RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 RBFAQ8N0V3 343 aa17.33■□□□□ 0.37
LINC00271-201ENST00000421378 OXR1Q8N573 874 aa17.33■□□□□ 0.37
LINC00271-201ENST00000421378 SCG3Q8WXD2 468 aaKnown RBP17.33■□□□□ 0.37
LINC00271-201ENST00000421378 OR1E3Q8WZA6 343 aa17.33■□□□□ 0.37
LINC00271-201ENST00000421378 TSACCQ96A04 125 aaPredicted RBP17.33■□□□□ 0.37
LINC00271-201ENST00000421378 CCDC97Q96F63 343 aaPredicted RBP17.33■□□□□ 0.37
LINC00271-201ENST00000421378 TCF12Q99081 682 aa17.33■□□□□ 0.37
LINC00271-201ENST00000421378 PHOX2BQ99453 314 aa17.33■□□□□ 0.37
LINC00271-201ENST00000421378 RMI1Q9H9A7 625 aa17.33■□□□□ 0.37
LINC00271-201ENST00000421378 CYP4F12Q9HCS2 524 aa17.33■□□□□ 0.37
LINC00271-201ENST00000421378 PNMA8BQ9ULN7 279 aaPredicted RBP17.33■□□□□ 0.37
LINC00271-201ENST00000421378 SUFUQ9UMX1 484 aa17.33■□□□□ 0.37
LINC00271-201ENST00000421378 VPS9D1Q9Y2B5 631 aa17.33■□□□□ 0.37
LINC00271-201ENST00000421378 DGKBQ9Y6T7 804 aa17.33■□□□□ 0.37
LINC00271-201ENST00000421378 RALGAPA1Q6GYQ0 2036 aa17.33■□□□□ 0.36
LINC00271-201ENST00000421378 WDR87Q6ZQQ6 2873 aa17.33■□□□□ 0.36
LINC00271-201ENST00000421378 LRP4O75096 1905 aa17.32■□□□□ 0.36
LINC00271-201ENST00000421378 DNAJC6O75061 913 aa17.32■□□□□ 0.36
LINC00271-201ENST00000421378 RASGRP1O95267 797 aa17.32■□□□□ 0.36
LINC00271-201ENST00000421378 CSF2P04141 144 aa17.32■□□□□ 0.36
LINC00271-201ENST00000421378 IVLP07476 585 aa17.32■□□□□ 0.36
LINC00271-201ENST00000421378 NME1P15531 152 aaKnown RBP17.32■□□□□ 0.36
LINC00271-201ENST00000421378 ZNF7P17097 686 aaPredicted RBP17.32■□□□□ 0.36
LINC00271-201ENST00000421378 BLKP51451 505 aa17.32■□□□□ 0.36
LINC00271-201ENST00000421378 HK3P52790 923 aa17.32■□□□□ 0.36
LINC00271-201ENST00000421378 CTBP1Q13363 440 aa17.32■□□□□ 0.36
LINC00271-201ENST00000421378 TRMT10CQ7L0Y3 403 aaKnown RBP17.32■□□□□ 0.36
LINC00271-201ENST00000421378 DET1Q7L5Y6 550 aa17.32■□□□□ 0.36
LINC00271-201ENST00000421378 TRAPPC5Q8IUR0 188 aa17.32■□□□□ 0.36
LINC00271-201ENST00000421378 HID1Q8IV36 788 aa17.32■□□□□ 0.36
LINC00271-201ENST00000421378 RASGEF1AQ8N9B8 481 aa17.32■□□□□ 0.36
LINC00271-201ENST00000421378 CDKL2Q92772 493 aa17.32■□□□□ 0.36
LINC00271-201ENST00000421378 SCARF2Q96GP6 870 aaPredicted RBP17.32■□□□□ 0.36
LINC00271-201ENST00000421378 ELF4Q99607 663 aaPredicted RBP17.32■□□□□ 0.36
LINC00271-201ENST00000421378 TXLNGYQ9BZA5 131 aa17.32■□□□□ 0.36
LINC00271-201ENST00000421378 CARS2Q9HA77 564 aaKnown RBP17.32■□□□□ 0.36
LINC00271-201ENST00000421378 SEMA4GQ9NTN9 838 aa17.32■□□□□ 0.36
LINC00271-201ENST00000421378 FBXO5Q9UKT4 447 aa17.32■□□□□ 0.36
LINC00271-201ENST00000421378 OTOGLQ3ZCN5 2332 aa17.32■□□□□ 0.36
LINC00271-201ENST00000421378 TMEM131Q92545 1883 aa17.32■□□□□ 0.36
LINC00271-201ENST00000421378 KNL1Q8NG31 2342 aa17.32■□□□□ 0.36
LINC00271-201ENST00000421378 LNP1A1A4G5 178 aa17.32■□□□□ 0.36
LINC00271-201ENST00000421378 OR2AG2A6NM03 316 aa17.32■□□□□ 0.36
LINC00271-201ENST00000421378 CHUKO15111 745 aa17.32■□□□□ 0.36
LINC00271-201ENST00000421378 OR1I1O60431 355 aa17.32■□□□□ 0.36
LINC00271-201ENST00000421378 CER1O95813 267 aa17.32■□□□□ 0.36
LINC00271-201ENST00000421378 FUCA1P04066 466 aa17.32■□□□□ 0.36
LINC00271-201ENST00000421378 ATP1B2P14415 290 aaPredicted RBP17.32■□□□□ 0.36
LINC00271-201ENST00000421378 JUNDP17535 347 aa17.32■□□□□ 0.36
LINC00271-201ENST00000421378 ENGP17813 658 aa17.32■□□□□ 0.36
LINC00271-201ENST00000421378 GNPDA1P46926 289 aa17.32■□□□□ 0.36
LINC00271-201ENST00000421378 ARRB1P49407 418 aaPredicted RBP17.32■□□□□ 0.36
LINC00271-201ENST00000421378 HLA-BQ31612 363 aa17.32■□□□□ 0.36
LINC00271-201ENST00000421378 PRAMEF14Q5SWL7 426 aa17.32■□□□□ 0.36
LINC00271-201ENST00000421378 TEDDM1Q5T9Z0 273 aa17.32■□□□□ 0.36
LINC00271-201ENST00000421378 EMBQ6PCB8 327 aa17.32■□□□□ 0.36
LINC00271-201ENST00000421378 KIAA0408Q6ZU52 694 aa17.32■□□□□ 0.36
LINC00271-201ENST00000421378 GALNT13Q8IUC8 556 aa17.32■□□□□ 0.36
LINC00271-201ENST00000421378 PHACTR4Q8IZ21 702 aa17.32■□□□□ 0.36
LINC00271-201ENST00000421378 CLDN19Q8N6F1 224 aa17.32■□□□□ 0.36
LINC00271-201ENST00000421378 C2CD4AQ8NCU7 369 aaPredicted RBP17.32■□□□□ 0.36
LINC00271-201ENST00000421378 FBF1Q8TES7 1133 aa17.32■□□□□ 0.36
LINC00271-201ENST00000421378 SGF29Q96ES7 293 aa17.32■□□□□ 0.36
LINC00271-201ENST00000421378 ZNF514Q96K75 400 aaPredicted RBP17.32■□□□□ 0.36
LINC00271-201ENST00000421378 GTPBP2Q9BX10 602 aaKnown RBP17.32■□□□□ 0.36
LINC00271-201ENST00000421378 SLC13A1Q9BZW2 595 aa17.32■□□□□ 0.36
LINC00271-201ENST00000421378 INTS10Q9NVR2 710 aaKnown RBP17.32■□□□□ 0.36
LINC00271-201ENST00000421378 SLC17A6Q9P2U8 582 aa17.32■□□□□ 0.36
LINC00271-201ENST00000421378 APOBEC3BQ9UH17 382 aaKnown RBP17.32■□□□□ 0.36
LINC00271-201ENST00000421378 ZNHIT2Q9UHR6 403 aa17.32■□□□□ 0.36
LINC00271-201ENST00000421378 KLF15Q9UIH9 416 aa17.32■□□□□ 0.36
LINC00271-201ENST00000421378 ADAMTS9Q9P2N4 1935 aa17.31■□□□□ 0.36
LINC00271-201ENST00000421378 UBA6A0AVT1 1052 aaPredicted RBP17.31■□□□□ 0.36
LINC00271-201ENST00000421378 H3BM21 787 aa17.31■□□□□ 0.36
LINC00271-201ENST00000421378 PRMT5O14744 637 aaPredicted RBP17.31■□□□□ 0.36
LINC00271-201ENST00000421378 GRID2O43424 1007 aa17.31■□□□□ 0.36
LINC00271-201ENST00000421378 TNFP01375 233 aa17.31■□□□□ 0.36
LINC00271-201ENST00000421378 CTSCP53634 463 aa17.31■□□□□ 0.36
LINC00271-201ENST00000421378 ATXN3P54252 364 aaPredicted RBP17.31■□□□□ 0.36
LINC00271-201ENST00000421378 MPP1Q00013 466 aa17.31■□□□□ 0.36
LINC00271-201ENST00000421378 SF3A2Q15428 464 aaKnown RBP17.31■□□□□ 0.36
LINC00271-201ENST00000421378 CSRP2Q16527 193 aa17.31■□□□□ 0.36
LINC00271-201ENST00000421378 UBAP2Q5T6F2 1119 aaKnown RBP17.31■□□□□ 0.36
LINC00271-201ENST00000421378 CRTC3Q6UUV7 619 aa17.31■□□□□ 0.36
LINC00271-201ENST00000421378 LRRTM4Q86VH4 590 aa17.31■□□□□ 0.36
LINC00271-201ENST00000421378 AENQ8WTP8 325 aaKnown RBP17.31■□□□□ 0.36
LINC00271-201ENST00000421378 NAT14Q8WUY8 206 aa17.31■□□□□ 0.36
LINC00271-201ENST00000421378 LPGAT1Q92604 370 aa17.31■□□□□ 0.36
LINC00271-201ENST00000421378 CLPBQ9H078 707 aa17.31■□□□□ 0.36
LINC00271-201ENST00000421378 GAREM1Q9H706 876 aa17.31■□□□□ 0.36
LINC00271-201ENST00000421378 FBXO6Q9NRD1 293 aaPredicted RBP17.31■□□□□ 0.36
LINC00271-201ENST00000421378 GPR34Q9UPC5 381 aa17.31■□□□□ 0.36
LINC00271-201ENST00000421378 PRKAB1Q9Y478 270 aa17.31■□□□□ 0.36
LINC00271-201ENST00000421378 PCYT1BQ9Y5K3 369 aaPredicted RBP17.31■□□□□ 0.36
LINC00271-201ENST00000421378 FAM159BA6NKW6 160 aa17.3■□□□□ 0.36
LINC00271-201ENST00000421378 SCAMP1O15126 338 aa17.3■□□□□ 0.36
LINC00271-201ENST00000421378 RIPK2O43353 540 aa17.3■□□□□ 0.36
LINC00271-201ENST00000421378 DFNA5O60443 496 aa17.3■□□□□ 0.36
LINC00271-201ENST00000421378 PIAS1O75925 651 aa17.3■□□□□ 0.36
LINC00271-201ENST00000421378 S1PR4O95977 384 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms