RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 CDT1Q9H211 546 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 PPIL3Q9H2H8 161 aaKnown RBP2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 MVB12BQ9H7P6 319 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 BPIFA1Q9NP55 256 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 OLAHQ9NV23 265 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 MTMR10Q9NXD2 777 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 HAO2Q9NYQ3 351 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 GDE1Q9NZC3 331 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 TUBE1Q9UJT0 475 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 OSGIN1Q9UJX0 560 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 ACAD8Q9UKU7 415 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 ISY1Q9ULR0 285 aaKnown RBP2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 WBP11Q9Y2W2 641 aaKnown RBP2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 PTGDR2Q9Y5Y4 395 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 IGHV4-28A0A0C4DH34 117 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 A0A1B0GVT2 93 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 LRRC72A6NJI9 287 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 TTC36A6NLP5 189 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 OR6C76A6NM76 312 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 RTCAO00442 366 aaKnown RBP2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 IPO8O15397 1037 aaKnown RBP2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 CREG1O75629 220 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 RECQL5O94762 991 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 CELF2O95319 508 aaKnown RBP2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 GLUD1P00367 558 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 ICAM1P05362 532 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 TPOP07202 933 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 PRSS2P07478 247 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 NGFRP08138 427 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 HSP90AB1P08238 724 aaKnown RBP2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 PCNAP12004 261 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 PRLRP16471 622 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 TMEM11P17152 192 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 CYP11B2P19099 503 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 HNF4AP41235 474 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 RFX5P48382 616 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 AMTP48728 403 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 GLUD2P49448 558 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 GPR143P51810 404 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 ZXDBP98169 803 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 NAE1Q13564 534 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 KCNC3Q14003 757 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 LASP1Q14847 261 aaKnown RBP2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 SHBQ15464 509 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 SOWAHAQ2M3V2 549 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 TCTN1Q2MV58 587 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 USP41Q3LFD5 358 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 ATP13A5Q4VNC0 1218 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 RARS2Q5T160 578 aaKnown RBP2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 PPP1R21Q6ZMI0 780 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 PQLC2Q6ZP29 291 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 TRILQ7L0X0 811 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 DPPA4Q7L190 304 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 CCDC91Q7Z6B0 441 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 DSG4Q86SJ6 1040 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 ADHFE1Q8IWW8 467 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 NDUFAF2Q8N183 169 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 GUF1Q8N442 669 aaKnown RBP2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 ZCCHC9Q8N567 271 aaKnown RBP2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 OR8K5Q8NH50 307 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 OR14A16Q8NHC5 309 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 GPT2Q8TD30 523 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 FAM216AQ8WUB2 273 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 KCNE4Q8WWG9 221 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 KRT35Q92764 455 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 CORO2AQ92828 525 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 SNAPC3Q92966 411 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 ERGIC1Q969X5 290 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 ZNF479Q96JC4 524 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 SLC41A2Q96JW4 573 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 TMEM68Q96MH6 324 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 GBP5Q96PP8 586 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 INTS14Q96SY0 518 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 MEIS3Q99687 375 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 SEPT5Q99719 369 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 OLFM1Q99784 485 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 CITED2Q99967 270 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 NPFFR1Q9GZQ6 430 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 KCNN2Q9H2S1 579 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 SLCO5A1Q9H2Y9 848 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 OSGEPL1Q9H4B0 414 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 ESRP2Q9H6T0 727 aaKnown RBP2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 ANKRD10Q9NXR5 420 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 NDRG3Q9UGV2 375 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 KCNK7Q9Y2U2 307 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 LIPGQ9Y5X9 500 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 MAU2Q9Y6X3 613 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 GPRASP1Q5JY77 1395 aa2.95□□□□□ -1.94
HMGB1P9-201ENST00000429856 UTYO14607 1347 aa2.94□□□□□ -1.94
HMGB1P9-201ENST00000429856 TCRBV21S2A2A0A5A6 115 aa2.94□□□□□ -1.94
HMGB1P9-201ENST00000429856 FEZF1A0PJY2 475 aa2.94□□□□□ -1.94
HMGB1P9-201ENST00000429856 TYW5A2RUC4 315 aaKnown RBP2.94□□□□□ -1.94
HMGB1P9-201ENST00000429856 ENO4A6NNW6 628 aa2.94□□□□□ -1.94
HMGB1P9-201ENST00000429856 MAGEB17A8MXT2 336 aa2.94□□□□□ -1.94
HMGB1P9-201ENST00000429856 KDM4EB2RXH2 506 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P9-201ENST00000429856 ITM2AO43736 263 aa2.94□□□□□ -1.94
HMGB1P9-201ENST00000429856 SYNCRIPO60506 623 aaKnown RBP2.94□□□□□ -1.94
HMGB1P9-201ENST00000429856 RSL1D1O76021 490 aaKnown RBP2.94□□□□□ -1.94
HMGB1P9-201ENST00000429856 RGS11O94810 467 aa2.94□□□□□ -1.94
HMGB1P9-201ENST00000429856 MT-ND3P03897 115 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms