RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 ZW10O43264 779 aa10.88□□□□□ -0.67
SSBP3-206ENST00000420121 SNX2O60749 519 aa10.88□□□□□ -0.67
SSBP3-206ENST00000420121 ZNF7P17097 686 aaPredicted RBP10.88□□□□□ -0.67
SSBP3-206ENST00000420121 CTNNA2P26232 953 aa10.88□□□□□ -0.67
SSBP3-206ENST00000420121 PTPN7P35236 360 aa10.88□□□□□ -0.67
SSBP3-206ENST00000420121 ADRA1AP35348 466 aa10.88□□□□□ -0.67
SSBP3-206ENST00000420121 SLC19A1P41440 591 aa10.88□□□□□ -0.67
SSBP3-206ENST00000420121 EPHA4P54764 986 aa10.88□□□□□ -0.67
SSBP3-206ENST00000420121 OTUD4Q01804 1114 aaKnown RBP10.88□□□□□ -0.67
SSBP3-206ENST00000420121 MPP3Q13368 585 aa10.88□□□□□ -0.67
SSBP3-206ENST00000420121 MSLNQ13421 630 aaPredicted RBP10.88□□□□□ -0.67
SSBP3-206ENST00000420121 NFATC2Q13469 925 aa10.88□□□□□ -0.67
SSBP3-206ENST00000420121 BIRC2Q13490 618 aa10.88□□□□□ -0.67
SSBP3-206ENST00000420121 OLIG2Q13516 323 aa10.88□□□□□ -0.67
SSBP3-206ENST00000420121 KIR2DS5Q14953 304 aa10.88□□□□□ -0.67
SSBP3-206ENST00000420121 PLA2G4EQ3MJ16 856 aa10.88□□□□□ -0.67
SSBP3-206ENST00000420121 WDR74Q6RFH5 385 aaPredicted RBP10.88□□□□□ -0.67
SSBP3-206ENST00000420121 PID1Q7Z2X4 250 aa10.88□□□□□ -0.67
SSBP3-206ENST00000420121 VASH2Q86V25 355 aa10.88□□□□□ -0.67
SSBP3-206ENST00000420121 LRRTM4Q86VH4 590 aa10.88□□□□□ -0.67
SSBP3-206ENST00000420121 TMTC1Q8IUR5 882 aa10.88□□□□□ -0.67
SSBP3-206ENST00000420121 HOMEZQ8IX15 550 aa10.88□□□□□ -0.67
SSBP3-206ENST00000420121 SLC25A41Q8N5S1 370 aa10.88□□□□□ -0.67
SSBP3-206ENST00000420121 ACRBPQ8NEB7 543 aa10.88□□□□□ -0.67
SSBP3-206ENST00000420121 ACTL9Q8TC94 416 aa10.88□□□□□ -0.67
SSBP3-206ENST00000420121 SRPK1Q96SB4 655 aaKnown RBP10.88□□□□□ -0.67
SSBP3-206ENST00000420121 SLC38A3Q99624 504 aa10.88□□□□□ -0.67
SSBP3-206ENST00000420121 DPYSL5Q9BPU6 564 aa10.88□□□□□ -0.67
SSBP3-206ENST00000420121 TIMM29Q9BSF4 260 aa10.88□□□□□ -0.67
SSBP3-206ENST00000420121 TBC1D10AQ9BXI6 508 aa10.88□□□□□ -0.67
SSBP3-206ENST00000420121 SPRY4Q9C004 299 aa10.88□□□□□ -0.67
SSBP3-206ENST00000420121 GBA3Q9H227 469 aa10.88□□□□□ -0.67
SSBP3-206ENST00000420121 TRABDQ9H4I3 376 aa10.88□□□□□ -0.67
SSBP3-206ENST00000420121 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.88□□□□□ -0.67
SSBP3-206ENST00000420121 CPNE7Q9UBL6 633 aa10.88□□□□□ -0.67
SSBP3-206ENST00000420121 EFR3BQ9Y2G0 817 aa10.88□□□□□ -0.67
SSBP3-206ENST00000420121 B3GALT1Q9Y5Z6 326 aa10.88□□□□□ -0.67
SSBP3-206ENST00000420121 PIKFYVEQ9Y2I7 2098 aa10.88□□□□□ -0.67
SSBP3-206ENST00000420121 MN1Q10571 1320 aaPredicted RBP10.87□□□□□ -0.67
SSBP3-206ENST00000420121 GRID2IPA4D2P6 1211 aa10.87□□□□□ -0.67
SSBP3-206ENST00000420121 LILRA5A6NI73 299 aa10.87□□□□□ -0.67
SSBP3-206ENST00000420121 OR5K4A6NMS3 321 aa10.87□□□□□ -0.67
SSBP3-206ENST00000420121 KMOO15229 486 aa10.87□□□□□ -0.67
SSBP3-206ENST00000420121 BUD23O43709 281 aaKnown RBP10.87□□□□□ -0.67
SSBP3-206ENST00000420121 DUX1O43812 170 aa10.87□□□□□ -0.67
SSBP3-206ENST00000420121 VEGFDO43915 354 aa10.87□□□□□ -0.67
SSBP3-206ENST00000420121 UGT1A9O60656 530 aa10.87□□□□□ -0.67
SSBP3-206ENST00000420121 AGTP01019 485 aa10.87□□□□□ -0.67
SSBP3-206ENST00000420121 XRCC1P18887 633 aaPredicted RBP10.87□□□□□ -0.67
SSBP3-206ENST00000420121 UGT1A6P19224 532 aa10.87□□□□□ -0.67
SSBP3-206ENST00000420121 HLA-DPA1P20036 260 aa10.87□□□□□ -0.67
SSBP3-206ENST00000420121 UGT1A1P22309 533 aa10.87□□□□□ -0.67
SSBP3-206ENST00000420121 UGT1A4P22310 534 aa10.87□□□□□ -0.67
SSBP3-206ENST00000420121 CD82P27701 267 aa10.87□□□□□ -0.67
SSBP3-206ENST00000420121 UGT1A3P35503 534 aa10.87□□□□□ -0.67
SSBP3-206ENST00000420121 CTSCP53634 463 aa10.87□□□□□ -0.67
SSBP3-206ENST00000420121 COPS2P61201 443 aa10.87□□□□□ -0.67
SSBP3-206ENST00000420121 TMEM115Q12893 351 aaPredicted RBP10.87□□□□□ -0.67
SSBP3-206ENST00000420121 LY6DQ14210 128 aa10.87□□□□□ -0.67
SSBP3-206ENST00000420121 PTPRCAPQ14761 206 aa10.87□□□□□ -0.67
SSBP3-206ENST00000420121 CHRNA6Q15825 494 aa10.87□□□□□ -0.67
SSBP3-206ENST00000420121 CCDC70Q6NSX1 233 aa10.87□□□□□ -0.67
SSBP3-206ENST00000420121 ABRAXAS1Q6UWZ7 409 aa10.87□□□□□ -0.67
SSBP3-206ENST00000420121 XKR5Q6UX68 686 aa10.87□□□□□ -0.67
SSBP3-206ENST00000420121 SLC9B2Q86UD5 537 aa10.87□□□□□ -0.67
SSBP3-206ENST00000420121 KLHDC8BQ8IXV7 354 aa10.87□□□□□ -0.67
SSBP3-206ENST00000420121 AGBL5Q8NDL9 886 aa10.87□□□□□ -0.67
SSBP3-206ENST00000420121 IPMKQ8NFU5 416 aa10.87□□□□□ -0.67
SSBP3-206ENST00000420121 OR10G6Q8NH81 332 aa10.87□□□□□ -0.67
SSBP3-206ENST00000420121 ART4Q93070 314 aa10.87□□□□□ -0.67
SSBP3-206ENST00000420121 TAAR9Q96RI9 348 aa10.87□□□□□ -0.67
SSBP3-206ENST00000420121 FAM118BQ9BPY3 351 aa10.87□□□□□ -0.67
SSBP3-206ENST00000420121 ANP32EQ9BTT0 268 aa10.87□□□□□ -0.67
SSBP3-206ENST00000420121 OSBPL8Q9BZF1 889 aa10.87□□□□□ -0.67
SSBP3-206ENST00000420121 UCK1Q9HA47 277 aa10.87□□□□□ -0.67
SSBP3-206ENST00000420121 UGT1A7Q9HAW7 530 aa10.87□□□□□ -0.67
SSBP3-206ENST00000420121 UGT1A10Q9HAW8 530 aa10.87□□□□□ -0.67
SSBP3-206ENST00000420121 UGT1A8Q9HAW9 530 aa10.87□□□□□ -0.67
SSBP3-206ENST00000420121 HACD3Q9P035 362 aa10.87□□□□□ -0.67
SSBP3-206ENST00000420121 TRHDEQ9UKU6 1024 aa10.87□□□□□ -0.67
SSBP3-206ENST00000420121 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.87□□□□□ -0.67
SSBP3-206ENST00000420121 SLC30A1Q9Y6M5 507 aa10.87□□□□□ -0.67
SSBP3-206ENST00000420121 EIF4E1BA6NMX2 242 aaKnown RBP10.86□□□□□ -0.67
SSBP3-206ENST00000420121 EFCAB7A8K855 629 aa10.86□□□□□ -0.67
SSBP3-206ENST00000420121 B4E171 279 aa10.86□□□□□ -0.67
SSBP3-206ENST00000420121 CDK14O94921 469 aa10.86□□□□□ -0.67
SSBP3-206ENST00000420121 C9P02748 559 aa10.86□□□□□ -0.67
SSBP3-206ENST00000420121 PYGMP11217 842 aa10.86□□□□□ -0.67
SSBP3-206ENST00000420121 SLC2A4P14672 509 aa10.86□□□□□ -0.67
SSBP3-206ENST00000420121 PSMB4P28070 264 aa10.86□□□□□ -0.67
SSBP3-206ENST00000420121 CSTF2P33240 577 aaKnown RBP eCLIP10.86□□□□□ -0.67
SSBP3-206ENST00000420121 SPAM1P38567 509 aa10.86□□□□□ -0.67
SSBP3-206ENST00000420121 TSPAN7P41732 249 aa10.86□□□□□ -0.67
SSBP3-206ENST00000420121 VAV2P52735 878 aa10.86□□□□□ -0.67
SSBP3-206ENST00000420121 GFERP55789 205 aa10.86□□□□□ -0.67
SSBP3-206ENST00000420121 INSCQ1MX18 579 aa10.86□□□□□ -0.67
SSBP3-206ENST00000420121 LINC00303Q3SY05 128 aa10.86□□□□□ -0.67
SSBP3-206ENST00000420121 TAF1BQ53T94 588 aaPredicted RBP10.86□□□□□ -0.67
SSBP3-206ENST00000420121 ANKRD20A2Q5SQ80 823 aa10.86□□□□□ -0.67
SSBP3-206ENST00000420121 ANKRD20A1Q5TYW2 823 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms