RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 OR13H1Q8NG92 308 aa12.34□□□□□ -0.43
TMEM53-206ENST00000420706 NAT14Q8WUY8 206 aa12.34□□□□□ -0.43
TMEM53-206ENST00000420706 SGF29Q96ES7 293 aa12.34□□□□□ -0.43
TMEM53-206ENST00000420706 KLHDC7BQ96G42 594 aa12.34□□□□□ -0.43
TMEM53-206ENST00000420706 DCUN1D1Q96GG9 259 aa12.34□□□□□ -0.43
TMEM53-206ENST00000420706 VPS39Q96JC1 886 aa12.34□□□□□ -0.43
TMEM53-206ENST00000420706 AARSD1Q9BTE6 412 aaKnown RBP12.34□□□□□ -0.43
TMEM53-206ENST00000420706 MIR1-1HGQ9H1L0 117 aa12.34□□□□□ -0.43
TMEM53-206ENST00000420706 OR2AG1Q9H205 316 aa12.34□□□□□ -0.43
TMEM53-206ENST00000420706 AASDHPPTQ9NRN7 309 aa12.34□□□□□ -0.43
TMEM53-206ENST00000420706 ZNF446Q9NWS9 450 aa12.34□□□□□ -0.43
TMEM53-206ENST00000420706 PSMC3IPQ9P2W1 217 aaPredicted RBP12.34□□□□□ -0.43
TMEM53-206ENST00000420706 RAPGEFL1Q9UHV5 662 aa12.34□□□□□ -0.43
TMEM53-206ENST00000420706 FAM95CA0A1B0GW59 222 aa12.33□□□□□ -0.44
TMEM53-206ENST00000420706 TMEM202A6NGA9 273 aa12.33□□□□□ -0.44
TMEM53-206ENST00000420706 SMIM23A6NLE4 172 aa12.33□□□□□ -0.44
TMEM53-206ENST00000420706 AGPSO00116 658 aa12.33□□□□□ -0.44
TMEM53-206ENST00000420706 NUAK1O60285 661 aa12.33□□□□□ -0.44
TMEM53-206ENST00000420706 DNAJC6O75061 913 aa12.33□□□□□ -0.44
TMEM53-206ENST00000420706 CDH16O75309 829 aa12.33□□□□□ -0.44
TMEM53-206ENST00000420706 AP2A2O94973 939 aa12.33□□□□□ -0.44
TMEM53-206ENST00000420706 ESR1P03372 595 aa12.33□□□□□ -0.44
TMEM53-206ENST00000420706 FUCA1P04066 466 aa12.33□□□□□ -0.44
TMEM53-206ENST00000420706 CEACAM5P06731 702 aa12.33□□□□□ -0.44
TMEM53-206ENST00000420706 ITGA2BP08514 1039 aa12.33□□□□□ -0.44
TMEM53-206ENST00000420706 THEGLP0DJG4 465 aa12.33□□□□□ -0.44
TMEM53-206ENST00000420706 ZNF8P17098 575 aaPredicted RBP12.33□□□□□ -0.44
TMEM53-206ENST00000420706 ITPKAP23677 461 aa12.33□□□□□ -0.44
TMEM53-206ENST00000420706 POLD2P49005 469 aa12.33□□□□□ -0.44
TMEM53-206ENST00000420706 CTSCP53634 463 aa12.33□□□□□ -0.44
TMEM53-206ENST00000420706 GTF2H3Q13889 308 aa12.33□□□□□ -0.44
TMEM53-206ENST00000420706 SIM2Q14190 667 aaPredicted RBP12.33□□□□□ -0.44
TMEM53-206ENST00000420706 NFATC4Q14934 902 aa12.33□□□□□ -0.44
TMEM53-206ENST00000420706 RBM20Q5T481 1227 aaKnown RBP12.33□□□□□ -0.44
TMEM53-206ENST00000420706 LGSNQ5TDP6 509 aa12.33□□□□□ -0.44
TMEM53-206ENST00000420706 HECTD2Q5U5R9 776 aa12.33□□□□□ -0.44
TMEM53-206ENST00000420706 LYSMD4Q5XG99 296 aa12.33□□□□□ -0.44
TMEM53-206ENST00000420706 DOK6Q6PKX4 331 aa12.33□□□□□ -0.44
TMEM53-206ENST00000420706 ENPP7Q6UWV6 458 aa12.33□□□□□ -0.44
TMEM53-206ENST00000420706 MACC1Q6ZN28 852 aa12.33□□□□□ -0.44
TMEM53-206ENST00000420706 DET1Q7L5Y6 550 aa12.33□□□□□ -0.44
TMEM53-206ENST00000420706 IQCHQ86VS3 1027 aa12.33□□□□□ -0.44
TMEM53-206ENST00000420706 CYP4X1Q8N118 509 aa12.33□□□□□ -0.44
TMEM53-206ENST00000420706 ACVR1CQ8NER5 493 aa12.33□□□□□ -0.44
TMEM53-206ENST00000420706 ZBTB9Q96C00 473 aa12.33□□□□□ -0.44
TMEM53-206ENST00000420706 ATXN7L3BQ96GX2 97 aa12.33□□□□□ -0.44
TMEM53-206ENST00000420706 GPR22Q99680 433 aa12.33□□□□□ -0.44
TMEM53-206ENST00000420706 CLPBQ9H078 707 aa12.33□□□□□ -0.44
TMEM53-206ENST00000420706 TM9SF3Q9HD45 589 aa12.33□□□□□ -0.44
TMEM53-206ENST00000420706 GPR27Q9NS67 375 aa12.33□□□□□ -0.44
TMEM53-206ENST00000420706 CTNNAL1Q9UBT7 734 aa12.33□□□□□ -0.44
TMEM53-206ENST00000420706 TBK1Q9UHD2 729 aa12.33□□□□□ -0.44
TMEM53-206ENST00000420706 CORO1CQ9ULV4 474 aaPredicted RBP12.33□□□□□ -0.44
TMEM53-206ENST00000420706 SLC17A4Q9Y2C5 497 aa12.33□□□□□ -0.44
TMEM53-206ENST00000420706 VWA7Q9Y334 891 aa12.33□□□□□ -0.44
TMEM53-206ENST00000420706 PCDHB1Q9Y5F3 818 aa12.33□□□□□ -0.44
TMEM53-206ENST00000420706 COMMD10Q9Y6G5 202 aa12.33□□□□□ -0.44
TMEM53-206ENST00000420706 IQANK1A0A1B0GTG1 560 aa12.32□□□□□ -0.44
TMEM53-206ENST00000420706 IQCF5A8MTL0 148 aa12.32□□□□□ -0.44
TMEM53-206ENST00000420706 CHUKO15111 745 aa12.32□□□□□ -0.44
TMEM53-206ENST00000420706 BCAT2O15382 392 aaPredicted RBP12.32□□□□□ -0.44
TMEM53-206ENST00000420706 ATP8B1O43520 1251 aa12.32□□□□□ -0.44
TMEM53-206ENST00000420706 KRT38O76015 456 aa12.32□□□□□ -0.44
TMEM53-206ENST00000420706 SNRPAP09012 282 aaKnown RBP12.32□□□□□ -0.44
TMEM53-206ENST00000420706 OR56A5P0C7T3 313 aa12.32□□□□□ -0.44
TMEM53-206ENST00000420706 KELP23276 732 aa12.32□□□□□ -0.44
TMEM53-206ENST00000420706 CNTFP26441 200 aa12.32□□□□□ -0.44
TMEM53-206ENST00000420706 HTR1BP28222 390 aa12.32□□□□□ -0.44
TMEM53-206ENST00000420706 THOP1P52888 689 aa12.32□□□□□ -0.44
TMEM53-206ENST00000420706 TIAL1Q01085 375 aaKnown RBP eCLIP12.32□□□□□ -0.44
TMEM53-206ENST00000420706 BMPR2Q13873 1038 aa12.32□□□□□ -0.44
TMEM53-206ENST00000420706 PTK2BQ14289 1009 aa12.32□□□□□ -0.44
TMEM53-206ENST00000420706 KRT71Q3SY84 523 aa12.32□□□□□ -0.44
TMEM53-206ENST00000420706 MROH9Q5TGP6 573 aa12.32□□□□□ -0.44
TMEM53-206ENST00000420706 PTRHD1Q6GMV3 140 aaKnown RBP12.32□□□□□ -0.44
TMEM53-206ENST00000420706 FAM45BPQ6NSW5 357 aa12.32□□□□□ -0.44
TMEM53-206ENST00000420706 CROCCP2Q86T23 111 aa12.32□□□□□ -0.44
TMEM53-206ENST00000420706 DCP2Q8IU60 420 aaKnown RBP12.32□□□□□ -0.44
TMEM53-206ENST00000420706 SLC22A18ASQ8N1D0 253 aa12.32□□□□□ -0.44
TMEM53-206ENST00000420706 RIBC1Q8N443 379 aaPredicted RBP12.32□□□□□ -0.44
TMEM53-206ENST00000420706 DCLK2Q8N568 766 aa12.32□□□□□ -0.44
TMEM53-206ENST00000420706 GPATCH11Q8N954 259 aa12.32□□□□□ -0.44
TMEM53-206ENST00000420706 FAM45AQ8TCE6 357 aa12.32□□□□□ -0.44
TMEM53-206ENST00000420706 MZB1Q8WU39 189 aa12.32□□□□□ -0.44
TMEM53-206ENST00000420706 SCARF2Q96GP6 870 aaPredicted RBP12.32□□□□□ -0.44
TMEM53-206ENST00000420706 ELMO2Q96JJ3 720 aa12.32□□□□□ -0.44
TMEM53-206ENST00000420706 WDR92Q96MX6 357 aa12.32□□□□□ -0.44
TMEM53-206ENST00000420706 NDNQ99608 321 aa12.32□□□□□ -0.44
TMEM53-206ENST00000420706 ZCCHC2Q9C0B9 1178 aaKnown RBP12.32□□□□□ -0.44
TMEM53-206ENST00000420706 CCDC68Q9H2F9 335 aa12.32□□□□□ -0.44
TMEM53-206ENST00000420706 TMEM74BQ9NUR3 256 aa12.32□□□□□ -0.44
TMEM53-206ENST00000420706 LGALS13Q9UHV8 139 aa12.32□□□□□ -0.44
TMEM53-206ENST00000420706 GNPTGQ9UJJ9 305 aa12.32□□□□□ -0.44
TMEM53-206ENST00000420706 GPR34Q9UPC5 381 aa12.32□□□□□ -0.44
TMEM53-206ENST00000420706 MED16Q9Y2X0 877 aa12.32□□□□□ -0.44
TMEM53-206ENST00000420706 PCYT1BQ9Y5K3 369 aaPredicted RBP12.32□□□□□ -0.44
TMEM53-206ENST00000420706 TNRC6BQ9UPQ9 1833 aaKnown RBP12.32□□□□□ -0.44
TMEM53-206ENST00000420706 SPTY2D1-AS1A0A0U1RR47 76 aa12.31□□□□□ -0.44
TMEM53-206ENST00000420706 A0A1B0GTW7 788 aa12.31□□□□□ -0.44
TMEM53-206ENST00000420706 OR2AG2A6NM03 316 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms