RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 ITKQ08881 620 aa16.45■□□□□ 0.22
CHCHD3-202ENST00000423635 ANKRD20A8PQ5CZ79 823 aa16.45■□□□□ 0.22
CHCHD3-202ENST00000423635 WASH2PQ6VEQ5 465 aa16.45■□□□□ 0.22
CHCHD3-202ENST00000423635 FAM92BQ6ZTR7 304 aa16.45■□□□□ 0.22
CHCHD3-202ENST00000423635 ADGRG6Q86SQ4 1221 aa16.45■□□□□ 0.22
CHCHD3-202ENST00000423635 RHOT1Q8IXI2 618 aa16.45■□□□□ 0.22
CHCHD3-202ENST00000423635 RBMXL3Q8N7X1 1067 aaKnown RBP16.45■□□□□ 0.22
CHCHD3-202ENST00000423635 ENOX1Q8TC92 643 aaKnown RBP16.45■□□□□ 0.22
CHCHD3-202ENST00000423635 ADAMTS17Q8TE56 1095 aa16.45■□□□□ 0.22
CHCHD3-202ENST00000423635 UBXN4Q92575 508 aa16.45■□□□□ 0.22
CHCHD3-202ENST00000423635 OR2AG1Q9H205 316 aa16.45■□□□□ 0.22
CHCHD3-202ENST00000423635 WASH6PQ9NQA3 447 aa16.45■□□□□ 0.22
CHCHD3-202ENST00000423635 PKD2L2Q9NZM6 624 aa16.45■□□□□ 0.22
CHCHD3-202ENST00000423635 SLC5A6Q9Y289 635 aa16.45■□□□□ 0.22
CHCHD3-202ENST00000423635 IGHV5-51A0A0C4DH38 117 aa16.44■□□□□ 0.22
CHCHD3-202ENST00000423635 C1orf232A0A0U1RR37 186 aa16.44■□□□□ 0.22
CHCHD3-202ENST00000423635 SSU72P8A0A1W2PR75 194 aa16.44■□□□□ 0.22
CHCHD3-202ENST00000423635 ATMINO43313 823 aaPredicted RBP16.44■□□□□ 0.22
CHCHD3-202ENST00000423635 CCDC172P0C7W6 258 aa16.44■□□□□ 0.22
CHCHD3-202ENST00000423635 FERP16591 822 aa16.44■□□□□ 0.22
CHCHD3-202ENST00000423635 ACY1Q03154 408 aa16.44■□□□□ 0.22
CHCHD3-202ENST00000423635 TUBB3Q13509 450 aa16.44■□□□□ 0.22
CHCHD3-202ENST00000423635 GPR18Q14330 331 aa16.44■□□□□ 0.22
CHCHD3-202ENST00000423635 AGAP9Q5VTM2 703 aa16.44■□□□□ 0.22
CHCHD3-202ENST00000423635 IZUMO3Q5VZ72 239 aa16.44■□□□□ 0.22
CHCHD3-202ENST00000423635 SLC6A19Q695T7 634 aa16.44■□□□□ 0.22
CHCHD3-202ENST00000423635 IRGCQ6NXR0 463 aa16.44■□□□□ 0.22
CHCHD3-202ENST00000423635 IRF2BP2Q7Z5L9 587 aa16.44■□□□□ 0.22
CHCHD3-202ENST00000423635 SLC34A3Q8N130 599 aa16.44■□□□□ 0.22
CHCHD3-202ENST00000423635 SIDT2Q8NBJ9 832 aaKnown RBP16.44■□□□□ 0.22
CHCHD3-202ENST00000423635 FDCSPQ8NFU4 85 aa16.44■□□□□ 0.22
CHCHD3-202ENST00000423635 ARRDC2Q8TBH0 407 aa16.44■□□□□ 0.22
CHCHD3-202ENST00000423635 CCHCR1Q8TD31 782 aa16.44■□□□□ 0.22
CHCHD3-202ENST00000423635 MAML1Q92585 1016 aa16.44■□□□□ 0.22
CHCHD3-202ENST00000423635 CLSTN2Q9H4D0 955 aa16.44■□□□□ 0.22
CHCHD3-202ENST00000423635 PCDH9Q9HC56 1237 aa16.44■□□□□ 0.22
CHCHD3-202ENST00000423635 AMACRQ9UHK6 382 aa16.44■□□□□ 0.22
CHCHD3-202ENST00000423635 TMCO5BA8MYB1 307 aa16.43■□□□□ 0.22
CHCHD3-202ENST00000423635 KMOO15229 486 aa16.43■□□□□ 0.22
CHCHD3-202ENST00000423635 MTA2O94776 668 aa16.43■□□□□ 0.22
CHCHD3-202ENST00000423635 SLC25A14O95258 325 aaPredicted RBP16.43■□□□□ 0.22
CHCHD3-202ENST00000423635 JCHAINP01591 159 aa16.43■□□□□ 0.22
CHCHD3-202ENST00000423635 ZNF7P17097 686 aaPredicted RBP16.43■□□□□ 0.22
CHCHD3-202ENST00000423635 CA4P22748 312 aa16.43■□□□□ 0.22
CHCHD3-202ENST00000423635 PTGIRP43119 386 aa16.43■□□□□ 0.22
CHCHD3-202ENST00000423635 PDE1BQ01064 536 aa16.43■□□□□ 0.22
CHCHD3-202ENST00000423635 DSC2Q02487 901 aa16.43■□□□□ 0.22
CHCHD3-202ENST00000423635 BECN1Q14457 450 aa16.43■□□□□ 0.22
CHCHD3-202ENST00000423635 ZNF648Q5T619 568 aaPredicted RBP16.43■□□□□ 0.22
CHCHD3-202ENST00000423635 GLIS1Q8NBF1 620 aa16.43■□□□□ 0.22
CHCHD3-202ENST00000423635 C19orf60Q96EN9 201 aa16.43■□□□□ 0.22
CHCHD3-202ENST00000423635 PCMTD1Q96MG8 357 aaPredicted RBP16.43■□□□□ 0.22
CHCHD3-202ENST00000423635 SMAD5Q99717 465 aaKnown RBP16.43■□□□□ 0.22
CHCHD3-202ENST00000423635 TIMM29Q9BSF4 260 aa16.43■□□□□ 0.22
CHCHD3-202ENST00000423635 NUDT9Q9BW91 350 aa16.43■□□□□ 0.22
CHCHD3-202ENST00000423635 MFRPQ9BY79 579 aa16.43■□□□□ 0.22
CHCHD3-202ENST00000423635 LUZP4Q9P127 313 aa16.43■□□□□ 0.22
CHCHD3-202ENST00000423635 PDZK1P1A8MUH7 402 aa16.42■□□□□ 0.22
CHCHD3-202ENST00000423635 ANKRD66B4E2M5 251 aa16.42■□□□□ 0.22
CHCHD3-202ENST00000423635 MATN3O15232 486 aa16.42■□□□□ 0.22
CHCHD3-202ENST00000423635 TMEM63AO94886 807 aa16.42■□□□□ 0.22
CHCHD3-202ENST00000423635 KCNAB1Q14722 419 aa16.42■□□□□ 0.22
CHCHD3-202ENST00000423635 NR6A1Q15406 480 aa16.42■□□□□ 0.22
CHCHD3-202ENST00000423635 QPCTQ16769 361 aa16.42■□□□□ 0.22
CHCHD3-202ENST00000423635 INSCQ1MX18 579 aa16.42■□□□□ 0.22
CHCHD3-202ENST00000423635 SMTNL2Q2TAL5 461 aa16.42■□□□□ 0.22
CHCHD3-202ENST00000423635 TDRD12Q587J7 1177 aaKnown RBP16.42■□□□□ 0.22
CHCHD3-202ENST00000423635 ZRANB3Q5FWF4 1079 aa16.42■□□□□ 0.22
CHCHD3-202ENST00000423635 LRRTM4Q86VH4 590 aa16.42■□□□□ 0.22
CHCHD3-202ENST00000423635 KMT5CQ86Y97 462 aa16.42■□□□□ 0.22
CHCHD3-202ENST00000423635 TTC13Q8NBP0 860 aa16.42■□□□□ 0.22
CHCHD3-202ENST00000423635 LPCAT1Q8NF37 534 aa16.42■□□□□ 0.22
CHCHD3-202ENST00000423635 FATE1Q969F0 183 aa16.42■□□□□ 0.22
CHCHD3-202ENST00000423635 EID2BQ96D98 161 aa16.42■□□□□ 0.22
CHCHD3-202ENST00000423635 SNRNP40Q96DI7 357 aaKnown RBP16.42■□□□□ 0.22
CHCHD3-202ENST00000423635 ZNF514Q96K75 400 aaPredicted RBP16.42■□□□□ 0.22
CHCHD3-202ENST00000423635 C5orf34Q96MH7 638 aa16.42■□□□□ 0.22
CHCHD3-202ENST00000423635 LRFN5Q96NI6 719 aa16.42■□□□□ 0.22
CHCHD3-202ENST00000423635 MLPHQ9BV36 600 aaPredicted RBP16.42■□□□□ 0.22
CHCHD3-202ENST00000423635 ARFGAP3Q9NP61 516 aa16.42■□□□□ 0.22
CHCHD3-202ENST00000423635 FGF21Q9NSA1 209 aa16.42■□□□□ 0.22
CHCHD3-202ENST00000423635 DTLQ9NZJ0 730 aa16.42■□□□□ 0.22
CHCHD3-202ENST00000423635 G3BP2Q9UN86 482 aaKnown RBP16.42■□□□□ 0.22
CHCHD3-202ENST00000423635 OR52A4PA6NMU1 304 aa16.41■□□□□ 0.22
CHCHD3-202ENST00000423635 CPNE3O75131 537 aaKnown RBP16.41■□□□□ 0.22
CHCHD3-202ENST00000423635 RAB40ALP0C0E4 278 aa16.41■□□□□ 0.22
CHCHD3-202ENST00000423635 RARAP10276 462 aa16.41■□□□□ 0.22
CHCHD3-202ENST00000423635 IDSP22304 550 aa16.41■□□□□ 0.22
CHCHD3-202ENST00000423635 IL4RP24394 825 aa16.41■□□□□ 0.22
CHCHD3-202ENST00000423635 RPL10P27635 214 aaKnown RBP16.41■□□□□ 0.22
CHCHD3-202ENST00000423635 ZNF165P49910 485 aa16.41■□□□□ 0.22
CHCHD3-202ENST00000423635 PPP1CAP62136 330 aa16.41■□□□□ 0.22
CHCHD3-202ENST00000423635 NIPAL4Q0D2K0 466 aa16.41■□□□□ 0.22
CHCHD3-202ENST00000423635 SEPT7Q16181 437 aaKnown RBP16.41■□□□□ 0.22
CHCHD3-202ENST00000423635 ZNF569Q5MCW4 686 aa16.41■□□□□ 0.22
CHCHD3-202ENST00000423635 PDPK2PQ6A1A2 396 aa16.41■□□□□ 0.22
CHCHD3-202ENST00000423635 TIGD7Q6NT04 549 aaPredicted RBP16.41■□□□□ 0.22
CHCHD3-202ENST00000423635 CRTC3Q6UUV7 619 aa16.41■□□□□ 0.22
CHCHD3-202ENST00000423635 MED25Q71SY5 747 aa16.41■□□□□ 0.22
CHCHD3-202ENST00000423635 ZNF547Q8IVP9 402 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms