RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 SEL1L2Q5TEA6 688 aa17.58■□□□□ 0.4
SBDSP1-202ENST00000423945 ZDHHC20Q5W0Z9 365 aa17.58■□□□□ 0.4
SBDSP1-202ENST00000423945 ARHGEF18Q6ZSZ5 1173 aa17.58■□□□□ 0.4
SBDSP1-202ENST00000423945 RAB11FIP2Q7L804 512 aa17.58■□□□□ 0.4
SBDSP1-202ENST00000423945 CLEC14AQ86T13 490 aa17.58■□□□□ 0.4
SBDSP1-202ENST00000423945 RASGEF1AQ8N9B8 481 aa17.58■□□□□ 0.4
SBDSP1-202ENST00000423945 DDHD1Q8NEL9 900 aa17.58■□□□□ 0.4
SBDSP1-202ENST00000423945 OR4K2Q8NGD2 314 aa17.58■□□□□ 0.4
SBDSP1-202ENST00000423945 OR13C4Q8NGS5 318 aa17.58■□□□□ 0.4
SBDSP1-202ENST00000423945 BRSK1Q8TDC3 778 aa17.58■□□□□ 0.4
SBDSP1-202ENST00000423945 TIMM29Q9BSF4 260 aa17.58■□□□□ 0.4
SBDSP1-202ENST00000423945 SARS2Q9NP81 518 aaKnown RBP17.58■□□□□ 0.4
SBDSP1-202ENST00000423945 SMOXQ9NWM0 555 aa17.58■□□□□ 0.4
SBDSP1-202ENST00000423945 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.58■□□□□ 0.4
SBDSP1-202ENST00000423945 TMEM9Q9P0T7 183 aa17.58■□□□□ 0.4
SBDSP1-202ENST00000423945 PKP3Q9Y446 797 aa17.58■□□□□ 0.4
SBDSP1-202ENST00000423945 IGHV5-10-1A0A0J9YXX1 117 aa17.57■□□□□ 0.4
SBDSP1-202ENST00000423945 TMX2-CTNND1H3BSU7 103 aa17.57■□□□□ 0.4
SBDSP1-202ENST00000423945 AGRPO00253 132 aa17.57■□□□□ 0.4
SBDSP1-202ENST00000423945 ZNF189O75820 626 aaPredicted RBP17.57■□□□□ 0.4
SBDSP1-202ENST00000423945 TNFSF15O95150 251 aa17.57■□□□□ 0.4
SBDSP1-202ENST00000423945 BRAFP15056 766 aa17.57■□□□□ 0.4
SBDSP1-202ENST00000423945 ETV5P41161 510 aa17.57■□□□□ 0.4
SBDSP1-202ENST00000423945 ZNF140P52738 457 aaPredicted RBP17.57■□□□□ 0.4
SBDSP1-202ENST00000423945 PCBP4P57723 403 aaKnown RBP17.57■□□□□ 0.4
SBDSP1-202ENST00000423945 MAP9Q49MG5 647 aa17.57■□□□□ 0.4
SBDSP1-202ENST00000423945 PIM3Q86V86 326 aa17.57■□□□□ 0.4
SBDSP1-202ENST00000423945 FBXO39Q8N4B4 442 aa17.57■□□□□ 0.4
SBDSP1-202ENST00000423945 TAB3Q8N5C8 712 aaPredicted RBP17.57■□□□□ 0.4
SBDSP1-202ENST00000423945 UBE2Q2Q8WVN8 375 aa17.57■□□□□ 0.4
SBDSP1-202ENST00000423945 C1orf54Q8WWF1 131 aa17.57■□□□□ 0.4
SBDSP1-202ENST00000423945 CCDC97Q96F63 343 aaPredicted RBP17.57■□□□□ 0.4
SBDSP1-202ENST00000423945 TLR10Q9BXR5 811 aa17.57■□□□□ 0.4
SBDSP1-202ENST00000423945 THSD1Q9NS62 852 aa17.57■□□□□ 0.4
SBDSP1-202ENST00000423945 DNAJC16Q9Y2G8 782 aa17.57■□□□□ 0.4
SBDSP1-202ENST00000423945 BAHCC1Q9P281 2608 aa17.56■□□□□ 0.4
SBDSP1-202ENST00000423945 C2orf81A6NN90 581 aa17.56■□□□□ 0.4
SBDSP1-202ENST00000423945 LDB2O43679 373 aa17.56■□□□□ 0.4
SBDSP1-202ENST00000423945 PRAMEF1O95521 474 aa17.56■□□□□ 0.4
SBDSP1-202ENST00000423945 ITGA2BP08514 1039 aa17.56■□□□□ 0.4
SBDSP1-202ENST00000423945 ITIH1P19827 911 aa17.56■□□□□ 0.4
SBDSP1-202ENST00000423945 RBMS1P29558 406 aaKnown RBP17.56■□□□□ 0.4
SBDSP1-202ENST00000423945 ABCG1P45844 678 aa17.56■□□□□ 0.4
SBDSP1-202ENST00000423945 UBE2IP63279 158 aaKnown RBP17.56■□□□□ 0.4
SBDSP1-202ENST00000423945 HHEXQ03014 270 aa17.56■□□□□ 0.4
SBDSP1-202ENST00000423945 EIF3IQ13347 325 aaKnown RBP17.56■□□□□ 0.4
SBDSP1-202ENST00000423945 ITGA9Q13797 1035 aa17.56■□□□□ 0.4
SBDSP1-202ENST00000423945 RPS6KA1Q15418 735 aa17.56■□□□□ 0.4
SBDSP1-202ENST00000423945 CLPPQ16740 277 aaPredicted RBP17.56■□□□□ 0.4
SBDSP1-202ENST00000423945 INSCQ1MX18 579 aa17.56■□□□□ 0.4
SBDSP1-202ENST00000423945 LDLRAP1Q5SW96 308 aa17.56■□□□□ 0.4
SBDSP1-202ENST00000423945 PRUNE1Q86TP1 453 aa17.56■□□□□ 0.4
SBDSP1-202ENST00000423945 SPACA3Q8IXA5 215 aa17.56■□□□□ 0.4
SBDSP1-202ENST00000423945 ZNF248Q8NDW4 579 aa17.56■□□□□ 0.4
SBDSP1-202ENST00000423945 GDAP1Q8TB36 358 aa17.56■□□□□ 0.4
SBDSP1-202ENST00000423945 ZNF398Q8TD17 642 aa17.56■□□□□ 0.4
SBDSP1-202ENST00000423945 NAT14Q8WUY8 206 aa17.56■□□□□ 0.4
SBDSP1-202ENST00000423945 NAF1Q96HR8 494 aaKnown RBP17.56■□□□□ 0.4
SBDSP1-202ENST00000423945 PPP1R2P1Q96PQ5 205 aa17.56■□□□□ 0.4
SBDSP1-202ENST00000423945 STRADBQ9C0K7 418 aa17.56■□□□□ 0.4
SBDSP1-202ENST00000423945 OSGEPL1Q9H4B0 414 aa17.56■□□□□ 0.4
SBDSP1-202ENST00000423945 KCNK4Q9NYG8 393 aa17.56■□□□□ 0.4
SBDSP1-202ENST00000423945 ZNF624Q9P2J8 865 aaPredicted RBP17.56■□□□□ 0.4
SBDSP1-202ENST00000423945 LOXL2Q9Y4K0 774 aa17.56■□□□□ 0.4
SBDSP1-202ENST00000423945 IGSF10Q6WRI0 2623 aa17.55■□□□□ 0.4
SBDSP1-202ENST00000423945 KIR2DS5A0A0G2JLQ3 304 aa17.55■□□□□ 0.4
SBDSP1-202ENST00000423945 A0A0G2JNG1 304 aa17.55■□□□□ 0.4
SBDSP1-202ENST00000423945 AGAP14A8MT82 685 aa17.55■□□□□ 0.4
SBDSP1-202ENST00000423945 KIR2DS3K7RE56 304 aa17.55■□□□□ 0.4
SBDSP1-202ENST00000423945 CCL22O00626 93 aa17.55■□□□□ 0.4
SBDSP1-202ENST00000423945 RRP8O43159 456 aaKnown RBP17.55■□□□□ 0.4
SBDSP1-202ENST00000423945 SRP72O76094 671 aaKnown RBP17.55■□□□□ 0.4
SBDSP1-202ENST00000423945 AP2A1O95782 977 aa17.55■□□□□ 0.4
SBDSP1-202ENST00000423945 TPH1P17752 444 aa17.55■□□□□ 0.4
SBDSP1-202ENST00000423945 SLC19A1P41440 591 aa17.55■□□□□ 0.4
SBDSP1-202ENST00000423945 MLLT3P42568 568 aaPredicted RBP17.55■□□□□ 0.4
SBDSP1-202ENST00000423945 LIMK2P53671 638 aa17.55■□□□□ 0.4
SBDSP1-202ENST00000423945 TLE3Q04726 772 aa17.55■□□□□ 0.4
SBDSP1-202ENST00000423945 NFATC2Q13469 925 aa17.55■□□□□ 0.4
SBDSP1-202ENST00000423945 BIRC2Q13490 618 aa17.55■□□□□ 0.4
SBDSP1-202ENST00000423945 KIR2DS5Q14953 304 aa17.55■□□□□ 0.4
SBDSP1-202ENST00000423945 P3H1Q32P28 736 aa17.55■□□□□ 0.4
SBDSP1-202ENST00000423945 PHF19Q5T6S3 580 aa17.55■□□□□ 0.4
SBDSP1-202ENST00000423945 XKR5Q6UX68 686 aa17.55■□□□□ 0.4
SBDSP1-202ENST00000423945 PDZD3Q86UT5 571 aa17.55■□□□□ 0.4
SBDSP1-202ENST00000423945 TRAPPC5Q8IUR0 188 aa17.55■□□□□ 0.4
SBDSP1-202ENST00000423945 GLIS1Q8NBF1 620 aa17.55■□□□□ 0.4
SBDSP1-202ENST00000423945 RCBTB1Q8NDN9 531 aa17.55■□□□□ 0.4
SBDSP1-202ENST00000423945 CCDC74BQ96LY2 380 aa17.55■□□□□ 0.4
SBDSP1-202ENST00000423945 LRRC40Q9H9A6 602 aa17.55■□□□□ 0.4
SBDSP1-202ENST00000423945 PIH1D1Q9NWS0 290 aaKnown RBP17.55■□□□□ 0.4
SBDSP1-202ENST00000423945 CPNE7Q9UBL6 633 aa17.55■□□□□ 0.4
SBDSP1-202ENST00000423945 PISDQ9UG56 409 aa17.55■□□□□ 0.4
SBDSP1-202ENST00000423945 PPP2R2CQ9Y2T4 447 aa17.55■□□□□ 0.4
SBDSP1-202ENST00000423945 AHCTF1Q8WYP5 2266 aa17.54■□□□□ 0.4
SBDSP1-202ENST00000423945 PRAMEF33A0A0G2JMD5 474 aa17.54■□□□□ 0.4
SBDSP1-202ENST00000423945 OR5K4A6NMS3 321 aa17.54■□□□□ 0.4
SBDSP1-202ENST00000423945 SGTAO43765 313 aa17.54■□□□□ 0.4
SBDSP1-202ENST00000423945 CRTAMO95727 393 aa17.54■□□□□ 0.4
SBDSP1-202ENST00000423945 THRAP10827 490 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms