RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 KCNK6Q9Y257 313 aa14.39□□□□□ -0.11
SGCE-204ENST00000428696 DNAJC16Q9Y2G8 782 aa14.39□□□□□ -0.11
SGCE-204ENST00000428696 PCYT1BQ9Y5K3 369 aaPredicted RBP14.39□□□□□ -0.11
SGCE-204ENST00000428696 DNAH14Q0VDD8 3507 aa14.39□□□□□ -0.11
SGCE-204ENST00000428696 SPAARA0A1B0GVQ0 90 aa14.38□□□□□ -0.11
SGCE-204ENST00000428696 ESYT3A0FGR9 886 aa14.38□□□□□ -0.11
SGCE-204ENST00000428696 B4DGG1 531 aa14.38□□□□□ -0.11
SGCE-204ENST00000428696 CFAP99D6REC4 459 aa14.38□□□□□ -0.11
SGCE-204ENST00000428696 LMO7DNF2Z398 122 aa14.38□□□□□ -0.11
SGCE-204ENST00000428696 GIPC1O14908 333 aa14.38□□□□□ -0.11
SGCE-204ENST00000428696 CD3EAPO15446 510 aaKnown RBP14.38□□□□□ -0.11
SGCE-204ENST00000428696 NUAK1O60285 661 aa14.38□□□□□ -0.11
SGCE-204ENST00000428696 ACTR1BP42025 376 aa14.38□□□□□ -0.11
SGCE-204ENST00000428696 ACTR1AP61163 376 aa14.38□□□□□ -0.11
SGCE-204ENST00000428696 PDIA2Q13087 525 aaKnown RBP14.38□□□□□ -0.11
SGCE-204ENST00000428696 THOC5Q13769 683 aaKnown RBP14.38□□□□□ -0.11
SGCE-204ENST00000428696 TRADDQ15628 312 aa14.38□□□□□ -0.11
SGCE-204ENST00000428696 TRIP6Q15654 476 aaKnown RBP14.38□□□□□ -0.11
SGCE-204ENST00000428696 ANKRD20A4Q4UJ75 823 aa14.38□□□□□ -0.11
SGCE-204ENST00000428696 MSS51Q4VC12 460 aa14.38□□□□□ -0.11
SGCE-204ENST00000428696 DUPD1Q68J44 220 aa14.38□□□□□ -0.11
SGCE-204ENST00000428696 SDCCAG8Q86SQ7 713 aaPredicted RBP14.38□□□□□ -0.11
SGCE-204ENST00000428696 LRRTM4Q86VH4 590 aa14.38□□□□□ -0.11
SGCE-204ENST00000428696 MMGT1Q8N4V1 131 aa14.38□□□□□ -0.11
SGCE-204ENST00000428696 DDHD1Q8NEL9 900 aa14.38□□□□□ -0.11
SGCE-204ENST00000428696 DTX3LQ8TDB6 740 aa14.38□□□□□ -0.11
SGCE-204ENST00000428696 IFT81Q8WYA0 676 aa14.38□□□□□ -0.11
SGCE-204ENST00000428696 GLMNQ92990 594 aa14.38□□□□□ -0.11
SGCE-204ENST00000428696 SIGLEC10Q96LC7 697 aa14.38□□□□□ -0.11
SGCE-204ENST00000428696 CDC6Q99741 560 aa14.38□□□□□ -0.11
SGCE-204ENST00000428696 RMI1Q9H9A7 625 aa14.38□□□□□ -0.11
SGCE-204ENST00000428696 EPB41L5Q9HCM4 733 aa14.38□□□□□ -0.11
SGCE-204ENST00000428696 PPANQ9NQ55 473 aaKnown RBP14.38□□□□□ -0.11
SGCE-204ENST00000428696 KLC4Q9NSK0 619 aa14.38□□□□□ -0.11
SGCE-204ENST00000428696 C20orf96Q9NUD7 363 aaPredicted RBP14.38□□□□□ -0.11
SGCE-204ENST00000428696 TRNAU1APQ9NX07 287 aaKnown RBP14.38□□□□□ -0.11
SGCE-204ENST00000428696 ZDHHC3Q9NYG2 299 aa14.38□□□□□ -0.11
SGCE-204ENST00000428696 NLGN3Q9NZ94 848 aa14.38□□□□□ -0.11
SGCE-204ENST00000428696 WHRNQ9P202 907 aa14.38□□□□□ -0.11
SGCE-204ENST00000428696 CSNK1G3Q9Y6M4 447 aa14.38□□□□□ -0.11
SGCE-204ENST00000428696 TDRD6O60522 2096 aaKnown RBP14.38□□□□□ -0.11
SGCE-204ENST00000428696 DMXL1Q9Y485 3027 aa14.38□□□□□ -0.11
SGCE-204ENST00000428696 TMEM131Q92545 1883 aa14.37□□□□□ -0.11
SGCE-204ENST00000428696 CPED1A4D0V7 1026 aa14.37□□□□□ -0.11
SGCE-204ENST00000428696 H7C0S8 307 aa14.37□□□□□ -0.11
SGCE-204ENST00000428696 SMAPO00193 183 aa14.37□□□□□ -0.11
SGCE-204ENST00000428696 KMOO15229 486 aa14.37□□□□□ -0.11
SGCE-204ENST00000428696 DNAJC6O75061 913 aa14.37□□□□□ -0.11
SGCE-204ENST00000428696 POP7O75817 140 aaKnown RBP14.37□□□□□ -0.11
SGCE-204ENST00000428696 POLBP06746 335 aa14.37□□□□□ -0.11
SGCE-204ENST00000428696 PPARGP37231 505 aaPredicted RBP14.37□□□□□ -0.11
SGCE-204ENST00000428696 ELK3P41970 407 aa14.37□□□□□ -0.11
SGCE-204ENST00000428696 SIM1P81133 766 aaPredicted RBP14.37□□□□□ -0.11
SGCE-204ENST00000428696 PUM1Q14671 1186 aaKnown RBP eCLIP14.37□□□□□ -0.11
SGCE-204ENST00000428696 DBN1Q16643 649 aa14.37□□□□□ -0.11
SGCE-204ENST00000428696 KANSL1Q7Z3B3 1105 aa14.37□□□□□ -0.11
SGCE-204ENST00000428696 PIP4P1Q86T03 277 aa14.37□□□□□ -0.11
SGCE-204ENST00000428696 CLDN19Q8N6F1 224 aa14.37□□□□□ -0.11
SGCE-204ENST00000428696 BEND7Q8N7W2 519 aaPredicted RBP14.37□□□□□ -0.11
SGCE-204ENST00000428696 FCRL3Q96P31 734 aaPredicted RBP14.37□□□□□ -0.11
SGCE-204ENST00000428696 DUSP23Q9BVJ7 150 aa14.37□□□□□ -0.11
SGCE-204ENST00000428696 BOCQ9BWV1 1114 aa14.37□□□□□ -0.11
SGCE-204ENST00000428696 MRM3Q9HC36 420 aaKnown RBP14.37□□□□□ -0.11
SGCE-204ENST00000428696 SPATS2LQ9NUQ6 558 aaKnown RBP14.37□□□□□ -0.11
SGCE-204ENST00000428696 SLC23A2Q9UGH3 650 aa14.37□□□□□ -0.11
SGCE-204ENST00000428696 RIMKLBQ9ULI2 386 aa14.37□□□□□ -0.11
SGCE-204ENST00000428696 CHMP2BQ9UQN3 213 aa14.37□□□□□ -0.11
SGCE-204ENST00000428696 CABIN1Q9Y6J0 2220 aa14.37□□□□□ -0.11
SGCE-204ENST00000428696 FAM237BA0A1B0GVD1 139 aa14.36□□□□□ -0.11
SGCE-204ENST00000428696 ZNF500O60304 480 aaPredicted RBP14.36□□□□□ -0.11
SGCE-204ENST00000428696 NDUFS3O75489 264 aa14.36□□□□□ -0.11
SGCE-204ENST00000428696 RHOXF2BP0C7M4 288 aa14.36□□□□□ -0.11
SGCE-204ENST00000428696 ATP1B2P14415 290 aaPredicted RBP14.36□□□□□ -0.11
SGCE-204ENST00000428696 ACRV1P26436 265 aa14.36□□□□□ -0.11
SGCE-204ENST00000428696 PPM1FP49593 454 aaPredicted RBP14.36□□□□□ -0.11
SGCE-204ENST00000428696 DNAJC3Q13217 504 aa14.36□□□□□ -0.11
SGCE-204ENST00000428696 SEPT7Q16181 437 aaKnown RBP14.36□□□□□ -0.11
SGCE-204ENST00000428696 LYPLAL1Q5VWZ2 237 aa14.36□□□□□ -0.11
SGCE-204ENST00000428696 DBX2Q6ZNG2 339 aa14.36□□□□□ -0.11
SGCE-204ENST00000428696 CENPUQ71F23 418 aa14.36□□□□□ -0.11
SGCE-204ENST00000428696 IGDCC3Q8IVU1 814 aa14.36□□□□□ -0.11
SGCE-204ENST00000428696 AGGF1Q8N302 714 aaeCLIP14.36□□□□□ -0.11
SGCE-204ENST00000428696 OR4C6Q8NH72 309 aa14.36□□□□□ -0.11
SGCE-204ENST00000428696 GPBAR1Q8TDU6 330 aa14.36□□□□□ -0.11
SGCE-204ENST00000428696 HEXDCQ8WVB3 486 aa14.36□□□□□ -0.11
SGCE-204ENST00000428696 SCARF2Q96GP6 870 aaPredicted RBP14.36□□□□□ -0.11
SGCE-204ENST00000428696 EBNA1BP2Q99848 306 aaKnown RBP14.36□□□□□ -0.11
SGCE-204ENST00000428696 C19orf43Q9BQ61 176 aa14.36□□□□□ -0.11
SGCE-204ENST00000428696 RHOXF2Q9BQY4 288 aa14.36□□□□□ -0.11
SGCE-204ENST00000428696 SAYSD1Q9NPB0 183 aa14.36□□□□□ -0.11
SGCE-204ENST00000428696 TREX1Q9NSU2 369 aa14.36□□□□□ -0.11
SGCE-204ENST00000428696 SMOXQ9NWM0 555 aa14.36□□□□□ -0.11
SGCE-204ENST00000428696 TAAR2Q9P1P5 351 aa14.36□□□□□ -0.11
SGCE-204ENST00000428696 MARCH4Q9P2E8 410 aaPredicted RBP14.36□□□□□ -0.11
SGCE-204ENST00000428696 ZC3H7BQ9UGR2 993 aaKnown RBP14.36□□□□□ -0.11
SGCE-204ENST00000428696 UBA6A0AVT1 1052 aaPredicted RBP14.35□□□□□ -0.11
SGCE-204ENST00000428696 PDZK1P1A8MUH7 402 aa14.35□□□□□ -0.11
SGCE-204ENST00000428696 TPP1O14773 563 aa14.35□□□□□ -0.11
SGCE-204ENST00000428696 TM4SF5O14894 197 aa14.35□□□□□ -0.11
SGCE-204ENST00000428696 OR1I1O60431 355 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms