ 0.15
SNRPD3-204ENST00000439775 CCDC66A2RUB6 948 aa16.01■□□□□ 0.15
SNRPD3-204ENST00000439775 F5H423 210 aaPredicted RBP16.01■□□□□ 0.15
SNRPD3-204ENST00000439775 H7C0C1 242 aa16.01■□□□□ 0.15
SNRPD3-204ENST00000439775 KCNJ13O60928 360 aa16.01■□□□□ 0.15
SNRPD3-204ENST00000439775 ANXA9O76027 345 aa16.01■□□□□ 0.15
SNRPD3-204ENST00000439775 VIPP01282 170 aa16.01■□□□□ 0.15
SNRPD3-204ENST00000439775 PLA2G2AP14555 144 aa16.01■□□□□ 0.15
SNRPD3-204ENST00000439775 BRAFP15056 766 aa16.01■□□□□ 0.15
SNRPD3-204ENST00000439775 WT1P19544 449 aaPredicted RBP16.01■□□□□ 0.15
SNRPD3-204ENST00000439775 CTNNA2P26232 953 aa16.01■□□□□ 0.15
SNRPD3-204ENST00000439775 RBL1P28749 1068 aa16.01■□□□□ 0.15
SNRPD3-204ENST00000439775 SLC19A1P41440 591 aa16.01■□□□□ 0.15
SNRPD3-204ENST00000439775 MAPK9P45984 424 aa16.01■□□□□ 0.15
SNRPD3-204ENST00000439775 ATP5OP48047 213 aa16.01■□□□□ 0.15
SNRPD3-204ENST00000439775 GEMP55040 296 aa16.01■□□□□ 0.15
SNRPD3-204ENST00000439775 MC2RQ01718 297 aa16.01■□□□□ 0.15
SNRPD3-204ENST00000439775 DMPKQ09013 629 aa16.01■□□□□ 0.15
SNRPD3-204ENST00000439775 ITGA9Q13797 1035 aa16.01■□□□□ 0.15
SNRPD3-204ENST00000439775 SNAP47Q5SQN1 464 aa16.01■□□□□ 0.15
SNRPD3-204ENST00000439775 LDLRAP1Q5SW96 308 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms