RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 NFATC2Q13469 925 aa17.35■□□□□ 0.37
NUP50-208ENST00000430547 TRA2AQ13595 282 aaKnown RBP eCLIP17.35■□□□□ 0.37
NUP50-208ENST00000430547 TMEM164Q5U3C3 297 aa17.35■□□□□ 0.37
NUP50-208ENST00000430547 GPR155Q7Z3F1 870 aa17.35■□□□□ 0.37
NUP50-208ENST00000430547 TRAPPC5Q8IUR0 188 aa17.35■□□□□ 0.37
NUP50-208ENST00000430547 TRIM48Q8IWZ4 208 aa17.35■□□□□ 0.37
NUP50-208ENST00000430547 RCBTB1Q8NDN9 531 aa17.35■□□□□ 0.37
NUP50-208ENST00000430547 OR4D9Q8NGE8 314 aa17.35■□□□□ 0.37
NUP50-208ENST00000430547 CCDC110Q8TBZ0 833 aa17.35■□□□□ 0.37
NUP50-208ENST00000430547 BRSK1Q8TDC3 778 aa17.35■□□□□ 0.37
NUP50-208ENST00000430547 CCDC74BQ96LY2 380 aa17.35■□□□□ 0.37
NUP50-208ENST00000430547 IL26Q9NPH9 171 aa17.35■□□□□ 0.37
NUP50-208ENST00000430547 DNAJC16Q9Y2G8 782 aa17.35■□□□□ 0.37
NUP50-208ENST00000430547 ADGRG1Q9Y653 693 aa17.35■□□□□ 0.37
NUP50-208ENST00000430547 IGSF10Q6WRI0 2623 aa17.34■□□□□ 0.37
NUP50-208ENST00000430547 IGHV5-10-1A0A0J9YXX1 117 aa17.34■□□□□ 0.37
NUP50-208ENST00000430547 EIF4E1BA6NMX2 242 aaKnown RBP17.34■□□□□ 0.37
NUP50-208ENST00000430547 PDZK1P1A8MUH7 402 aa17.34■□□□□ 0.37
NUP50-208ENST00000430547 KRT86O43790 486 aa17.34■□□□□ 0.37
NUP50-208ENST00000430547 MAPK9P45984 424 aa17.34■□□□□ 0.37
NUP50-208ENST00000430547 LIMK2P53671 638 aa17.34■□□□□ 0.37
NUP50-208ENST00000430547 TMEM115Q12893 351 aaPredicted RBP17.34■□□□□ 0.37
NUP50-208ENST00000430547 C16orf72Q14CZ0 275 aa17.34■□□□□ 0.37
NUP50-208ENST00000430547 LDLRAP1Q5SW96 308 aa17.34■□□□□ 0.37
NUP50-208ENST00000430547 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.34■□□□□ 0.37
NUP50-208ENST00000430547 ARHGEF18Q6ZSZ5 1173 aa17.34■□□□□ 0.37
NUP50-208ENST00000430547 RNF10Q8N5U6 811 aaKnown RBP17.34■□□□□ 0.37
NUP50-208ENST00000430547 CCDC112Q8NEF3 446 aa17.34■□□□□ 0.37
NUP50-208ENST00000430547 DTX3LQ8TDB6 740 aa17.34■□□□□ 0.37
NUP50-208ENST00000430547 APOL2Q9BQE5 337 aa17.34■□□□□ 0.37
NUP50-208ENST00000430547 TIMM29Q9BSF4 260 aa17.34■□□□□ 0.37
NUP50-208ENST00000430547 PRDM8Q9NQV8 689 aa17.34■□□□□ 0.37
NUP50-208ENST00000430547 CAPN6Q9Y6Q1 641 aa17.34■□□□□ 0.37
NUP50-208ENST00000430547 A0A0U1RQJ8 604 aa17.33■□□□□ 0.36
NUP50-208ENST00000430547 A6NCN8 305 aa17.33■□□□□ 0.36
NUP50-208ENST00000430547 NVLO15381 856 aaKnown RBP17.33■□□□□ 0.36
NUP50-208ENST00000430547 LPOP22079 712 aaPredicted RBP17.33■□□□□ 0.36
NUP50-208ENST00000430547 AKT1P31749 480 aa17.33■□□□□ 0.36
NUP50-208ENST00000430547 CSF2RBP32927 897 aa17.33■□□□□ 0.36
NUP50-208ENST00000430547 CSTF2P33240 577 aaKnown RBP eCLIP17.33■□□□□ 0.36
NUP50-208ENST00000430547 EPHA4P54764 986 aa17.33■□□□□ 0.36
NUP50-208ENST00000430547 PDE1BQ01064 536 aa17.33■□□□□ 0.36
NUP50-208ENST00000430547 SQSTM1Q13501 440 aa17.33■□□□□ 0.36
NUP50-208ENST00000430547 TAF1AQ15573 450 aaPredicted RBP17.33■□□□□ 0.36
NUP50-208ENST00000430547 CHRNA6Q15825 494 aa17.33■□□□□ 0.36
NUP50-208ENST00000430547 SEPT7Q16181 437 aaKnown RBP17.33■□□□□ 0.36
NUP50-208ENST00000430547 KHDC1Q4VXA5 237 aaKnown RBP17.33■□□□□ 0.36
NUP50-208ENST00000430547 SEL1L2Q5TEA6 688 aa17.33■□□□□ 0.36
NUP50-208ENST00000430547 TMEM71Q6P5X7 295 aa17.33■□□□□ 0.36
NUP50-208ENST00000430547 ZNF574Q6ZN55 896 aaPredicted RBP17.33■□□□□ 0.36
NUP50-208ENST00000430547 UBL7Q96S82 380 aaPredicted RBP17.33■□□□□ 0.36
NUP50-208ENST00000430547 TBL1YQ9BQ87 522 aa17.33■□□□□ 0.36
NUP50-208ENST00000430547 GORASP1Q9BQQ3 440 aa17.33■□□□□ 0.36
NUP50-208ENST00000430547 CPNE7Q9UBL6 633 aa17.33■□□□□ 0.36
NUP50-208ENST00000430547 GUCA1BQ9UMX6 200 aa17.33■□□□□ 0.36
NUP50-208ENST00000430547 ARL5AQ9Y689 179 aa17.33■□□□□ 0.36
NUP50-208ENST00000430547 PRAMEF33A0A0G2JMD5 474 aa17.32■□□□□ 0.36
NUP50-208ENST00000430547 TEX51A0A1B0GUA7 166 aa17.32■□□□□ 0.36
NUP50-208ENST00000430547 C5orf60A6NFR6 353 aa17.32■□□□□ 0.36
NUP50-208ENST00000430547 DDX3YO15523 660 aaKnown RBP17.32■□□□□ 0.36
NUP50-208ENST00000430547 UGT1A9O60656 530 aa17.32■□□□□ 0.36
NUP50-208ENST00000430547 PRAMEF10O60809 474 aa17.32■□□□□ 0.36
NUP50-208ENST00000430547 PRAMEF1O95521 474 aa17.32■□□□□ 0.36
NUP50-208ENST00000430547 CRTAMO95727 393 aa17.32■□□□□ 0.36
NUP50-208ENST00000430547 VIPP01282 170 aa17.32■□□□□ 0.36
NUP50-208ENST00000430547 THRAP10827 490 aa17.32■□□□□ 0.36
NUP50-208ENST00000430547 HOXB3P14651 431 aaPredicted RBP17.32■□□□□ 0.36
NUP50-208ENST00000430547 UGT1A6P19224 532 aa17.32■□□□□ 0.36
NUP50-208ENST00000430547 IDSP22304 550 aa17.32■□□□□ 0.36
NUP50-208ENST00000430547 UGT1A1P22309 533 aa17.32■□□□□ 0.36
NUP50-208ENST00000430547 UGT1A4P22310 534 aa17.32■□□□□ 0.36
NUP50-208ENST00000430547 MPSTP25325 297 aa17.32■□□□□ 0.36
NUP50-208ENST00000430547 UGT1A3P35503 534 aa17.32■□□□□ 0.36
NUP50-208ENST00000430547 ETV5P41161 510 aa17.32■□□□□ 0.36
NUP50-208ENST00000430547 RANBP10Q6VN20 620 aa17.32■□□□□ 0.36
NUP50-208ENST00000430547 AGBL5Q8NDL9 886 aa17.32■□□□□ 0.36
NUP50-208ENST00000430547 DDHD1Q8NEL9 900 aa17.32■□□□□ 0.36
NUP50-208ENST00000430547 NCSTNQ92542 709 aa17.32■□□□□ 0.36
NUP50-208ENST00000430547 USP7Q93009 1102 aa17.32■□□□□ 0.36
NUP50-208ENST00000430547 HES6Q96HZ4 224 aa17.32■□□□□ 0.36
NUP50-208ENST00000430547 EPB41L1Q9H4G0 881 aa17.32■□□□□ 0.36
NUP50-208ENST00000430547 UGT1A7Q9HAW7 530 aa17.32■□□□□ 0.36
NUP50-208ENST00000430547 UGT1A10Q9HAW8 530 aa17.32■□□□□ 0.36
NUP50-208ENST00000430547 UGT1A8Q9HAW9 530 aa17.32■□□□□ 0.36
NUP50-208ENST00000430547 CPNE5Q9HCH3 593 aa17.32■□□□□ 0.36
NUP50-208ENST00000430547 SLC23A2Q9UGH3 650 aa17.32■□□□□ 0.36
NUP50-208ENST00000430547 TMPRSS11EQ9UL52 423 aa17.32■□□□□ 0.36
NUP50-208ENST00000430547 LOC400499M0QZD8 3231 aa17.31■□□□□ 0.36
NUP50-208ENST00000430547 LIPCP11150 499 aa17.31■□□□□ 0.36
NUP50-208ENST00000430547 MSH3P20585 1137 aa17.31■□□□□ 0.36
NUP50-208ENST00000430547 ADRA1AP35348 466 aa17.31■□□□□ 0.36
NUP50-208ENST00000430547 HALP42357 657 aa17.31■□□□□ 0.36
NUP50-208ENST00000430547 CLN3Q13286 438 aa17.31■□□□□ 0.36
NUP50-208ENST00000430547 OLIG2Q13516 323 aa17.31■□□□□ 0.36
NUP50-208ENST00000430547 P3H1Q32P28 736 aa17.31■□□□□ 0.36
NUP50-208ENST00000430547 SNAP47Q5SQN1 464 aa17.31■□□□□ 0.36
NUP50-208ENST00000430547 GPRC6AQ5T6X5 926 aa17.31■□□□□ 0.36
NUP50-208ENST00000430547 ARHGAP40Q5TG30 622 aa17.31■□□□□ 0.36
NUP50-208ENST00000430547 WDR74Q6RFH5 385 aaPredicted RBP17.31■□□□□ 0.36
NUP50-208ENST00000430547 CCDC81Q6ZN84 652 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms