RNA–Protein interactions for RNA: ENST00000430570.5

CPNE1-212, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-212ENST00000430570 DET1Q7L5Y6 550 aa24.81■■□□□ 1.56
CPNE1-212ENST00000430570 TMEM135Q86UB9 458 aa24.81■■□□□ 1.56
CPNE1-212ENST00000430570 GKN2Q86XP6 184 aa24.81■■□□□ 1.56
CPNE1-212ENST00000430570 IGDCC3Q8IVU1 814 aa24.81■■□□□ 1.56
CPNE1-212ENST00000430570 SGSM3Q96HU1 749 aa24.81■■□□□ 1.56
CPNE1-212ENST00000430570 TTC25Q96NG3 672 aa24.81■■□□□ 1.56
CPNE1-212ENST00000430570 BOCQ9BWV1 1114 aa24.81■■□□□ 1.56
CPNE1-212ENST00000430570 SLC23A2Q9UGH3 650 aa24.81■■□□□ 1.56
CPNE1-212ENST00000430570 DOLKQ9UPQ8 538 aa24.81■■□□□ 1.56
CPNE1-212ENST00000430570 DMXL1Q9Y485 3027 aa24.81■■□□□ 1.56
CPNE1-212ENST00000430570 PCNX2A6NKB5 2137 aa24.8■■□□□ 1.56
CPNE1-212ENST00000430570 GPR89AB7ZAQ6 455 aa24.8■■□□□ 1.56
CPNE1-212ENST00000430570 VAPBO95292 243 aa24.8■■□□□ 1.56
CPNE1-212ENST00000430570 GPR89BP0CG08 455 aa24.8■■□□□ 1.56
CPNE1-212ENST00000430570 ACP5P13686 325 aa24.8■■□□□ 1.56
CPNE1-212ENST00000430570 GTF2H3Q13889 308 aa24.8■■□□□ 1.56
CPNE1-212ENST00000430570 INAVAQ3KP66 663 aa24.8■■□□□ 1.56
CPNE1-212ENST00000430570 PLA2G4EQ3MJ16 856 aa24.8■■□□□ 1.56
CPNE1-212ENST00000430570 HP1BP3Q5SSJ5 553 aaPredicted RBP24.8■■□□□ 1.56
CPNE1-212ENST00000430570 ARMC3Q5W041 872 aa24.8■■□□□ 1.56
CPNE1-212ENST00000430570 TMEM220Q6QAJ8 160 aa24.8■■□□□ 1.56
CPNE1-212ENST00000430570 LDB1Q86U70 411 aaPredicted RBP24.8■■□□□ 1.56
CPNE1-212ENST00000430570 SFTPA2Q8IWL1 248 aa24.8■■□□□ 1.56
CPNE1-212ENST00000430570 ZNF669Q96BR6 464 aaPredicted RBP24.8■■□□□ 1.56
CPNE1-212ENST00000430570 SGF29Q96ES7 293 aa24.8■■□□□ 1.56
CPNE1-212ENST00000430570 STAMBPL1Q96FJ0 436 aa24.8■■□□□ 1.56
CPNE1-212ENST00000430570 COPS8Q99627 209 aa24.8■■□□□ 1.56
CPNE1-212ENST00000430570 WDR83Q9BRX9 315 aaKnown RBP24.8■■□□□ 1.56
CPNE1-212ENST00000430570 SLC32A1Q9H598 525 aa24.8■■□□□ 1.56
CPNE1-212ENST00000430570 IL1RAPL1Q9NZN1 696 aa24.8■■□□□ 1.56
CPNE1-212ENST00000430570 MARCH4Q9P2E8 410 aaPredicted RBP24.8■■□□□ 1.56
CPNE1-212ENST00000430570 RPS6KL1Q9Y6S9 549 aa24.8■■□□□ 1.56
CPNE1-212ENST00000430570 IGLV3-16A0A075B6K0 115 aa24.79■■□□□ 1.56
CPNE1-212ENST00000430570 ZCWPW2A0A1B0GU75 182 aa24.79■■□□□ 1.56
CPNE1-212ENST00000430570 OR2AG2A6NM03 316 aa24.79■■□□□ 1.56
CPNE1-212ENST00000430570 GOLGA8KD6RF30 607 aa24.79■■□□□ 1.56
CPNE1-212ENST00000430570 GOLGA8TH3BQL2 631 aa24.79■■□□□ 1.56
CPNE1-212ENST00000430570 SGTAO43765 313 aa24.79■■□□□ 1.56
CPNE1-212ENST00000430570 KCNK5O95279 499 aa24.79■■□□□ 1.56
CPNE1-212ENST00000430570 LDOC1O95751 146 aaPredicted RBP24.79■■□□□ 1.56
CPNE1-212ENST00000430570 ID4P47928 161 aa24.79■■□□□ 1.56
CPNE1-212ENST00000430570 ARCN1P48444 511 aaKnown RBP24.79■■□□□ 1.56
CPNE1-212ENST00000430570 ILF3Q12906 894 aaKnown RBP eCLIP24.79■■□□□ 1.567e-7■■■■■ 35.6
CPNE1-212ENST00000430570 CALCOCO2Q13137 446 aa24.79■■□□□ 1.56
CPNE1-212ENST00000430570 PUM1Q14671 1186 aaKnown RBP eCLIP24.79■■□□□ 1.56
CPNE1-212ENST00000430570 FASTKD1Q53R41 847 aaKnown RBP24.79■■□□□ 1.56
CPNE1-212ENST00000430570 DNAJC21Q5F1R6 531 aaKnown RBP24.79■■□□□ 1.56
CPNE1-212ENST00000430570 KIAA0930Q6ICG6 404 aaPredicted RBP24.79■■□□□ 1.56
CPNE1-212ENST00000430570 SLC30A9Q6PML9 568 aa24.79■■□□□ 1.56
CPNE1-212ENST00000430570 C11orf96Q7Z7L8 435 aa24.79■■□□□ 1.56
CPNE1-212ENST00000430570 LRRTM4Q86VH4 590 aa24.79■■□□□ 1.56
CPNE1-212ENST00000430570 PDIK1LQ8N165 341 aa24.79■■□□□ 1.56
CPNE1-212ENST00000430570 SDR16C5Q8N3Y7 309 aa24.79■■□□□ 1.56
CPNE1-212ENST00000430570 CNDP2Q96KP4 475 aaKnown RBP24.79■■□□□ 1.56
CPNE1-212ENST00000430570 EBNA1BP2Q99848 306 aaKnown RBP24.79■■□□□ 1.56
CPNE1-212ENST00000430570 DUSP23Q9BVJ7 150 aa24.79■■□□□ 1.56
CPNE1-212ENST00000430570 GSDMCQ9BYG8 508 aa24.79■■□□□ 1.56
CPNE1-212ENST00000430570 ZCCHC2Q9C0B9 1178 aaKnown RBP24.79■■□□□ 1.56
CPNE1-212ENST00000430570 SPATS2LQ9NUQ6 558 aaKnown RBP24.79■■□□□ 1.56
CPNE1-212ENST00000430570 KCNK6Q9Y257 313 aa24.79■■□□□ 1.56
CPNE1-212ENST00000430570 ESYT3A0FGR9 886 aa24.78■■□□□ 1.56
CPNE1-212ENST00000430570 BHMG1C9JSJ3 638 aaPredicted RBP24.78■■□□□ 1.56
CPNE1-212ENST00000430570 ALPPL2P10696 532 aa24.78■■□□□ 1.56
CPNE1-212ENST00000430570 ACTR1BP42025 376 aa24.78■■□□□ 1.56
CPNE1-212ENST00000430570 NOVA1P51513 510 aaKnown RBP24.78■■□□□ 1.56
CPNE1-212ENST00000430570 ARL4CP56559 192 aa24.78■■□□□ 1.56
CPNE1-212ENST00000430570 ACTR1AP61163 376 aa24.78■■□□□ 1.56
CPNE1-212ENST00000430570 HIF1AQ16665 826 aa24.78■■□□□ 1.56
CPNE1-212ENST00000430570 PROX2Q3B8N5 592 aa24.78■■□□□ 1.56
CPNE1-212ENST00000430570 C6orf132Q5T0Z8 1188 aa24.78■■□□□ 1.56
CPNE1-212ENST00000430570 LVRNQ6Q4G3 990 aa24.78■■□□□ 1.56
CPNE1-212ENST00000430570 ZDHHC24Q6UX98 284 aa24.78■■□□□ 1.56
CPNE1-212ENST00000430570 TRAPPC5Q8IUR0 188 aa24.78■■□□□ 1.56
CPNE1-212ENST00000430570 BEND7Q8N7W2 519 aaPredicted RBP24.78■■□□□ 1.56
CPNE1-212ENST00000430570 LRRN4CLQ8ND94 238 aa24.78■■□□□ 1.56
CPNE1-212ENST00000430570 FAM46DQ8NEK8 389 aa24.78■■□□□ 1.56
CPNE1-212ENST00000430570 ART4Q93070 314 aa24.78■■□□□ 1.56
CPNE1-212ENST00000430570 DCUN1D1Q96GG9 259 aa24.78■■□□□ 1.56
CPNE1-212ENST00000430570 APOLD1Q96LR9 279 aa24.78■■□□□ 1.56
CPNE1-212ENST00000430570 L2HGDHQ9H9P8 463 aa24.78■■□□□ 1.56
CPNE1-212ENST00000430570 CATSPERZQ9NTU4 200 aa24.78■■□□□ 1.56
CPNE1-212ENST00000430570 TAAR2Q9P1P5 351 aa24.78■■□□□ 1.56
CPNE1-212ENST00000430570 FTSJ1Q9UET6 329 aa24.78■■□□□ 1.56
CPNE1-212ENST00000430570 DMGDHQ9UI17 866 aaKnown RBP24.78■■□□□ 1.56
CPNE1-212ENST00000430570 GPR34Q9UPC5 381 aa24.78■■□□□ 1.56
CPNE1-212ENST00000430570 PRSS21Q9Y6M0 314 aa24.78■■□□□ 1.56
CPNE1-212ENST00000430570 LY6G6EA0A0G2JKS1 128 aa24.77■■□□□ 1.56
CPNE1-212ENST00000430570 SPAARA0A1B0GVQ0 90 aa24.77■■□□□ 1.56
CPNE1-212ENST00000430570 NDC80O14777 642 aa24.77■■□□□ 1.56
CPNE1-212ENST00000430570 KMOO15229 486 aa24.77■■□□□ 1.56
CPNE1-212ENST00000430570 CD3EAPO15446 510 aaKnown RBP24.77■■□□□ 1.56
CPNE1-212ENST00000430570 USP1O94782 785 aa24.77■■□□□ 1.56
CPNE1-212ENST00000430570 CEACAM1P13688 526 aa24.77■■□□□ 1.56
CPNE1-212ENST00000430570 ZNF7P17097 686 aaPredicted RBP24.77■■□□□ 1.56
CPNE1-212ENST00000430570 ELK3P41970 407 aa24.77■■□□□ 1.56
CPNE1-212ENST00000430570 DRG2P55039 364 aaKnown RBP24.77■■□□□ 1.56
CPNE1-212ENST00000430570 PLTPP55058 493 aa24.77■■□□□ 1.56
CPNE1-212ENST00000430570 TRIP6Q15654 476 aaKnown RBP24.77■■□□□ 1.56
CPNE1-212ENST00000430570 DNTTIP2Q5QJE6 756 aaKnown RBP24.77■■□□□ 1.56
CPNE1-212ENST00000430570 FAM181AQ8N9Y4 354 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms