RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 SDC3O75056 442 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 MTX2O75431 263 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 NUDT14O95848 222 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 ANXA5P08758 320 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 SPAM1P38567 509 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 CTSOP43234 321 aaPredicted RBP10.56□□□□□ -0.72
TCOF1-204ENST00000427724 NUP107P57740 925 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 IL10RBQ08334 325 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 HNRNPDQ14103 355 aaKnown RBP10.56□□□□□ -0.72
TCOF1-204ENST00000427724 DMC1Q14565 340 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 C11orf91Q3C1V1 193 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 CCDC153Q494R4 210 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 GRTP1Q5TC63 336 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 ARCQ7LC44 396 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 SLC35F5Q8WV83 523 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 LMLNQ96KR4 655 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 HAPLN3Q96S86 360 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 CPNE1Q99829 537 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 SLC4A5Q9BY07 1137 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 FAM126AQ9BYI3 521 aaPredicted RBP10.56□□□□□ -0.72
TCOF1-204ENST00000427724 SSU72Q9NP77 194 aaKnown RBP10.56□□□□□ -0.72
TCOF1-204ENST00000427724 SH3BP4Q9P0V3 963 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 STYXL1Q9Y6J8 313 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 POLR2AP24928 1970 aaKnown RBP10.56□□□□□ -0.72
TCOF1-204ENST00000427724 ECM29Q5VYK3 1845 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 BCORQ6W2J9 1755 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 KPNA5O15131 536 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 STC2O76061 302 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 TGDSO95455 350 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 IL10P22301 178 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 MAOBP27338 520 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 EPHA3P29320 983 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 GRIA1P42261 906 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 MRPS15P82914 257 aaKnown RBP10.56□□□□□ -0.72
TCOF1-204ENST00000427724 AGKQ53H12 422 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 MS4A13Q5J8X5 152 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 AFTPHQ6ULP2 937 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 TMEM110Q86TL2 294 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 IGDCC3Q8IVU1 814 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 TMEFF1Q8IYR6 380 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 RBFAQ8N0V3 343 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 TBC1D17Q9HA65 648 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 ALKBH4Q9NXW9 302 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 TYROBPO43914 113 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 GCATO75600 419 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 PRAMEF1O95521 474 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 TNFP01375 233 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 ITGAXP20702 1163 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 MTTPP55157 894 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 NAA20P61599 178 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 CTBP1Q13363 440 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 SPANXN3Q5MJ09 141 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 FAAH2Q6GMR7 532 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 UTS2BQ765I0 119 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 HPS6Q86YV9 775 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 UNC5BQ8IZJ1 945 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 FBXO39Q8N4B4 442 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 PCDH19Q8TAB3 1148 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 KCTD13Q8WZ19 329 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 NCSTNQ92542 709 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 SEMA6AQ9H2E6 1030 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 MTG2Q9H4K7 406 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 RIC8BQ9NVN3 520 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 FNIP2Q9P278 1114 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 EIF2B4Q9UI10 523 aaKnown RBP10.56□□□□□ -0.72
TCOF1-204ENST00000427724 STON1Q9Y6Q2 735 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 COLEC10Q9Y6Z7 277 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 DOCK2Q92608 1830 aa10.56□□□□□ -0.72
TCOF1-204ENST00000427724 TOP3BO95985 862 aaKnown RBP10.55□□□□□ -0.72
TCOF1-204ENST00000427724 COX4I1P13073 169 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 PEX2P28328 305 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 GABRB2P47870 512 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 NDST2P52849 883 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 KRT72Q14CN4 511 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 FAM78AQ5JUQ0 283 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 CERCAMQ5T4B2 595 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 C22orf39Q6P5X5 142 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 CYP2R1Q6VVX0 501 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 OR4L1Q8NH43 312 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 ASZ1Q8WWH4 475 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 C7orf26Q96N11 449 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 SMOC2Q9H3U7 446 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 WDR55Q9H6Y2 383 aaPredicted RBP10.55□□□□□ -0.72
TCOF1-204ENST00000427724 TRPC4Q9UBN4 977 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 SORCS3Q9UPU3 1222 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 ORC6Q9Y5N6 252 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 IQCF5A8MTL0 148 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 METTL18O95568 372 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 RBP1P09455 135 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 LMAN2Q12907 356 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 STX5Q13190 355 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 ADRM1Q16186 407 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 RALGPS1Q5JS13 557 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 CRTC1Q6UUV9 634 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 RASGRP3Q8IV61 690 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 C10orf53Q8N6V4 93 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 PCYOX1LQ8NBM8 494 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 OTULINQ96BN8 352 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 C12orf66Q96MD2 445 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms