RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 ASB18Q6ZVZ8 466 aa16.59■□□□□ 0.25
UPF3AP3-201ENST00000420996 LRRTM4Q86VH4 590 aa16.59■□□□□ 0.25
UPF3AP3-201ENST00000420996 RBM12BQ8IXT5 1001 aaKnown RBP16.59■□□□□ 0.25
UPF3AP3-201ENST00000420996 TRAM1L1Q8N609 369 aa16.59■□□□□ 0.25
UPF3AP3-201ENST00000420996 PQLC3Q8N755 202 aa16.59■□□□□ 0.25
UPF3AP3-201ENST00000420996 CNTD1Q8N815 330 aa16.59■□□□□ 0.25
UPF3AP3-201ENST00000420996 KLHL6Q8WZ60 621 aa16.59■□□□□ 0.25
UPF3AP3-201ENST00000420996 RNF31Q96EP0 1072 aa16.59■□□□□ 0.25
UPF3AP3-201ENST00000420996 MAGEE1Q9HCI5 957 aa16.59■□□□□ 0.25
UPF3AP3-201ENST00000420996 WASH6PQ9NQA3 447 aa16.59■□□□□ 0.25
UPF3AP3-201ENST00000420996 POT1Q9NUX5 634 aa16.59■□□□□ 0.25
UPF3AP3-201ENST00000420996 EPHA6Q9UF33 1036 aa16.59■□□□□ 0.25
UPF3AP3-201ENST00000420996 DNAJC16Q9Y2G8 782 aa16.59■□□□□ 0.25
UPF3AP3-201ENST00000420996 PIPSLA2A3N6 862 aa16.58■□□□□ 0.24
UPF3AP3-201ENST00000420996 PDZK1P1A8MUH7 402 aa16.58■□□□□ 0.24
UPF3AP3-201ENST00000420996 KCNK1O00180 336 aa16.58■□□□□ 0.24
UPF3AP3-201ENST00000420996 VEGFDO43915 354 aa16.58■□□□□ 0.24
UPF3AP3-201ENST00000420996 CREG1O75629 220 aa16.58■□□□□ 0.24
UPF3AP3-201ENST00000420996 MT-ND3P03897 115 aa16.58■□□□□ 0.24
UPF3AP3-201ENST00000420996 SERPING1P05155 500 aa16.58■□□□□ 0.24
UPF3AP3-201ENST00000420996 BRAFP15056 766 aa16.58■□□□□ 0.24
UPF3AP3-201ENST00000420996 CAPZBP47756 277 aa16.58■□□□□ 0.24
UPF3AP3-201ENST00000420996 PMS2P54278 862 aa16.58■□□□□ 0.24
UPF3AP3-201ENST00000420996 MLLT10P55197 1068 aa16.58■□□□□ 0.24
UPF3AP3-201ENST00000420996 IFI35P80217 286 aaPredicted RBP16.58■□□□□ 0.24
UPF3AP3-201ENST00000420996 PPIDQ08752 370 aaKnown RBP16.58■□□□□ 0.24
UPF3AP3-201ENST00000420996 PLA2G4EQ3MJ16 856 aa16.58■□□□□ 0.24
UPF3AP3-201ENST00000420996 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.58■□□□□ 0.24
UPF3AP3-201ENST00000420996 AGAP9Q5VTM2 703 aa16.58■□□□□ 0.24
UPF3AP3-201ENST00000420996 CACHD1Q5VU97 1274 aa16.58■□□□□ 0.24
UPF3AP3-201ENST00000420996 ALKBH5Q6P6C2 394 aaKnown RBP16.58■□□□□ 0.24
UPF3AP3-201ENST00000420996 CYB5D1Q6P9G0 228 aa16.58■□□□□ 0.24
UPF3AP3-201ENST00000420996 TMC3Q7Z5M5 1100 aa16.58■□□□□ 0.24
UPF3AP3-201ENST00000420996 CPNE8Q86YQ8 564 aa16.58■□□□□ 0.24
UPF3AP3-201ENST00000420996 RSC1A1Q92681 617 aa16.58■□□□□ 0.24
UPF3AP3-201ENST00000420996 ZDHHC12Q96GR4 267 aa16.58■□□□□ 0.24
UPF3AP3-201ENST00000420996 ELMO2Q96JJ3 720 aa16.58■□□□□ 0.24
UPF3AP3-201ENST00000420996 TRIB3Q96RU7 358 aa16.58■□□□□ 0.24
UPF3AP3-201ENST00000420996 RAB33BQ9H082 229 aa16.58■□□□□ 0.24
UPF3AP3-201ENST00000420996 SLC40A1Q9NP59 571 aa16.58■□□□□ 0.24
UPF3AP3-201ENST00000420996 LNPEPQ9UIQ6 1025 aa16.58■□□□□ 0.24
UPF3AP3-201ENST00000420996 TLK1Q9UKI8 766 aa16.58■□□□□ 0.24
UPF3AP3-201ENST00000420996 SHOC2Q9UQ13 582 aa16.58■□□□□ 0.24
UPF3AP3-201ENST00000420996 A0A1W2PQJ5 194 aa16.57■□□□□ 0.24
UPF3AP3-201ENST00000420996 BLACEA4D250 179 aa16.57■□□□□ 0.24
UPF3AP3-201ENST00000420996 CDC14CA4D256 554 aa16.57■□□□□ 0.24
UPF3AP3-201ENST00000420996 GOLGA6L22H0YM25 854 aa16.57■□□□□ 0.24
UPF3AP3-201ENST00000420996 KIF1CO43896 1103 aaKnown RBP16.57■□□□□ 0.24
UPF3AP3-201ENST00000420996 PROSCO94903 275 aa16.57■□□□□ 0.24
UPF3AP3-201ENST00000420996 CDK14O94921 469 aa16.57■□□□□ 0.24
UPF3AP3-201ENST00000420996 MBD3O95983 291 aa16.57■□□□□ 0.24
UPF3AP3-201ENST00000420996 KRT7P08729 469 aa16.57■□□□□ 0.24
UPF3AP3-201ENST00000420996 NELFEP18615 380 aaKnown RBP16.57■□□□□ 0.24
UPF3AP3-201ENST00000420996 IDSP22304 550 aa16.57■□□□□ 0.24
UPF3AP3-201ENST00000420996 RPL10P27635 214 aaKnown RBP16.57■□□□□ 0.24
UPF3AP3-201ENST00000420996 TAS2R40P59535 323 aa16.57■□□□□ 0.24
UPF3AP3-201ENST00000420996 DNASE1L3Q13609 305 aa16.57■□□□□ 0.24
UPF3AP3-201ENST00000420996 GPR18Q14330 331 aa16.57■□□□□ 0.24
UPF3AP3-201ENST00000420996 NFKBIBQ15653 356 aa16.57■□□□□ 0.24
UPF3AP3-201ENST00000420996 SEPT7Q16181 437 aaKnown RBP16.57■□□□□ 0.24
UPF3AP3-201ENST00000420996 TMEM135Q86UB9 458 aa16.57■□□□□ 0.24
UPF3AP3-201ENST00000420996 PPP1R3BQ86XI6 285 aa16.57■□□□□ 0.24
UPF3AP3-201ENST00000420996 ZNF547Q8IVP9 402 aa16.57■□□□□ 0.24
UPF3AP3-201ENST00000420996 APLFQ8IW19 511 aaPredicted RBP16.57■□□□□ 0.24
UPF3AP3-201ENST00000420996 CXorf40BQ96DE9 158 aa16.57■□□□□ 0.24
UPF3AP3-201ENST00000420996 ZNF830Q96NB3 372 aaPredicted RBP16.57■□□□□ 0.24
UPF3AP3-201ENST00000420996 GPR63Q9BZJ6 419 aa16.57■□□□□ 0.24
UPF3AP3-201ENST00000420996 TWSG1Q9GZX9 223 aa16.57■□□□□ 0.24
UPF3AP3-201ENST00000420996 LRRC4CQ9HCJ2 640 aa16.57■□□□□ 0.24
UPF3AP3-201ENST00000420996 ZNF711Q9Y462 761 aa16.57■□□□□ 0.24
UPF3AP3-201ENST00000420996 OR52A4PA6NMU1 304 aa16.56■□□□□ 0.24
UPF3AP3-201ENST00000420996 C21orf140B9A014 251 aa16.56■□□□□ 0.24
UPF3AP3-201ENST00000420996 SERPINC1P01008 464 aa16.56■□□□□ 0.24
UPF3AP3-201ENST00000420996 PIRTP0C851 137 aa16.56■□□□□ 0.24
UPF3AP3-201ENST00000420996 ZBTB17Q13105 803 aa16.56■□□□□ 0.24
UPF3AP3-201ENST00000420996 IRGCQ6NXR0 463 aa16.56■□□□□ 0.24
UPF3AP3-201ENST00000420996 FAM92BQ6ZTR7 304 aa16.56■□□□□ 0.24
UPF3AP3-201ENST00000420996 NT5DC3Q86UY8 548 aa16.56■□□□□ 0.24
UPF3AP3-201ENST00000420996 CT55Q8WUE5 264 aa16.56■□□□□ 0.24
UPF3AP3-201ENST00000420996 IMP4Q96G21 291 aaKnown RBP16.56■□□□□ 0.24
UPF3AP3-201ENST00000420996 FCRL4Q96PJ5 515 aa16.56■□□□□ 0.24
UPF3AP3-201ENST00000420996 RNF157Q96PX1 679 aa16.56■□□□□ 0.24
UPF3AP3-201ENST00000420996 XPO4Q9C0E2 1151 aaKnown RBP16.56■□□□□ 0.24
UPF3AP3-201ENST00000420996 PDE7BQ9NP56 450 aa16.56■□□□□ 0.24
UPF3AP3-201ENST00000420996 LHX9Q9NQ69 397 aa16.56■□□□□ 0.24
UPF3AP3-201ENST00000420996 SEMA5BQ9P283 1151 aa16.56■□□□□ 0.24
UPF3AP3-201ENST00000420996 USP9YO00507 2555 aaPredicted RBP16.55■□□□□ 0.24
UPF3AP3-201ENST00000420996 MTX2O75431 263 aa16.55■□□□□ 0.24
UPF3AP3-201ENST00000420996 BPIP17213 487 aa16.55■□□□□ 0.24
UPF3AP3-201ENST00000420996 VCLP18206 1134 aa16.55■□□□□ 0.24
UPF3AP3-201ENST00000420996 CASP14P31944 242 aa16.55■□□□□ 0.24
UPF3AP3-201ENST00000420996 DRG2P55039 364 aaKnown RBP16.55■□□□□ 0.24
UPF3AP3-201ENST00000420996 CDK18Q07002 472 aa16.55■□□□□ 0.24
UPF3AP3-201ENST00000420996 SEMA5AQ13591 1074 aa16.55■□□□□ 0.24
UPF3AP3-201ENST00000420996 KHDC1Q4VXA5 237 aaKnown RBP16.55■□□□□ 0.24
UPF3AP3-201ENST00000420996 C4orf17Q53FE4 359 aa16.55■□□□□ 0.24
UPF3AP3-201ENST00000420996 ZFYVE27Q5T4F4 411 aa16.55■□□□□ 0.24
UPF3AP3-201ENST00000420996 C11orf96Q7Z7L8 435 aa16.55■□□□□ 0.24
UPF3AP3-201ENST00000420996 SEC14L1Q92503 715 aa16.55■□□□□ 0.24
UPF3AP3-201ENST00000420996 TADA1Q96BN2 335 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms