RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 PTPRCAPQ14761 206 aa18.2■□□□□ 0.5
NUP50-207ENST00000424634 KIR2DS5Q14953 304 aa18.2■□□□□ 0.5
NUP50-207ENST00000424634 C11orf96Q7Z7L8 435 aa18.2■□□□□ 0.5
NUP50-207ENST00000424634 LRRTM4Q86VH4 590 aa18.2■□□□□ 0.5
NUP50-207ENST00000424634 LRRC57Q8N9N7 239 aa18.2■□□□□ 0.5
NUP50-207ENST00000424634 AGBL5Q8NDL9 886 aa18.2■□□□□ 0.5
NUP50-207ENST00000424634 OR10G6Q8NH81 332 aa18.2■□□□□ 0.5
NUP50-207ENST00000424634 ALG3Q92685 438 aa18.2■□□□□ 0.5
NUP50-207ENST00000424634 TAAR9Q96RI9 348 aa18.2■□□□□ 0.5
NUP50-207ENST00000424634 FAM118BQ9BPY3 351 aa18.2■□□□□ 0.5
NUP50-207ENST00000424634 TBC1D10AQ9BXI6 508 aa18.2■□□□□ 0.5
NUP50-207ENST00000424634 OSBPL8Q9BZF1 889 aa18.2■□□□□ 0.5
NUP50-207ENST00000424634 B3GNT4Q9C0J1 378 aa18.2■□□□□ 0.5
NUP50-207ENST00000424634 OSGEPL1Q9H4B0 414 aa18.2■□□□□ 0.5
NUP50-207ENST00000424634 UGT1A7Q9HAW7 530 aa18.2■□□□□ 0.5
NUP50-207ENST00000424634 UGT1A10Q9HAW8 530 aa18.2■□□□□ 0.5
NUP50-207ENST00000424634 UGT1A8Q9HAW9 530 aa18.2■□□□□ 0.5
NUP50-207ENST00000424634 ZNF624Q9P2J8 865 aaPredicted RBP18.2■□□□□ 0.5
NUP50-207ENST00000424634 RSPH14Q9UHP6 348 aa18.2■□□□□ 0.5
NUP50-207ENST00000424634 EFR3BQ9Y2G0 817 aa18.2■□□□□ 0.5
NUP50-207ENST00000424634 GRID2IPA4D2P6 1211 aa18.19■□□□□ 0.5
NUP50-207ENST00000424634 OR5K4A6NMS3 321 aa18.19■□□□□ 0.5
NUP50-207ENST00000424634 GAPDHSO14556 408 aaPredicted RBP18.19■□□□□ 0.5
NUP50-207ENST00000424634 GPR39O43194 453 aa18.19■□□□□ 0.5
NUP50-207ENST00000424634 DUX1O43812 170 aa18.19■□□□□ 0.5
NUP50-207ENST00000424634 PYGMP11217 842 aa18.19■□□□□ 0.5
NUP50-207ENST00000424634 HLA-DPA1P20036 260 aa18.19■□□□□ 0.5
NUP50-207ENST00000424634 PTPN7P35236 360 aa18.19■□□□□ 0.5
NUP50-207ENST00000424634 SLC19A1P41440 591 aa18.19■□□□□ 0.5
NUP50-207ENST00000424634 NAP1L1P55209 391 aaKnown RBP18.19■□□□□ 0.5
NUP50-207ENST00000424634 CHRNA6Q15825 494 aa18.19■□□□□ 0.5
NUP50-207ENST00000424634 SNAP47Q5SQN1 464 aa18.19■□□□□ 0.5
NUP50-207ENST00000424634 WDR74Q6RFH5 385 aaPredicted RBP18.19■□□□□ 0.5
NUP50-207ENST00000424634 ARHGAP22Q7Z5H3 698 aa18.19■□□□□ 0.5
NUP50-207ENST00000424634 VASH2Q86V25 355 aa18.19■□□□□ 0.5
NUP50-207ENST00000424634 TMEM139Q8IV31 216 aa18.19■□□□□ 0.5
NUP50-207ENST00000424634 DTX3LQ8TDB6 740 aa18.19■□□□□ 0.5
NUP50-207ENST00000424634 BLOC1S5Q8TDH9 187 aa18.19■□□□□ 0.5
NUP50-207ENST00000424634 NCSTNQ92542 709 aa18.19■□□□□ 0.5
NUP50-207ENST00000424634 SH3KBP1Q96B97 665 aa18.19■□□□□ 0.5
NUP50-207ENST00000424634 WBP1Q96G27 269 aa18.19■□□□□ 0.5
NUP50-207ENST00000424634 CALR3Q96L12 384 aaKnown RBP18.19■□□□□ 0.5
NUP50-207ENST00000424634 HELZ2Q9BYK8 2649 aaKnown RBP18.19■□□□□ 0.5
NUP50-207ENST00000424634 GBA3Q9H227 469 aa18.19■□□□□ 0.5
NUP50-207ENST00000424634 DNAJC16Q9Y2G8 782 aa18.19■□□□□ 0.5
NUP50-207ENST00000424634 A0A0U1RQJ8 604 aa18.18■□□□□ 0.5
NUP50-207ENST00000424634 CCDC66A2RUB6 948 aa18.18■□□□□ 0.5
NUP50-207ENST00000424634 A8MU76 341 aa18.18■□□□□ 0.5
NUP50-207ENST00000424634 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.18■□□□□ 0.5
NUP50-207ENST00000424634 SLC2A4P14672 509 aa18.18■□□□□ 0.5
NUP50-207ENST00000424634 BRAFP15056 766 aa18.18■□□□□ 0.5
NUP50-207ENST00000424634 XRCC1P18887 633 aaPredicted RBP18.18■□□□□ 0.5
NUP50-207ENST00000424634 WT1P19544 449 aaPredicted RBP18.18■□□□□ 0.5
NUP50-207ENST00000424634 CSTF2P33240 577 aaKnown RBP eCLIP18.18■□□□□ 0.5
NUP50-207ENST00000424634 ADRA1AP35348 466 aa18.18■□□□□ 0.5
NUP50-207ENST00000424634 VAV2P52735 878 aa18.18■□□□□ 0.5
NUP50-207ENST00000424634 OLIG2Q13516 323 aa18.18■□□□□ 0.5
NUP50-207ENST00000424634 INSCQ1MX18 579 aa18.18■□□□□ 0.5
NUP50-207ENST00000424634 TAF1BQ53T94 588 aaPredicted RBP18.18■□□□□ 0.5
NUP50-207ENST00000424634 CCDC181Q5TID7 509 aa18.18■□□□□ 0.5
NUP50-207ENST00000424634 TMEM164Q5U3C3 297 aa18.18■□□□□ 0.5
NUP50-207ENST00000424634 FAM151BQ6UXP7 276 aa18.18■□□□□ 0.5
NUP50-207ENST00000424634 RANBP10Q6VN20 620 aa18.18■□□□□ 0.5
NUP50-207ENST00000424634 ZNF843Q8N446 348 aa18.18■□□□□ 0.5
NUP50-207ENST00000424634 BMPERQ8N8U9 685 aa18.18■□□□□ 0.5
NUP50-207ENST00000424634 ART4Q93070 314 aa18.18■□□□□ 0.5
NUP50-207ENST00000424634 TIMM29Q9BSF4 260 aa18.18■□□□□ 0.5
NUP50-207ENST00000424634 SEMA4CQ9C0C4 833 aa18.18■□□□□ 0.5
NUP50-207ENST00000424634 OGFRQ9NZT2 677 aa18.18■□□□□ 0.5
NUP50-207ENST00000424634 HACD3Q9P035 362 aa18.18■□□□□ 0.5
NUP50-207ENST00000424634 PCDHGA3Q9Y5H0 932 aa18.18■□□□□ 0.5
NUP50-207ENST00000424634 B3GALT1Q9Y5Z6 326 aa18.18■□□□□ 0.5
NUP50-207ENST00000424634 EFCAB7A8K855 629 aa18.17■□□□□ 0.5
NUP50-207ENST00000424634 RBP3P10745 1247 aa18.17■□□□□ 0.5
NUP50-207ENST00000424634 RPL10P27635 214 aaKnown RBP18.17■□□□□ 0.5
NUP50-207ENST00000424634 CD82P27701 267 aa18.17■□□□□ 0.5
NUP50-207ENST00000424634 SPAM1P38567 509 aa18.17■□□□□ 0.5
NUP50-207ENST00000424634 MAPK9P45984 424 aa18.17■□□□□ 0.5
NUP50-207ENST00000424634 PPM1FP49593 454 aaPredicted RBP18.17■□□□□ 0.5
NUP50-207ENST00000424634 EPHA4P54764 986 aa18.17■□□□□ 0.5
NUP50-207ENST00000424634 RWDD2BP57060 319 aa18.17■□□□□ 0.5
NUP50-207ENST00000424634 EIF3EP60228 445 aaKnown RBP18.17■□□□□ 0.5
NUP50-207ENST00000424634 C19orf57Q0VDD7 668 aa18.17■□□□□ 0.5
NUP50-207ENST00000424634 LY6DQ14210 128 aa18.17■□□□□ 0.5
NUP50-207ENST00000424634 SEPT7Q16181 437 aaKnown RBP18.17■□□□□ 0.5
NUP50-207ENST00000424634 ANKRD20A2Q5SQ80 823 aa18.17■□□□□ 0.5
NUP50-207ENST00000424634 ANKRD20A1Q5TYW2 823 aa18.17■□□□□ 0.5
NUP50-207ENST00000424634 ANKRD20A3Q5VUR7 823 aa18.17■□□□□ 0.5
NUP50-207ENST00000424634 ABRAXAS1Q6UWZ7 409 aa18.17■□□□□ 0.5
NUP50-207ENST00000424634 GLT6D1Q7Z4J2 308 aa18.17■□□□□ 0.5
NUP50-207ENST00000424634 GDAP1Q8TB36 358 aa18.17■□□□□ 0.5
NUP50-207ENST00000424634 JPH3Q8WXH2 748 aaPredicted RBP18.17■□□□□ 0.5
NUP50-207ENST00000424634 FICDQ9BVA6 458 aa18.17■□□□□ 0.5
NUP50-207ENST00000424634 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.17■□□□□ 0.5
NUP50-207ENST00000424634 STN1Q9H668 368 aaKnown RBP18.17■□□□□ 0.5
NUP50-207ENST00000424634 SLC39A1Q9NY26 324 aa18.17■□□□□ 0.5
NUP50-207ENST00000424634 TRIM10Q9UDY6 481 aa18.17■□□□□ 0.5
NUP50-207ENST00000424634 SLC30A1Q9Y6M5 507 aa18.17■□□□□ 0.5
NUP50-207ENST00000424634 COL6A6A6NMZ7 2263 aa18.16■□□□□ 0.5
NUP50-207ENST00000424634 ZNF462Q96JM2 2506 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms