RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 TIMM29Q9BSF4 260 aa18.19■□□□□ 0.5
AC004540.1-201ENST00000439120 TBC1D10AQ9BXI6 508 aa18.19■□□□□ 0.5
AC004540.1-201ENST00000439120 FSD1LQ9BXM9 530 aa18.19■□□□□ 0.5
AC004540.1-201ENST00000439120 HACD3Q9P035 362 aa18.19■□□□□ 0.5
AC004540.1-201ENST00000439120 PDP2Q9P2J9 529 aa18.19■□□□□ 0.5
AC004540.1-201ENST00000439120 RSPH14Q9UHP6 348 aa18.19■□□□□ 0.5
AC004540.1-201ENST00000439120 PCDHA13Q9Y5I0 950 aa18.19■□□□□ 0.5
AC004540.1-201ENST00000439120 hCG_1818297A0A087WSY0 165 aa18.18■□□□□ 0.5
AC004540.1-201ENST00000439120 HACD1B0YJ81 288 aa18.18■□□□□ 0.5
AC004540.1-201ENST00000439120 B8ZZF3 427 aa18.18■□□□□ 0.5
AC004540.1-201ENST00000439120 IPO7O95373 1038 aaKnown RBP18.18■□□□□ 0.5
AC004540.1-201ENST00000439120 UGT1A3P35503 534 aa18.18■□□□□ 0.5
AC004540.1-201ENST00000439120 HMGCLP35914 325 aa18.18■□□□□ 0.5
AC004540.1-201ENST00000439120 NOMO1Q15155 1222 aa18.18■□□□□ 0.5
AC004540.1-201ENST00000439120 ATP13A5Q4VNC0 1218 aa18.18■□□□□ 0.5
AC004540.1-201ENST00000439120 SIRPB2Q5JXA9 342 aa18.18■□□□□ 0.5
AC004540.1-201ENST00000439120 CEACAM20Q6UY09 585 aa18.18■□□□□ 0.5
AC004540.1-201ENST00000439120 ZNF567Q8N184 647 aa18.18■□□□□ 0.5
AC004540.1-201ENST00000439120 IPMKQ8NFU5 416 aa18.18■□□□□ 0.5
AC004540.1-201ENST00000439120 BLOC1S5Q8TDH9 187 aa18.18■□□□□ 0.5
AC004540.1-201ENST00000439120 NKD1Q969G9 470 aa18.18■□□□□ 0.5
AC004540.1-201ENST00000439120 QKIQ96PU8 341 aaKnown RBP eCLIP18.18■□□□□ 0.5
AC004540.1-201ENST00000439120 CTRCQ99895 268 aa18.18■□□□□ 0.5
AC004540.1-201ENST00000439120 ZCCHC2Q9C0B9 1178 aaKnown RBP18.18■□□□□ 0.5
AC004540.1-201ENST00000439120 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.18■□□□□ 0.5
AC004540.1-201ENST00000439120 SLC23A2Q9UGH3 650 aa18.18■□□□□ 0.5
AC004540.1-201ENST00000439120 TRHDEQ9UKU6 1024 aa18.18■□□□□ 0.5
AC004540.1-201ENST00000439120 PKP3Q9Y446 797 aa18.18■□□□□ 0.5
AC004540.1-201ENST00000439120 LOC285095A0A1B0GVY8 99 aa18.17■□□□□ 0.5
AC004540.1-201ENST00000439120 MACROD2A1Z1Q3 448 aa18.17■□□□□ 0.5
AC004540.1-201ENST00000439120 H7C0C1 242 aa18.17■□□□□ 0.5
AC004540.1-201ENST00000439120 J3QKU1 62 aa18.17■□□□□ 0.5
AC004540.1-201ENST00000439120 RAD1O60671 282 aa18.17■□□□□ 0.5
AC004540.1-201ENST00000439120 EPOP01588 193 aa18.17■□□□□ 0.5
AC004540.1-201ENST00000439120 AMD1P17707 334 aa18.17■□□□□ 0.5
AC004540.1-201ENST00000439120 XRCC1P18887 633 aaPredicted RBP18.17■□□□□ 0.5
AC004540.1-201ENST00000439120 HLA-DPA1P20036 260 aa18.17■□□□□ 0.5
AC004540.1-201ENST00000439120 IDSP22304 550 aa18.17■□□□□ 0.5
AC004540.1-201ENST00000439120 SPAM1P38567 509 aa18.17■□□□□ 0.5
AC004540.1-201ENST00000439120 ATP5OP48047 213 aa18.17■□□□□ 0.5
AC004540.1-201ENST00000439120 ARSDP51689 593 aa18.17■□□□□ 0.5
AC004540.1-201ENST00000439120 UBE2IP63279 158 aaKnown RBP18.17■□□□□ 0.5
AC004540.1-201ENST00000439120 CYP4F2P78329 520 aa18.17■□□□□ 0.5
AC004540.1-201ENST00000439120 MC2RQ01718 297 aa18.17■□□□□ 0.5
AC004540.1-201ENST00000439120 ADCY2Q08462 1091 aa18.17■□□□□ 0.5
AC004540.1-201ENST00000439120 MPP3Q13368 585 aa18.17■□□□□ 0.5
AC004540.1-201ENST00000439120 PPP2R5EQ16537 467 aa18.17■□□□□ 0.5
AC004540.1-201ENST00000439120 KDELC1Q6UW63 502 aa18.17■□□□□ 0.5
AC004540.1-201ENST00000439120 ARHGAP22Q7Z5H3 698 aa18.17■□□□□ 0.5
AC004540.1-201ENST00000439120 BRSK1Q8TDC3 778 aa18.17■□□□□ 0.5
AC004540.1-201ENST00000439120 CXorf40BQ96DE9 158 aa18.17■□□□□ 0.5
AC004540.1-201ENST00000439120 FCRL5Q96RD9 977 aa18.17■□□□□ 0.5
AC004540.1-201ENST00000439120 ZPBPQ9BS86 351 aa18.17■□□□□ 0.5
AC004540.1-201ENST00000439120 HEMGNQ9BXL5 484 aa18.17■□□□□ 0.5
AC004540.1-201ENST00000439120 UCK1Q9HA47 277 aa18.17■□□□□ 0.5
AC004540.1-201ENST00000439120 TFR2Q9UP52 801 aa18.17■□□□□ 0.5
AC004540.1-201ENST00000439120 HEMK1Q9Y5R4 338 aaPredicted RBP18.17■□□□□ 0.5
AC004540.1-201ENST00000439120 UBXN7O94888 489 aa18.16■□□□□ 0.5
AC004540.1-201ENST00000439120 LCA5LO95447 670 aa18.16■□□□□ 0.5
AC004540.1-201ENST00000439120 SFTPCP11686 197 aa18.16■□□□□ 0.5
AC004540.1-201ENST00000439120 TYRP1P17643 537 aa18.16■□□□□ 0.5
AC004540.1-201ENST00000439120 WT1P19544 449 aaPredicted RBP18.16■□□□□ 0.5
AC004540.1-201ENST00000439120 RPL10P27635 214 aaKnown RBP18.16■□□□□ 0.5
AC004540.1-201ENST00000439120 HALP42357 657 aa18.16■□□□□ 0.5
AC004540.1-201ENST00000439120 CHRNA4P43681 627 aa18.16■□□□□ 0.5
AC004540.1-201ENST00000439120 MARCKSL1P49006 195 aa18.16■□□□□ 0.5
AC004540.1-201ENST00000439120 NAP1L1P55209 391 aaKnown RBP18.16■□□□□ 0.5
AC004540.1-201ENST00000439120 TMEM115Q12893 351 aaPredicted RBP18.16■□□□□ 0.5
AC004540.1-201ENST00000439120 SLC1A5Q15758 541 aa18.16■□□□□ 0.5
AC004540.1-201ENST00000439120 LINC00303Q3SY05 128 aa18.16■□□□□ 0.5
AC004540.1-201ENST00000439120 FAM151BQ6UXP7 276 aa18.16■□□□□ 0.5
AC004540.1-201ENST00000439120 TMEM26Q6ZUK4 368 aa18.16■□□□□ 0.5
AC004540.1-201ENST00000439120 BMPERQ8N8U9 685 aa18.16■□□□□ 0.5
AC004540.1-201ENST00000439120 KIAA1143Q96AT1 154 aaPredicted RBP18.16■□□□□ 0.5
AC004540.1-201ENST00000439120 RTP4Q96DX8 246 aa18.16■□□□□ 0.5
AC004540.1-201ENST00000439120 MRGPRX2Q96LB1 330 aa18.16■□□□□ 0.5
AC004540.1-201ENST00000439120 FAM117AQ9C073 453 aa18.16■□□□□ 0.5
AC004540.1-201ENST00000439120 POT1Q9NUX5 634 aa18.16■□□□□ 0.5
AC004540.1-201ENST00000439120 SCHIP1Q9P0W5 487 aaPredicted RBP18.16■□□□□ 0.5
AC004540.1-201ENST00000439120 TRIM10Q9UDY6 481 aa18.16■□□□□ 0.5
AC004540.1-201ENST00000439120 GLYATL1P3A0A0U1RQE8 302 aa18.15■□□□□ 0.5
AC004540.1-201ENST00000439120 POLR1CO15160 346 aaPredicted RBP18.15■□□□□ 0.5
AC004540.1-201ENST00000439120 LIFP15018 202 aa18.15■□□□□ 0.5
AC004540.1-201ENST00000439120 CTNNA2P26232 953 aa18.15■□□□□ 0.5
AC004540.1-201ENST00000439120 SLC19A1P41440 591 aa18.15■□□□□ 0.5
AC004540.1-201ENST00000439120 DRG2P55039 364 aaKnown RBP18.15■□□□□ 0.5
AC004540.1-201ENST00000439120 NFATC3Q12968 1075 aa18.15■□□□□ 0.5
AC004540.1-201ENST00000439120 XRCC4Q13426 336 aa18.15■□□□□ 0.5
AC004540.1-201ENST00000439120 ITGA9Q13797 1035 aa18.15■□□□□ 0.5
AC004540.1-201ENST00000439120 TBR1Q16650 682 aa18.15■□□□□ 0.5
AC004540.1-201ENST00000439120 KHDC1Q4VXA5 237 aaKnown RBP18.15■□□□□ 0.5
AC004540.1-201ENST00000439120 LDLRAP1Q5SW96 308 aa18.15■□□□□ 0.5
AC004540.1-201ENST00000439120 ITPRIPL1Q6GPH6 555 aa18.15■□□□□ 0.5
AC004540.1-201ENST00000439120 BBS12Q6ZW61 710 aa18.15■□□□□ 0.5
AC004540.1-201ENST00000439120 ZNF547Q8IVP9 402 aa18.15■□□□□ 0.5
AC004540.1-201ENST00000439120 NLGN4XQ8N0W4 816 aa18.15■□□□□ 0.5
AC004540.1-201ENST00000439120 TTC30BQ8N4P2 665 aa18.15■□□□□ 0.5
AC004540.1-201ENST00000439120 EXD3Q8N9H8 876 aa18.15■□□□□ 0.5
AC004540.1-201ENST00000439120 NLGN4YQ8NFZ3 816 aaPredicted RBP18.15■□□□□ 0.5
AC004540.1-201ENST00000439120 KRT35Q92764 455 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms