RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 AKTIPQ9H8T0 292 aa8.5□□□□□ -1.05
HPS4-206ENST00000439453 MSRAQ9UJ68 235 aa8.5□□□□□ -1.05
HPS4-206ENST00000439453 ENPP5Q9UJA9 477 aa8.5□□□□□ -1.05
HPS4-206ENST00000439453 PCDHA9Q9Y5H5 950 aa8.5□□□□□ -1.05
HPS4-206ENST00000439453 NOX1Q9Y5S8 564 aa8.5□□□□□ -1.05
HPS4-206ENST00000439453 MYO9BQ13459 2157 aa8.5□□□□□ -1.05
HPS4-206ENST00000439453 TOR1BO14657 336 aa8.5□□□□□ -1.05
HPS4-206ENST00000439453 PTGESO14684 152 aa8.5□□□□□ -1.05
HPS4-206ENST00000439453 UMPSP11172 480 aa8.5□□□□□ -1.05
HPS4-206ENST00000439453 PTPN2P17706 415 aa8.5□□□□□ -1.05
HPS4-206ENST00000439453 ERCC2P18074 760 aa8.5□□□□□ -1.05
HPS4-206ENST00000439453 TSPAN8P19075 237 aa8.5□□□□□ -1.05
HPS4-206ENST00000439453 GSK3BP49841 420 aa8.5□□□□□ -1.05
HPS4-206ENST00000439453 GALNT1Q10472 559 aaPredicted RBP8.5□□□□□ -1.05
HPS4-206ENST00000439453 PAN2Q504Q3 1202 aaKnown RBP8.5□□□□□ -1.05
HPS4-206ENST00000439453 XKR4Q5GH76 650 aa8.5□□□□□ -1.05
HPS4-206ENST00000439453 OTUD1Q5VV17 481 aaPredicted RBP8.5□□□□□ -1.05
HPS4-206ENST00000439453 ARHGAP17Q68EM7 881 aa8.5□□□□□ -1.05
HPS4-206ENST00000439453 NAPEPLDQ6IQ20 393 aa8.5□□□□□ -1.05
HPS4-206ENST00000439453 THAP5Q7Z6K1 395 aa8.5□□□□□ -1.05
HPS4-206ENST00000439453 SLCO6A1Q86UG4 719 aa8.5□□□□□ -1.05
HPS4-206ENST00000439453 TMEM173Q86WV6 379 aaPredicted RBP8.5□□□□□ -1.05
HPS4-206ENST00000439453 SLC22A17Q8WUG5 538 aa8.5□□□□□ -1.05
HPS4-206ENST00000439453 YME1L1Q96TA2 773 aa8.5□□□□□ -1.05
HPS4-206ENST00000439453 CDX2Q99626 313 aaPredicted RBP8.5□□□□□ -1.05
HPS4-206ENST00000439453 MUC13Q9H3R2 512 aa8.5□□□□□ -1.05
HPS4-206ENST00000439453 DPEP3Q9H4B8 488 aa8.5□□□□□ -1.05
HPS4-206ENST00000439453 GSTO2Q9H4Y5 243 aa8.5□□□□□ -1.05
HPS4-206ENST00000439453 CERS4Q9HA82 394 aa8.5□□□□□ -1.05
HPS4-206ENST00000439453 TRHDEQ9UKU6 1024 aa8.5□□□□□ -1.05
HPS4-206ENST00000439453 PCDHB7Q9Y5E2 793 aa8.5□□□□□ -1.05
HPS4-206ENST00000439453 C16orf96A6NNT2 1141 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 TPD52L2O43399 206 aaKnown RBP8.49□□□□□ -1.05
HPS4-206ENST00000439453 XYLBO75191 536 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 IL7RP16871 459 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 SOX11P35716 441 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 SLC1A2P43004 574 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 TPD52P55327 224 aaPredicted RBP8.49□□□□□ -1.05
HPS4-206ENST00000439453 UGT3A2Q3SY77 523 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 SPATS1Q496A3 300 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 ZNF697Q5TEC3 545 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 MFSD4BQ5TF39 518 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 PLEKHG7Q6ZR37 379 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 MIER2Q8N344 545 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.49□□□□□ -1.05
HPS4-206ENST00000439453 TMEM125Q96AQ2 219 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 FAM149B1Q96BN6 582 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 VMP1Q96GC9 406 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 ZFP42Q96MM3 310 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 SEPHS2Q99611 448 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 BDH2Q9BUT1 245 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 VN1R3Q9BXE9 311 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 DGCR6LQ9BY27 220 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 HPS4Q9NQG7 708 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 PCDHGA11Q9Y5H2 935 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 NUP205Q92621 2012 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 A8MU76 341 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 FAM72CH0Y354 149 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 HCRTO43612 131 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 UGT2B11O75310 529 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 TCEA1P23193 301 aaKnown RBP8.49□□□□□ -1.05
HPS4-206ENST00000439453 IGFBP6P24592 240 aaPredicted RBP8.49□□□□□ -1.05
HPS4-206ENST00000439453 TKTP29401 623 aaKnown RBP8.49□□□□□ -1.05
HPS4-206ENST00000439453 TKTL1P51854 596 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 BCAT1P54687 386 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 POU4F1Q01851 419 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 PCID2Q5JVF3 399 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 FAM72AQ5TYM5 149 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 AGAP9Q5VTM2 703 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 FAM72DQ6L9T8 149 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 ESRP1Q6NXG1 681 aaKnown RBP8.49□□□□□ -1.05
HPS4-206ENST00000439453 FAM72BQ86X60 149 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 ZNF280BQ86YH2 543 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 OR6B3Q8NGW1 331 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 MUL1Q969V5 352 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 BTN2A3PQ96KV6 586 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 KCTD14Q9BQ13 255 aaPredicted RBP8.49□□□□□ -1.05
HPS4-206ENST00000439453 ALG2Q9H553 416 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 RMND5AQ9H871 391 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 SCUBE2Q9NQ36 999 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 TRPV5Q9NQA5 729 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 KLQ9UEF7 1012 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 GIMAP2Q9UG22 337 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 BAG5Q9UL15 447 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 V9GYQ6 96 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 C2orf16Q68DN1 1984 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 PRRC2BQ5JSZ5 2229 aaKnown RBP8.49□□□□□ -1.05
HPS4-206ENST00000439453 DENND4AQ7Z401 1863 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 ARL5CA6NH57 179 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 TBKBP1A7MCY6 615 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 AP3B1O00203 1094 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 MTSS1O43312 755 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 POU3F3P20264 500 aaPredicted RBP8.49□□□□□ -1.05
HPS4-206ENST00000439453 BDNFP23560 247 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 AKAP5P24588 427 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 ARNTP27540 789 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 ACADSBP45954 432 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 RPL34P49207 117 aaKnown RBP8.49□□□□□ -1.05
HPS4-206ENST00000439453 ARSFP54793 590 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 LIPEQ05469 1076 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms