RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 KIF2AO00139 706 aaPredicted RBP11.65□□□□□ -0.54
HSPG2-206ENST00000439717 CCL22O00626 93 aa11.65□□□□□ -0.54
HSPG2-206ENST00000439717 DNALI1O14645 258 aaPredicted RBP11.65□□□□□ -0.54
HSPG2-206ENST00000439717 TMEM63AO94886 807 aa11.65□□□□□ -0.54
HSPG2-206ENST00000439717 MYF5P13349 255 aa11.65□□□□□ -0.54
HSPG2-206ENST00000439717 ACP5P13686 325 aa11.65□□□□□ -0.54
HSPG2-206ENST00000439717 SLC2A4P14672 509 aa11.65□□□□□ -0.54
HSPG2-206ENST00000439717 GLB1P16278 677 aa11.65□□□□□ -0.54
HSPG2-206ENST00000439717 ZNF7P17097 686 aaPredicted RBP11.65□□□□□ -0.54
HSPG2-206ENST00000439717 ACRV1P26436 265 aa11.65□□□□□ -0.54
HSPG2-206ENST00000439717 MGAT1P26572 445 aa11.65□□□□□ -0.54
HSPG2-206ENST00000439717 ARSDP51689 593 aa11.65□□□□□ -0.54
HSPG2-206ENST00000439717 TERF1P54274 439 aa11.65□□□□□ -0.54
HSPG2-206ENST00000439717 HLTFQ14527 1009 aaKnown RBP eCLIP11.65□□□□□ -0.54
HSPG2-206ENST00000439717 KCTD19Q17RG1 926 aaPredicted RBP11.65□□□□□ -0.54
HSPG2-206ENST00000439717 INSCQ1MX18 579 aa11.65□□□□□ -0.54
HSPG2-206ENST00000439717 CCDC157Q569K6 752 aa11.65□□□□□ -0.54
HSPG2-206ENST00000439717 RNASEH2BQ5TBB1 312 aaKnown RBP11.65□□□□□ -0.54
HSPG2-206ENST00000439717 LYPLAL1Q5VWZ2 237 aa11.65□□□□□ -0.54
HSPG2-206ENST00000439717 ANKRD22Q5VYY1 191 aa11.65□□□□□ -0.54
HSPG2-206ENST00000439717 AFTPHQ6ULP2 937 aa11.65□□□□□ -0.54
HSPG2-206ENST00000439717 CRTC3Q6UUV7 619 aa11.65□□□□□ -0.54
HSPG2-206ENST00000439717 DHRS13Q6UX07 377 aa11.65□□□□□ -0.54
HSPG2-206ENST00000439717 TMPRSS7Q7RTY8 843 aa11.65□□□□□ -0.54
HSPG2-206ENST00000439717 CAND1Q86VP6 1230 aaKnown RBP11.65□□□□□ -0.54
HSPG2-206ENST00000439717 HOOK3Q86VS8 718 aa11.65□□□□□ -0.54
HSPG2-206ENST00000439717 SERPINA9Q86WD7 417 aa11.65□□□□□ -0.54
HSPG2-206ENST00000439717 TMPRSS12Q86WS5 348 aa11.65□□□□□ -0.54
HSPG2-206ENST00000439717 TRAPPC5Q8IUR0 188 aa11.65□□□□□ -0.54
HSPG2-206ENST00000439717 ZNF547Q8IVP9 402 aa11.65□□□□□ -0.54
HSPG2-206ENST00000439717 CACTIN-AS1Q8N1I8 211 aa11.65□□□□□ -0.54
HSPG2-206ENST00000439717 CHCHD4Q8N4Q1 142 aa11.65□□□□□ -0.54
HSPG2-206ENST00000439717 SPATA4Q8NEY3 305 aa11.65□□□□□ -0.54
HSPG2-206ENST00000439717 WDR48Q8TAF3 677 aa11.65□□□□□ -0.54
HSPG2-206ENST00000439717 HDAC10Q969S8 669 aa11.65□□□□□ -0.54
HSPG2-206ENST00000439717 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.65□□□□□ -0.542e-6■■■■■ 54.9
HSPG2-206ENST00000439717 C16orf45Q96MC5 204 aaPredicted RBP11.65□□□□□ -0.54
HSPG2-206ENST00000439717 TTC1Q99614 292 aa11.65□□□□□ -0.54
HSPG2-206ENST00000439717 KIFC1Q9BW19 673 aa11.65□□□□□ -0.54
HSPG2-206ENST00000439717 FAM96AQ9H5X1 160 aa11.65□□□□□ -0.54
HSPG2-206ENST00000439717 CHRAC1Q9NRG0 131 aa11.65□□□□□ -0.54
HSPG2-206ENST00000439717 KLC4Q9NSK0 619 aa11.65□□□□□ -0.54
HSPG2-206ENST00000439717 ANGPTL2Q9UKU9 493 aa11.65□□□□□ -0.54
HSPG2-206ENST00000439717 KCNK6Q9Y257 313 aa11.65□□□□□ -0.54
HSPG2-206ENST00000439717 NEUROG3Q9Y4Z2 214 aa11.65□□□□□ -0.54
HSPG2-206ENST00000439717 CNOT1A5YKK6 2376 aaKnown RBP11.65□□□□□ -0.54
HSPG2-206ENST00000439717 CCDC78A2IDD5 438 aa11.64□□□□□ -0.55
HSPG2-206ENST00000439717 PRR19A6NJB7 356 aa11.64□□□□□ -0.55
HSPG2-206ENST00000439717 SDR42E2A6NKP2 422 aa11.64□□□□□ -0.55
HSPG2-206ENST00000439717 OR5K4A6NMS3 321 aa11.64□□□□□ -0.55
HSPG2-206ENST00000439717 SMAPO00193 183 aa11.64□□□□□ -0.55
HSPG2-206ENST00000439717 NUDT21O43809 227 aaKnown RBP11.64□□□□□ -0.55
HSPG2-206ENST00000439717 HYAL3O43820 417 aaPredicted RBP11.64□□□□□ -0.55
HSPG2-206ENST00000439717 POP7O75817 140 aaKnown RBP11.64□□□□□ -0.55
HSPG2-206ENST00000439717 ATP1B2P14415 290 aaPredicted RBP11.64□□□□□ -0.55
HSPG2-206ENST00000439717 FOXN2P32314 431 aa11.64□□□□□ -0.55
HSPG2-206ENST00000439717 CTSCP53634 463 aa11.64□□□□□ -0.55
HSPG2-206ENST00000439717 PRAMEP78395 509 aa11.64□□□□□ -0.55
HSPG2-206ENST00000439717 DMPKQ09013 629 aa11.64□□□□□ -0.55
HSPG2-206ENST00000439717 ITIH4Q14624 930 aa11.64□□□□□ -0.55
HSPG2-206ENST00000439717 BCL7AQ4VC05 210 aa11.64□□□□□ -0.55
HSPG2-206ENST00000439717 TMEM220Q6QAJ8 160 aa11.64□□□□□ -0.55
HSPG2-206ENST00000439717 CERS6Q6ZMG9 384 aa11.64□□□□□ -0.55
HSPG2-206ENST00000439717 TAS2R42Q7RTR8 314 aa11.64□□□□□ -0.55
HSPG2-206ENST00000439717 ZNF572Q7Z3I7 529 aaPredicted RBP11.64□□□□□ -0.55
HSPG2-206ENST00000439717 C11orf96Q7Z7L8 435 aa11.64□□□□□ -0.55
HSPG2-206ENST00000439717 AMZ2Q86W34 360 aa11.64□□□□□ -0.55
HSPG2-206ENST00000439717 JAMLQ86YT9 394 aa11.64□□□□□ -0.55
HSPG2-206ENST00000439717 NAGSQ8N159 534 aa11.64□□□□□ -0.55
HSPG2-206ENST00000439717 ARL14Q8N4G2 192 aa11.64□□□□□ -0.55
HSPG2-206ENST00000439717 OR4L1Q8NH43 312 aa11.64□□□□□ -0.55
HSPG2-206ENST00000439717 MAPK15Q8TD08 544 aa11.64□□□□□ -0.55
HSPG2-206ENST00000439717 LINC00615Q96LM1 132 aaPredicted RBP11.64□□□□□ -0.55
HSPG2-206ENST00000439717 ZNF778Q96MU6 729 aa11.64□□□□□ -0.55
HSPG2-206ENST00000439717 SERPINB12Q96P63 405 aa11.64□□□□□ -0.55
HSPG2-206ENST00000439717 TREX1Q9NSU2 369 aa11.64□□□□□ -0.55
HSPG2-206ENST00000439717 SYBUQ9NX95 663 aa11.64□□□□□ -0.55
HSPG2-206ENST00000439717 TBC1D29Q9UFV1 150 aa11.64□□□□□ -0.55
HSPG2-206ENST00000439717 SLC23A2Q9UGH3 650 aa11.64□□□□□ -0.55
HSPG2-206ENST00000439717 SLC2A6Q9UGQ3 507 aa11.64□□□□□ -0.55
HSPG2-206ENST00000439717 SOX13Q9UN79 622 aa11.64□□□□□ -0.55
HSPG2-206ENST00000439717 MYLKQ15746 1914 aa11.64□□□□□ -0.55
HSPG2-206ENST00000439717 KIR2DS5A0A0G2JLQ3 304 aa11.63□□□□□ -0.55
HSPG2-206ENST00000439717 A0A0G2JNG1 304 aa11.63□□□□□ -0.55
HSPG2-206ENST00000439717 A6NCN8 305 aa11.63□□□□□ -0.55
HSPG2-206ENST00000439717 OR51F1A6NGY5 319 aa11.63□□□□□ -0.55
HSPG2-206ENST00000439717 OR2AG2A6NM03 316 aa11.63□□□□□ -0.55
HSPG2-206ENST00000439717 KIR2DS3K7RE56 304 aa11.63□□□□□ -0.55
HSPG2-206ENST00000439717 NDC80O14777 642 aa11.63□□□□□ -0.55
HSPG2-206ENST00000439717 ZW10O43264 779 aa11.63□□□□□ -0.55
HSPG2-206ENST00000439717 OPA1O60313 960 aa11.63□□□□□ -0.55
HSPG2-206ENST00000439717 AVILO75366 819 aa11.63□□□□□ -0.55
HSPG2-206ENST00000439717 AP2A2O94973 939 aa11.63□□□□□ -0.55
HSPG2-206ENST00000439717 GOT2P00505 430 aaKnown RBP11.63□□□□□ -0.55
HSPG2-206ENST00000439717 F3P13726 295 aa11.63□□□□□ -0.55
HSPG2-206ENST00000439717 IDSP22304 550 aa11.63□□□□□ -0.55
HSPG2-206ENST00000439717 IVDP26440 423 aa11.63□□□□□ -0.55
HSPG2-206ENST00000439717 PPARGP37231 505 aaPredicted RBP11.63□□□□□ -0.55
HSPG2-206ENST00000439717 NSG1P42857 185 aa11.63□□□□□ -0.55
HSPG2-206ENST00000439717 MAGEA3P43357 314 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms