RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 KDM4CQ9H3R0 1056 aa18.04■□□□□ 0.48
HMGN1-206ENST00000431390 GPAMQ9HCL2 828 aa18.04■□□□□ 0.48
HMGN1-206ENST00000431390 PREBQ9HCU5 417 aa18.04■□□□□ 0.48
HMGN1-206ENST00000431390 SPATA6Q9NWH7 488 aaPredicted RBP18.04■□□□□ 0.48
HMGN1-206ENST00000431390 DLL3Q9NYJ7 618 aa18.04■□□□□ 0.48
HMGN1-206ENST00000431390 SLC17A7Q9P2U7 560 aa18.04■□□□□ 0.48
HMGN1-206ENST00000431390 TMPRSS11EQ9UL52 423 aa18.04■□□□□ 0.48
HMGN1-206ENST00000431390 MTF2Q9Y483 593 aaPredicted RBP18.04■□□□□ 0.48
HMGN1-206ENST00000431390 TRPM6Q9BX84 2022 aa18.04■□□□□ 0.48
HMGN1-206ENST00000431390 FADS2P1A8MWK0 482 aa18.04■□□□□ 0.48
HMGN1-206ENST00000431390 VPS26AO75436 327 aa18.04■□□□□ 0.48
HMGN1-206ENST00000431390 RHOBTB1O94844 696 aa18.04■□□□□ 0.48
HMGN1-206ENST00000431390 PYGLP06737 847 aa18.04■□□□□ 0.48
HMGN1-206ENST00000431390 DHRS4L1P0CG22 281 aa18.04■□□□□ 0.48
HMGN1-206ENST00000431390 GABRG2P18507 467 aa18.04■□□□□ 0.48
HMGN1-206ENST00000431390 ADPRHP54922 357 aa18.04■□□□□ 0.48
HMGN1-206ENST00000431390 TIAL1Q01085 375 aaKnown RBP eCLIP18.04■□□□□ 0.48
HMGN1-206ENST00000431390 PPARDQ03181 441 aa18.04■□□□□ 0.48
HMGN1-206ENST00000431390 ZNF460Q14592 562 aa18.04■□□□□ 0.48
HMGN1-206ENST00000431390 LRRC14Q15048 493 aa18.04■□□□□ 0.48
HMGN1-206ENST00000431390 TSNAXIP1Q2TAA8 658 aa18.04■□□□□ 0.48
HMGN1-206ENST00000431390 GPRC6AQ5T6X5 926 aa18.04■□□□□ 0.48
HMGN1-206ENST00000431390 HHATQ5VTY9 493 aa18.04■□□□□ 0.48
HMGN1-206ENST00000431390 NEK5Q6P3R8 708 aa18.04■□□□□ 0.48
HMGN1-206ENST00000431390 LVRNQ6Q4G3 990 aa18.04■□□□□ 0.48
HMGN1-206ENST00000431390 MACC1Q6ZN28 852 aa18.04■□□□□ 0.48
HMGN1-206ENST00000431390 TBC1D1Q86TI0 1168 aaPredicted RBP18.04■□□□□ 0.48
HMGN1-206ENST00000431390 DDHD1Q8NEL9 900 aa18.04■□□□□ 0.48
HMGN1-206ENST00000431390 OR14C36Q8NHC7 312 aa18.04■□□□□ 0.48
HMGN1-206ENST00000431390 DYDC1Q8WWB3 177 aa18.04■□□□□ 0.48
HMGN1-206ENST00000431390 GLYATL1Q969I3 302 aa18.04■□□□□ 0.48
HMGN1-206ENST00000431390 FAM111AQ96PZ2 611 aa18.04■□□□□ 0.48
HMGN1-206ENST00000431390 BOCQ9BWV1 1114 aa18.04■□□□□ 0.48
HMGN1-206ENST00000431390 MED16Q9Y2X0 877 aa18.04■□□□□ 0.48
HMGN1-206ENST00000431390 CEP250Q9BV73 2442 aa18.03■□□□□ 0.48
HMGN1-206ENST00000431390 FAM170BA6NMN3 283 aa18.03■□□□□ 0.48
HMGN1-206ENST00000431390 SHOX2O60902 331 aaPredicted RBP18.03■□□□□ 0.48
HMGN1-206ENST00000431390 KLHL2O95198 593 aa18.03■□□□□ 0.48
HMGN1-206ENST00000431390 SKIV2L2P42285 1042 aaKnown RBP18.03■□□□□ 0.48
HMGN1-206ENST00000431390 RPS21P63220 83 aaKnown RBP18.03■□□□□ 0.48
HMGN1-206ENST00000431390 IRF9Q00978 393 aa18.03■□□□□ 0.48
HMGN1-206ENST00000431390 IL9RQ01113 521 aa18.03■□□□□ 0.48
HMGN1-206ENST00000431390 PDAP1Q13442 181 aaKnown RBP18.03■□□□□ 0.48
HMGN1-206ENST00000431390 CCDC153Q494R4 210 aa18.03■□□□□ 0.48
HMGN1-206ENST00000431390 LDLRAP1Q5SW96 308 aa18.03■□□□□ 0.48
HMGN1-206ENST00000431390 N4BP2L1Q5TBK1 243 aaPredicted RBP18.03■□□□□ 0.48
HMGN1-206ENST00000431390 PTRHD1Q6GMV3 140 aaKnown RBP18.03■□□□□ 0.48
HMGN1-206ENST00000431390 UGT3A1Q6NUS8 523 aa18.03■□□□□ 0.48
HMGN1-206ENST00000431390 KIAA1324Q6UXG2 1013 aaKnown RBP18.03■□□□□ 0.48
HMGN1-206ENST00000431390 CENPLQ8N0S6 344 aaPredicted RBP18.03■□□□□ 0.48
HMGN1-206ENST00000431390 PLD6Q8N2A8 252 aaKnown RBP18.03■□□□□ 0.48
HMGN1-206ENST00000431390 UBXN10Q96LJ8 280 aa18.03■□□□□ 0.48
HMGN1-206ENST00000431390 OSBPL6Q9BZF3 934 aa18.03■□□□□ 0.48
HMGN1-206ENST00000431390 SYTL2Q9HCH5 934 aa18.03■□□□□ 0.48
HMGN1-206ENST00000431390 OAS3Q9Y6K5 1087 aaKnown RBP18.03■□□□□ 0.48
HMGN1-206ENST00000431390 IGLON5A6NGN9 336 aa18.02■□□□□ 0.48
HMGN1-206ENST00000431390 CFAP99D6REC4 459 aa18.02■□□□□ 0.48
HMGN1-206ENST00000431390 E5RI56 91 aa18.02■□□□□ 0.48
HMGN1-206ENST00000431390 LAMTOR5O43504 91 aa18.02■□□□□ 0.48
HMGN1-206ENST00000431390 TOP3BO95985 862 aaKnown RBP18.02■□□□□ 0.48
HMGN1-206ENST00000431390 SOD1P00441 154 aa18.02■□□□□ 0.48
HMGN1-206ENST00000431390 RALBP11234 206 aa18.02■□□□□ 0.48
HMGN1-206ENST00000431390 KPNA2P52292 529 aaKnown RBP18.02■□□□□ 0.48
HMGN1-206ENST00000431390 PGGT1BP53609 377 aa18.02■□□□□ 0.48
HMGN1-206ENST00000431390 GNGT1P63211 74 aa18.02■□□□□ 0.48
HMGN1-206ENST00000431390 B4GALNT1Q00973 533 aa18.02■□□□□ 0.48
HMGN1-206ENST00000431390 RSPO4Q2I0M5 234 aaPredicted RBP18.02■□□□□ 0.48
HMGN1-206ENST00000431390 MAP7D1Q3KQU3 841 aa18.02■□□□□ 0.48
HMGN1-206ENST00000431390 PIM3Q86V86 326 aa18.02■□□□□ 0.48
HMGN1-206ENST00000431390 DCUN1D1Q96GG9 259 aa18.02■□□□□ 0.48
HMGN1-206ENST00000431390 C12orf65Q9H3J6 166 aaKnown RBP18.02■□□□□ 0.48
HMGN1-206ENST00000431390 CCDC134Q9H6E4 229 aa18.02■□□□□ 0.48
HMGN1-206ENST00000431390 MLXIPLQ9NP71 852 aa18.02■□□□□ 0.48
HMGN1-206ENST00000431390 TMEM216Q9P0N5 145 aa18.02■□□□□ 0.48
HMGN1-206ENST00000431390 PIKFYVEQ9Y2I7 2098 aa18.02■□□□□ 0.47
HMGN1-206ENST00000431390 PLIN3O60664 434 aa18.01■□□□□ 0.47
HMGN1-206ENST00000431390 NIPSNAP2O75323 286 aa18.01■□□□□ 0.47
HMGN1-206ENST00000431390 APOA4P06727 396 aa18.01■□□□□ 0.47
HMGN1-206ENST00000431390 LTA4HP09960 611 aaKnown RBP18.01■□□□□ 0.47
HMGN1-206ENST00000431390 ZNF37AP17032 561 aaPredicted RBP18.01■□□□□ 0.47
HMGN1-206ENST00000431390 CHRM3P20309 590 aa18.01■□□□□ 0.47
HMGN1-206ENST00000431390 GMPRP36959 345 aa18.01■□□□□ 0.47
HMGN1-206ENST00000431390 GPR1P46091 355 aa18.01■□□□□ 0.47
HMGN1-206ENST00000431390 GAS6Q14393 721 aa18.01■□□□□ 0.47
HMGN1-206ENST00000431390 FAM83EQ2M2I3 478 aa18.01■□□□□ 0.47
HMGN1-206ENST00000431390 TMEM259Q4ZIN3 620 aa18.01■□□□□ 0.47
HMGN1-206ENST00000431390 RAET1GQ6H3X3 334 aa18.01■□□□□ 0.47
HMGN1-206ENST00000431390 PHYKPLQ8IUZ5 450 aa18.01■□□□□ 0.47
HMGN1-206ENST00000431390 GDAP1Q8TB36 358 aa18.01■□□□□ 0.47
HMGN1-206ENST00000431390 KCTD4Q8WVF5 259 aa18.01■□□□□ 0.47
HMGN1-206ENST00000431390 CKAP2Q8WWK9 683 aa18.01■□□□□ 0.47
HMGN1-206ENST00000431390 CCDC97Q96F63 343 aaPredicted RBP18.01■□□□□ 0.47
HMGN1-206ENST00000431390 GPR21Q99679 349 aa18.01■□□□□ 0.47
HMGN1-206ENST00000431390 PAIP2Q9BPZ3 127 aaKnown RBP18.01■□□□□ 0.47
HMGN1-206ENST00000431390 C1QTNF2Q9BXJ5 285 aa18.01■□□□□ 0.47
HMGN1-206ENST00000431390 USP36Q9P275 1121 aaKnown RBP18.01■□□□□ 0.47
HMGN1-206ENST00000431390 NCDNQ9UBB6 729 aa18.01■□□□□ 0.47
HMGN1-206ENST00000431390 TRMT6Q9UJA5 497 aaKnown RBP18.01■□□□□ 0.47
HMGN1-206ENST00000431390 FBXO4Q9UKT5 387 aa18.01■□□□□ 0.47
HMGN1-206ENST00000431390 EMCNQ9ULC0 261 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms