RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 PRAMEF17Q5VTA0 474 aa6.19□□□□□ -1.42
SDCBP-203ENST00000424270 PRAMEF13Q5VWM6 474 aa6.19□□□□□ -1.42
SDCBP-203ENST00000424270 AFMIDQ63HM1 303 aa6.19□□□□□ -1.42
SDCBP-203ENST00000424270 CNNM4Q6P4Q7 775 aa6.19□□□□□ -1.42
SDCBP-203ENST00000424270 FAM198BQ6UWH4 519 aa6.19□□□□□ -1.42
SDCBP-203ENST00000424270 CERS6Q6ZMG9 384 aa6.19□□□□□ -1.42
SDCBP-203ENST00000424270 SPOCD1Q6ZMY3 1216 aa6.19□□□□□ -1.42
SDCBP-203ENST00000424270 Q6ZVL8 140 aa6.19□□□□□ -1.42
SDCBP-203ENST00000424270 NCCRP1Q6ZVX7 275 aaPredicted RBP6.19□□□□□ -1.42
SDCBP-203ENST00000424270 B4GALNT4Q76KP1 1039 aa6.19□□□□□ -1.42
SDCBP-203ENST00000424270 RRAGAQ7L523 313 aa6.19□□□□□ -1.42
SDCBP-203ENST00000424270 SRLQ86TD4 932 aa6.19□□□□□ -1.42
SDCBP-203ENST00000424270 TMEM110Q86TL2 294 aa6.19□□□□□ -1.42
SDCBP-203ENST00000424270 FAM131BQ86XD5 332 aa6.19□□□□□ -1.42
SDCBP-203ENST00000424270 ZSWIM9Q86XI8 627 aa6.19□□□□□ -1.42
SDCBP-203ENST00000424270 GRAMD1CQ8IYS0 662 aa6.19□□□□□ -1.42
SDCBP-203ENST00000424270 EID3Q8N140 333 aa6.19□□□□□ -1.42
SDCBP-203ENST00000424270 SLC38A9Q8NBW4 561 aa6.19□□□□□ -1.42
SDCBP-203ENST00000424270 OR8K5Q8NH50 307 aa6.19□□□□□ -1.42
SDCBP-203ENST00000424270 TMEM158Q8WZ71 300 aa6.19□□□□□ -1.42
SDCBP-203ENST00000424270 N4BP2L2Q92802 583 aaPredicted RBP6.19□□□□□ -1.42
SDCBP-203ENST00000424270 AP2M1Q96CW1 435 aa6.19□□□□□ -1.42
SDCBP-203ENST00000424270 DTD2Q96FN9 168 aa6.19□□□□□ -1.42
SDCBP-203ENST00000424270 COQ10AQ96MF6 247 aa6.19□□□□□ -1.42
SDCBP-203ENST00000424270 PWWP2AQ96N64 755 aa6.19□□□□□ -1.42
SDCBP-203ENST00000424270 PLEKHG4BQ96PX9 1271 aa6.19□□□□□ -1.42
SDCBP-203ENST00000424270 TBCBQ99426 244 aa6.19□□□□□ -1.42
SDCBP-203ENST00000424270 C17orf62Q9BQA9 187 aa6.19□□□□□ -1.42
SDCBP-203ENST00000424270 DHRS4Q9BTZ2 278 aa6.19□□□□□ -1.42
SDCBP-203ENST00000424270 CINPQ9BW66 212 aaPredicted RBP6.19□□□□□ -1.42
SDCBP-203ENST00000424270 SLC24A3Q9HC58 644 aa6.19□□□□□ -1.42
SDCBP-203ENST00000424270 PLCB1Q9NQ66 1216 aa6.19□□□□□ -1.42
SDCBP-203ENST00000424270 SAMSN1Q9NSI8 373 aaKnown RBP6.19□□□□□ -1.42
SDCBP-203ENST00000424270 SEPT11Q9NVA2 429 aaKnown RBP6.19□□□□□ -1.42
SDCBP-203ENST00000424270 PPARGC1AQ9UBK2 798 aaKnown RBP6.19□□□□□ -1.42
SDCBP-203ENST00000424270 TSR3Q9UJK0 312 aaKnown RBP6.19□□□□□ -1.42
SDCBP-203ENST00000424270 PPT2Q9UMR5 302 aa6.19□□□□□ -1.42
SDCBP-203ENST00000424270 MEMO1Q9Y316 297 aa6.19□□□□□ -1.42
SDCBP-203ENST00000424270 LUC7L2Q9Y383 392 aaKnown RBP6.19□□□□□ -1.42
SDCBP-203ENST00000424270 JMJD1CQ15652 2540 aa6.19□□□□□ -1.42
SDCBP-203ENST00000424270 PRRC2AP48634 2157 aaKnown RBP6.18□□□□□ -1.42
SDCBP-203ENST00000424270 FER1L5A0AVI2 2057 aa6.18□□□□□ -1.42
SDCBP-203ENST00000424270 CCDC66A2RUB6 948 aa6.18□□□□□ -1.42
SDCBP-203ENST00000424270 CETN3O15182 167 aa6.18□□□□□ -1.42
SDCBP-203ENST00000424270 MLYCDO95822 493 aa6.18□□□□□ -1.42
SDCBP-203ENST00000424270 CPP00450 1065 aa6.18□□□□□ -1.42
SDCBP-203ENST00000424270 MYBL2P10244 700 aa6.18□□□□□ -1.42
SDCBP-203ENST00000424270 TFE3P19532 575 aaPredicted RBP6.18□□□□□ -1.42
SDCBP-203ENST00000424270 UGT1A4P22310 534 aa6.18□□□□□ -1.42
SDCBP-203ENST00000424270 GNA15P30679 374 aa6.18□□□□□ -1.42
SDCBP-203ENST00000424270 VIPR1P32241 457 aa6.18□□□□□ -1.42
SDCBP-203ENST00000424270 SPAM1P38567 509 aa6.18□□□□□ -1.42
SDCBP-203ENST00000424270 RPL34P49207 117 aaKnown RBP6.18□□□□□ -1.42
SDCBP-203ENST00000424270 PPP1CAP62136 330 aa6.18□□□□□ -1.42
SDCBP-203ENST00000424270 SLC6A3Q01959 620 aa6.18□□□□□ -1.42
SDCBP-203ENST00000424270 KEAP1Q14145 624 aa6.18□□□□□ -1.42
SDCBP-203ENST00000424270 GPR18Q14330 331 aa6.18□□□□□ -1.42
SDCBP-203ENST00000424270 SLC9A5Q14940 896 aa6.18□□□□□ -1.42
SDCBP-203ENST00000424270 CNGA3Q16281 694 aa6.18□□□□□ -1.42
SDCBP-203ENST00000424270 INAQ16352 499 aa6.18□□□□□ -1.42
SDCBP-203ENST00000424270 TDRD12Q587J7 1177 aaKnown RBP6.18□□□□□ -1.42
SDCBP-203ENST00000424270 RPUSD3Q6P087 351 aaKnown RBP6.18□□□□□ -1.42
SDCBP-203ENST00000424270 FAM173BQ6P4H8 233 aa6.18□□□□□ -1.42
SDCBP-203ENST00000424270 ISLR2Q6UXK2 745 aa6.18□□□□□ -1.42
SDCBP-203ENST00000424270 C3P1Q6ZMU1 363 aa6.18□□□□□ -1.42
SDCBP-203ENST00000424270 C16orf47Q6ZP98 133 aaPredicted RBP6.18□□□□□ -1.42
SDCBP-203ENST00000424270 HSD11B1LQ7Z5J1 315 aa6.18□□□□□ -1.42
SDCBP-203ENST00000424270 CAMKMTQ7Z624 323 aa6.18□□□□□ -1.42
SDCBP-203ENST00000424270 KMT5CQ86Y97 462 aa6.18□□□□□ -1.42
SDCBP-203ENST00000424270 TMEM174Q8WUU8 243 aa6.18□□□□□ -1.42
SDCBP-203ENST00000424270 KAT5Q92993 513 aa6.18□□□□□ -1.42
SDCBP-203ENST00000424270 TBC1D31Q96DN5 1066 aa6.18□□□□□ -1.42
SDCBP-203ENST00000424270 THOC3Q96J01 351 aaKnown RBP6.18□□□□□ -1.42
SDCBP-203ENST00000424270 SLC41A2Q96JW4 573 aa6.18□□□□□ -1.42
SDCBP-203ENST00000424270 LRFN5Q96NI6 719 aa6.18□□□□□ -1.42
SDCBP-203ENST00000424270 TLR10Q9BXR5 811 aa6.18□□□□□ -1.42
SDCBP-203ENST00000424270 RNF32Q9H0A6 362 aa6.18□□□□□ -1.42
SDCBP-203ENST00000424270 PDCL3Q9H2J4 239 aa6.18□□□□□ -1.42
SDCBP-203ENST00000424270 CLEC4MQ9H2X3 399 aaPredicted RBP6.18□□□□□ -1.42
SDCBP-203ENST00000424270 LIME1Q9H400 295 aa6.18□□□□□ -1.42
SDCBP-203ENST00000424270 UCK1Q9HA47 277 aa6.18□□□□□ -1.42
SDCBP-203ENST00000424270 KLC4Q9NSK0 619 aa6.18□□□□□ -1.42
SDCBP-203ENST00000424270 GPATCH2LQ9NWQ4 482 aa6.18□□□□□ -1.42
SDCBP-203ENST00000424270 IRAK4Q9NWZ3 460 aa6.18□□□□□ -1.42
SDCBP-203ENST00000424270 IFT80Q9P2H3 777 aaPredicted RBP6.18□□□□□ -1.42
SDCBP-203ENST00000424270 LHX3Q9UBR4 397 aa6.18□□□□□ -1.42
SDCBP-203ENST00000424270 TRIM10Q9UDY6 481 aa6.18□□□□□ -1.42
SDCBP-203ENST00000424270 OR12D3Q9UGF7 316 aa6.18□□□□□ -1.42
SDCBP-203ENST00000424270 KCNN3Q9UGI6 736 aa6.18□□□□□ -1.42
SDCBP-203ENST00000424270 CDC23Q9UJX2 597 aa6.18□□□□□ -1.42
SDCBP-203ENST00000424270 FBXL4Q9UKA2 621 aa6.18□□□□□ -1.42
SDCBP-203ENST00000424270 TRAF3IP3Q9Y228 551 aa6.18□□□□□ -1.42
SDCBP-203ENST00000424270 DNAJC16Q9Y2G8 782 aa6.18□□□□□ -1.42
SDCBP-203ENST00000424270 SIK3Q9Y2K2 1263 aa6.18□□□□□ -1.42
SDCBP-203ENST00000424270 STAB1Q9NY15 2570 aa6.18□□□□□ -1.42
SDCBP-203ENST00000424270 RTTNQ86VV8 2226 aa6.18□□□□□ -1.42
SDCBP-203ENST00000424270 MYO7BQ6PIF6 2116 aa6.17□□□□□ -1.42
SDCBP-203ENST00000424270 ACANP16112 2415 aa6.17□□□□□ -1.42
SDCBP-203ENST00000424270 TRAV17A0A0B4J275 112 aa6.17□□□□□ -1.42
SDCBP-203ENST00000424270 FAM237BA0A1B0GVD1 139 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms