RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 USP7Q93009 1102 aa18.18■□□□□ 0.5
GPC1-205ENST00000427506 UBL7Q96S82 380 aaPredicted RBP18.18■□□□□ 0.5
GPC1-205ENST00000427506 APOL2Q9BQE5 337 aa18.18■□□□□ 0.5
GPC1-205ENST00000427506 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.18■□□□□ 0.5
GPC1-205ENST00000427506 SLC23A2Q9UGH3 650 aa18.18■□□□□ 0.5
GPC1-205ENST00000427506 ZFYVE26Q68DK2 2539 aa18.17■□□□□ 0.5
GPC1-205ENST00000427506 PRAMEF33A0A0G2JMD5 474 aa18.17■□□□□ 0.5
GPC1-205ENST00000427506 A6NCN8 305 aa18.17■□□□□ 0.5
GPC1-205ENST00000427506 PDZK1P1A8MUH7 402 aa18.17■□□□□ 0.5
GPC1-205ENST00000427506 HGSO14964 777 aaPredicted RBP18.17■□□□□ 0.5
GPC1-205ENST00000427506 NVLO15381 856 aaKnown RBP18.17■□□□□ 0.5
GPC1-205ENST00000427506 UGT1A9O60656 530 aa18.17■□□□□ 0.5
GPC1-205ENST00000427506 PRAMEF10O60809 474 aa18.17■□□□□ 0.5
GPC1-205ENST00000427506 PPFIA2O75334 1257 aa18.17■□□□□ 0.5
GPC1-205ENST00000427506 ZNF189O75820 626 aaPredicted RBP18.17■□□□□ 0.5
GPC1-205ENST00000427506 VCLP18206 1134 aa18.17■□□□□ 0.5
GPC1-205ENST00000427506 UGT1A6P19224 532 aa18.17■□□□□ 0.5
GPC1-205ENST00000427506 UGT1A1P22309 533 aa18.17■□□□□ 0.5
GPC1-205ENST00000427506 UGT1A4P22310 534 aa18.17■□□□□ 0.5
GPC1-205ENST00000427506 CSTF2P33240 577 aaKnown RBP eCLIP18.17■□□□□ 0.5
GPC1-205ENST00000427506 UGT1A3P35503 534 aa18.17■□□□□ 0.5
GPC1-205ENST00000427506 CLCNKAP51800 687 aa18.17■□□□□ 0.5
GPC1-205ENST00000427506 SQSTM1Q13501 440 aa18.17■□□□□ 0.5
GPC1-205ENST00000427506 TRA2AQ13595 282 aaKnown RBP eCLIP18.17■□□□□ 0.5
GPC1-205ENST00000427506 ITGA9Q13797 1035 aa18.17■□□□□ 0.5
GPC1-205ENST00000427506 CHRNA6Q15825 494 aa18.17■□□□□ 0.5
GPC1-205ENST00000427506 SEPT7Q16181 437 aaKnown RBP18.17■□□□□ 0.5
GPC1-205ENST00000427506 KHDC1Q4VXA5 237 aaKnown RBP18.17■□□□□ 0.5
GPC1-205ENST00000427506 TMEM164Q5U3C3 297 aa18.17■□□□□ 0.5
GPC1-205ENST00000427506 TMEM71Q6P5X7 295 aa18.17■□□□□ 0.5
GPC1-205ENST00000427506 TRAPPC5Q8IUR0 188 aa18.17■□□□□ 0.5
GPC1-205ENST00000427506 TRIM48Q8IWZ4 208 aa18.17■□□□□ 0.5
GPC1-205ENST00000427506 AVL9Q8NBF6 648 aa18.17■□□□□ 0.5
GPC1-205ENST00000427506 BRSK1Q8TDC3 778 aa18.17■□□□□ 0.5
GPC1-205ENST00000427506 LRRC45Q96CN5 670 aa18.17■□□□□ 0.5
GPC1-205ENST00000427506 SPATA13Q96N96 652 aa18.17■□□□□ 0.5
GPC1-205ENST00000427506 PPP1R2P1Q96PQ5 205 aa18.17■□□□□ 0.5
GPC1-205ENST00000427506 GORASP1Q9BQQ3 440 aa18.17■□□□□ 0.5
GPC1-205ENST00000427506 TIMM29Q9BSF4 260 aa18.17■□□□□ 0.5
GPC1-205ENST00000427506 ZCCHC2Q9C0B9 1178 aaKnown RBP18.17■□□□□ 0.5
GPC1-205ENST00000427506 UGT1A7Q9HAW7 530 aa18.17■□□□□ 0.5
GPC1-205ENST00000427506 UGT1A10Q9HAW8 530 aa18.17■□□□□ 0.5
GPC1-205ENST00000427506 UGT1A8Q9HAW9 530 aa18.17■□□□□ 0.5
GPC1-205ENST00000427506 TMEM9Q9P0T7 183 aa18.17■□□□□ 0.5
GPC1-205ENST00000427506 CPNE7Q9UBL6 633 aa18.17■□□□□ 0.5
GPC1-205ENST00000427506 TMPRSS11EQ9UL52 423 aa18.17■□□□□ 0.5
GPC1-205ENST00000427506 KIF26BQ2KJY2 2108 aa18.17■□□□□ 0.5
GPC1-205ENST00000427506 TEX51A0A1B0GUA7 166 aa18.16■□□□□ 0.5
GPC1-205ENST00000427506 C2orf81A6NN90 581 aa18.16■□□□□ 0.5
GPC1-205ENST00000427506 CCL4P13236 92 aa18.16■□□□□ 0.5
GPC1-205ENST00000427506 LPOP22079 712 aaPredicted RBP18.16■□□□□ 0.5
GPC1-205ENST00000427506 CSF2RBP32927 897 aa18.16■□□□□ 0.5
GPC1-205ENST00000427506 CFHR1Q03591 330 aa18.16■□□□□ 0.5
GPC1-205ENST00000427506 CLN3Q13286 438 aa18.16■□□□□ 0.5
GPC1-205ENST00000427506 SNAP47Q5SQN1 464 aa18.16■□□□□ 0.5
GPC1-205ENST00000427506 LDLRAP1Q5SW96 308 aa18.16■□□□□ 0.5
GPC1-205ENST00000427506 AGBL5Q8NDL9 886 aa18.16■□□□□ 0.5
GPC1-205ENST00000427506 DTX3LQ8TDB6 740 aa18.16■□□□□ 0.5
GPC1-205ENST00000427506 NCSTNQ92542 709 aa18.16■□□□□ 0.5
GPC1-205ENST00000427506 ARL5AQ9Y689 179 aa18.16■□□□□ 0.5
GPC1-205ENST00000427506 UNC13CQ8NB66 2214 aa18.16■□□□□ 0.5
GPC1-205ENST00000427506 DDX3YO15523 660 aaKnown RBP18.15■□□□□ 0.5
GPC1-205ENST00000427506 VIPP01282 170 aa18.15■□□□□ 0.5
GPC1-205ENST00000427506 THRAP10827 490 aa18.15■□□□□ 0.5
GPC1-205ENST00000427506 IDSP22304 550 aa18.15■□□□□ 0.5
GPC1-205ENST00000427506 VAC14Q08AM6 782 aa18.15■□□□□ 0.5
GPC1-205ENST00000427506 OLIG2Q13516 323 aa18.15■□□□□ 0.5
GPC1-205ENST00000427506 PTPRCAPQ14761 206 aa18.15■□□□□ 0.5
GPC1-205ENST00000427506 TAF1AQ15573 450 aaPredicted RBP18.15■□□□□ 0.5
GPC1-205ENST00000427506 RANBP10Q6VN20 620 aa18.15■□□□□ 0.5
GPC1-205ENST00000427506 CCDC81Q6ZN84 652 aa18.15■□□□□ 0.5
GPC1-205ENST00000427506 ARHGEF18Q6ZSZ5 1173 aa18.15■□□□□ 0.5
GPC1-205ENST00000427506 ZNF547Q8IVP9 402 aa18.15■□□□□ 0.5
GPC1-205ENST00000427506 CCDC112Q8NEF3 446 aa18.15■□□□□ 0.5
GPC1-205ENST00000427506 BBC3Q96PG8 261 aaPredicted RBP18.15■□□□□ 0.5
GPC1-205ENST00000427506 NBEAQ8NFP9 2946 aa18.14■□□□□ 0.49
GPC1-205ENST00000427506 C5orf60A6NFR6 353 aa18.14■□□□□ 0.49
GPC1-205ENST00000427506 A8MU76 341 aa18.14■□□□□ 0.49
GPC1-205ENST00000427506 GPR39O43194 453 aa18.14■□□□□ 0.49
GPC1-205ENST00000427506 CRTAMO95727 393 aa18.14■□□□□ 0.49
GPC1-205ENST00000427506 XRCC1P18887 633 aaPredicted RBP18.14■□□□□ 0.49
GPC1-205ENST00000427506 RPL10P27635 214 aaKnown RBP18.14■□□□□ 0.49
GPC1-205ENST00000427506 AKT1P31749 480 aa18.14■□□□□ 0.49
GPC1-205ENST00000427506 ADRA1AP35348 466 aa18.14■□□□□ 0.49
GPC1-205ENST00000427506 EPHA4P54764 986 aa18.14■□□□□ 0.49
GPC1-205ENST00000427506 GSDMDP57764 484 aa18.14■□□□□ 0.49
GPC1-205ENST00000427506 TGIF1Q15583 401 aa18.14■□□□□ 0.49
GPC1-205ENST00000427506 GPRC6AQ5T6X5 926 aa18.14■□□□□ 0.49
GPC1-205ENST00000427506 WDR74Q6RFH5 385 aaPredicted RBP18.14■□□□□ 0.49
GPC1-205ENST00000427506 FAM129CQ86XR2 697 aa18.14■□□□□ 0.49
GPC1-205ENST00000427506 RNF10Q8N5U6 811 aaKnown RBP18.14■□□□□ 0.49
GPC1-205ENST00000427506 FAM71DQ8N9W8 422 aa18.14■□□□□ 0.49
GPC1-205ENST00000427506 OR4K2Q8NGD2 314 aa18.14■□□□□ 0.49
GPC1-205ENST00000427506 ZNF398Q8TD17 642 aa18.14■□□□□ 0.49
GPC1-205ENST00000427506 CCNL2Q96S94 520 aaPredicted RBP18.14■□□□□ 0.49
GPC1-205ENST00000427506 TBL1YQ9BQ87 522 aa18.14■□□□□ 0.49
GPC1-205ENST00000427506 TBC1D10AQ9BXI6 508 aa18.14■□□□□ 0.49
GPC1-205ENST00000427506 TSGA10Q9BZW7 698 aa18.14■□□□□ 0.49
GPC1-205ENST00000427506 FOXJ2Q9P0K8 574 aa18.14■□□□□ 0.49
GPC1-205ENST00000427506 SCHIP1Q9P0W5 487 aaPredicted RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms