RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 WISP1O95388 367 aa17.1■□□□□ 0.33
MSH6-203ENST00000420813 VIPP01282 170 aa17.1■□□□□ 0.33
MSH6-203ENST00000420813 COMTP21964 271 aa17.1■□□□□ 0.33
MSH6-203ENST00000420813 HMGCLP35914 325 aa17.1■□□□□ 0.33
MSH6-203ENST00000420813 SLC19A1P41440 591 aa17.1■□□□□ 0.33
MSH6-203ENST00000420813 CDKN2BP42772 138 aa17.1■□□□□ 0.33
MSH6-203ENST00000420813 NOP2P46087 812 aaKnown RBP17.1■□□□□ 0.33
MSH6-203ENST00000420813 ABHD18Q0P651 414 aa17.1■□□□□ 0.33
MSH6-203ENST00000420813 CLCA4Q14CN2 919 aa17.1■□□□□ 0.33
MSH6-203ENST00000420813 FAM182AQ5T1J6 154 aa17.1■□□□□ 0.33
MSH6-203ENST00000420813 ABRAXAS1Q6UWZ7 409 aa17.1■□□□□ 0.33
MSH6-203ENST00000420813 WASH2PQ6VEQ5 465 aa17.1■□□□□ 0.33
MSH6-203ENST00000420813 ATG14Q6ZNE5 492 aa17.1■□□□□ 0.33
MSH6-203ENST00000420813 CNGA4Q8IV77 575 aa17.1■□□□□ 0.33
MSH6-203ENST00000420813 TRIM48Q8IWZ4 208 aa17.1■□□□□ 0.33
MSH6-203ENST00000420813 DTX3LQ8TDB6 740 aa17.1■□□□□ 0.33
MSH6-203ENST00000420813 TFB1MQ8WVM0 346 aaKnown RBP17.1■□□□□ 0.33
MSH6-203ENST00000420813 C9orf72Q96LT7 481 aa17.1■□□□□ 0.33
MSH6-203ENST00000420813 SLC25A18Q9H1K4 315 aa17.1■□□□□ 0.33
MSH6-203ENST00000420813 TRABDQ9H4I3 376 aa17.1■□□□□ 0.33
MSH6-203ENST00000420813 GPN2Q9H9Y4 310 aaPredicted RBP17.1■□□□□ 0.33
MSH6-203ENST00000420813 WASH6PQ9NQA3 447 aa17.1■□□□□ 0.33
MSH6-203ENST00000420813 POT1Q9NUX5 634 aa17.1■□□□□ 0.33
MSH6-203ENST00000420813 SIDT1Q9NXL6 827 aaKnown RBP17.1■□□□□ 0.33
MSH6-203ENST00000420813 SCHIP1Q9P0W5 487 aaPredicted RBP17.1■□□□□ 0.33
MSH6-203ENST00000420813 ZNF624Q9P2J8 865 aaPredicted RBP17.1■□□□□ 0.33
MSH6-203ENST00000420813 KLHL3Q9UH77 587 aa17.1■□□□□ 0.33
MSH6-203ENST00000420813 FAM153AQ9UHL3 310 aa17.1■□□□□ 0.33
MSH6-203ENST00000420813 SPO11Q9Y5K1 396 aa17.1■□□□□ 0.33
MSH6-203ENST00000420813 LOC285095A0A1B0GVY8 99 aa17.09■□□□□ 0.33
MSH6-203ENST00000420813 PDZK1P1A8MUH7 402 aa17.09■□□□□ 0.33
MSH6-203ENST00000420813 AURKAO14965 403 aa17.09■□□□□ 0.33
MSH6-203ENST00000420813 POLR1CO15160 346 aaPredicted RBP17.09■□□□□ 0.33
MSH6-203ENST00000420813 PSTPIP1O43586 416 aa17.09■□□□□ 0.33
MSH6-203ENST00000420813 STK17BO94768 372 aa17.09■□□□□ 0.33
MSH6-203ENST00000420813 UBXN7O94888 489 aa17.09■□□□□ 0.33
MSH6-203ENST00000420813 EPOP01588 193 aa17.09■□□□□ 0.33
MSH6-203ENST00000420813 HADHBP55084 474 aaKnown RBP17.09■□□□□ 0.33
MSH6-203ENST00000420813 KCNC4Q03721 635 aa17.09■□□□□ 0.33
MSH6-203ENST00000420813 MAP7Q14244 749 aa17.09■□□□□ 0.33
MSH6-203ENST00000420813 SKOR2Q2VWA4 1001 aaPredicted RBP17.09■□□□□ 0.33
MSH6-203ENST00000420813 PLA2G4EQ3MJ16 856 aa17.09■□□□□ 0.33
MSH6-203ENST00000420813 AGAP9Q5VTM2 703 aa17.09■□□□□ 0.33
MSH6-203ENST00000420813 ZDHHC20Q5W0Z9 365 aa17.09■□□□□ 0.33
MSH6-203ENST00000420813 ZNF547Q8IVP9 402 aa17.09■□□□□ 0.33
MSH6-203ENST00000420813 RBM12BQ8IXT5 1001 aaKnown RBP17.09■□□□□ 0.33
MSH6-203ENST00000420813 CTRCQ99895 268 aa17.09■□□□□ 0.33
MSH6-203ENST00000420813 APMAPQ9HDC9 416 aa17.09■□□□□ 0.33
MSH6-203ENST00000420813 OGFRQ9NZT2 677 aa17.09■□□□□ 0.33
MSH6-203ENST00000420813 HACD3Q9P035 362 aa17.09■□□□□ 0.33
MSH6-203ENST00000420813 TUBD1Q9UJT1 453 aa17.09■□□□□ 0.33
MSH6-203ENST00000420813 TMPRSS11EQ9UL52 423 aa17.09■□□□□ 0.33
MSH6-203ENST00000420813 DNAJC16Q9Y2G8 782 aa17.09■□□□□ 0.33
MSH6-203ENST00000420813 TERTO14746 1132 aaKnown RBP17.08■□□□□ 0.32
MSH6-203ENST00000420813 SUV39H1O43463 412 aa17.08■□□□□ 0.32
MSH6-203ENST00000420813 CST8O60676 142 aa17.08■□□□□ 0.32
MSH6-203ENST00000420813 KCNJ13O60928 360 aa17.08■□□□□ 0.32
MSH6-203ENST00000420813 MTX2O75431 263 aa17.08■□□□□ 0.32
MSH6-203ENST00000420813 DLGAP3O95886 979 aa17.08■□□□□ 0.32
MSH6-203ENST00000420813 TNNT1P13805 278 aa17.08■□□□□ 0.32
MSH6-203ENST00000420813 BRAFP15056 766 aa17.08■□□□□ 0.32
MSH6-203ENST00000420813 VCLP18206 1134 aa17.08■□□□□ 0.32
MSH6-203ENST00000420813 IDSP22304 550 aa17.08■□□□□ 0.32
MSH6-203ENST00000420813 CD68P34810 354 aaPredicted RBP17.08■□□□□ 0.32
MSH6-203ENST00000420813 TNNT3P45378 269 aaPredicted RBP17.08■□□□□ 0.32
MSH6-203ENST00000420813 CSRP3P50461 194 aa17.08■□□□□ 0.32
MSH6-203ENST00000420813 GFERP55789 205 aa17.08■□□□□ 0.32
MSH6-203ENST00000420813 WASHC5Q12768 1159 aa17.08■□□□□ 0.32
MSH6-203ENST00000420813 ATP13A5Q4VNC0 1218 aa17.08■□□□□ 0.32
MSH6-203ENST00000420813 KHDC1Q4VXA5 237 aaKnown RBP17.08■□□□□ 0.32
MSH6-203ENST00000420813 KDELC1Q6UW63 502 aa17.08■□□□□ 0.32
MSH6-203ENST00000420813 SPOCD1Q6ZMY3 1216 aa17.08■□□□□ 0.32
MSH6-203ENST00000420813 B4GALNT4Q76KP1 1039 aa17.08■□□□□ 0.32
MSH6-203ENST00000420813 TIPARPQ7Z3E1 657 aaKnown RBP17.08■□□□□ 0.32
MSH6-203ENST00000420813 BRSK1Q8TDC3 778 aa17.08■□□□□ 0.32
MSH6-203ENST00000420813 VAT1Q99536 393 aa17.08■□□□□ 0.32
MSH6-203ENST00000420813 UBP1Q9NZI7 540 aa17.08■□□□□ 0.32
MSH6-203ENST00000420813 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.08■□□□□ 0.32
MSH6-203ENST00000420813 SAE1Q9UBE0 346 aaPredicted RBP17.08■□□□□ 0.32
MSH6-203ENST00000420813 HYOU1Q9Y4L1 999 aa17.08■□□□□ 0.32
MSH6-203ENST00000420813 LOC101059948A0A1B0GTJ6 334 aa17.07■□□□□ 0.32
MSH6-203ENST00000420813 PYCARD-AS1I3L0S3 204 aa17.07■□□□□ 0.32
MSH6-203ENST00000420813 PECAM1P16284 738 aaPredicted RBP17.07■□□□□ 0.32
MSH6-203ENST00000420813 TYRP1P17643 537 aa17.07■□□□□ 0.32
MSH6-203ENST00000420813 AMD1P17707 334 aa17.07■□□□□ 0.32
MSH6-203ENST00000420813 NFKB1P19838 968 aa17.07■□□□□ 0.32
MSH6-203ENST00000420813 CCR10P46092 362 aa17.07■□□□□ 0.32
MSH6-203ENST00000420813 POLE2P56282 527 aa17.07■□□□□ 0.32
MSH6-203ENST00000420813 WNT3AP56704 352 aa17.07■□□□□ 0.32
MSH6-203ENST00000420813 TMEM115Q12893 351 aaPredicted RBP17.07■□□□□ 0.32
MSH6-203ENST00000420813 GTF2H3Q13889 308 aa17.07■□□□□ 0.32
MSH6-203ENST00000420813 CRTC2Q53ET0 693 aaPredicted RBP17.07■□□□□ 0.32
MSH6-203ENST00000420813 TFDP3Q5H9I0 405 aa17.07■□□□□ 0.32
MSH6-203ENST00000420813 C11orf96Q7Z7L8 435 aa17.07■□□□□ 0.32
MSH6-203ENST00000420813 TRAPPC5Q8IUR0 188 aa17.07■□□□□ 0.32
MSH6-203ENST00000420813 TTC30BQ8N4P2 665 aa17.07■□□□□ 0.32
MSH6-203ENST00000420813 ESX1Q8N693 406 aa17.07■□□□□ 0.32
MSH6-203ENST00000420813 P3H4Q92791 437 aa17.07■□□□□ 0.32
MSH6-203ENST00000420813 FCRL5Q96RD9 977 aa17.07■□□□□ 0.32
MSH6-203ENST00000420813 ZCCHC2Q9C0B9 1178 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms