RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 KIAA1191Q96A73 305 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 DTNBP1Q96EV8 351 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 CENPNQ96H22 339 aaPredicted RBP11.78□□□□□ -0.52
LIMK1-202ENST00000418310 PLEKHG4BQ96PX9 1271 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 SYTL2Q9HCH5 934 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 ACTR3BQ9P1U1 418 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 UBA2Q9UBT2 640 aaPredicted RBP11.78□□□□□ -0.52
LIMK1-202ENST00000418310 UTS2RQ9UKP6 389 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 SLC8A2Q9UPR5 921 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 PHF24Q9UPV7 400 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 U3KQV3 271 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 KANSL1LA0AUZ9 987 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 STX7O15400 261 aaKnown RBP11.78□□□□□ -0.52
LIMK1-202ENST00000418310 NOBOXO60393 691 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 WISP3O95389 354 aaPredicted RBP11.78□□□□□ -0.52
LIMK1-202ENST00000418310 PARNO95453 639 aaKnown RBP11.78□□□□□ -0.52
LIMK1-202ENST00000418310 PRAMEF12O95522 483 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 G6PDP11413 515 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 GKP32189 559 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 PSMD8P48556 350 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 CLCN2P51788 898 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 HMGCS1Q01581 520 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 GNA12Q03113 381 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 PTGR1Q14914 329 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 NFE2Q16621 373 aaPredicted RBP11.78□□□□□ -0.52
LIMK1-202ENST00000418310 ATP6AP1LQ52LC2 224 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 LDLRAP1Q5SW96 308 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 ATXN7L2Q5T6C5 722 aaPredicted RBP11.78□□□□□ -0.52
LIMK1-202ENST00000418310 CST9Q5W186 159 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 GLYATQ6IB77 296 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 GPRIN3Q6ZVF9 776 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 FAM86B1Q8N7N1 296 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 BIRC7Q96CA5 298 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 THAP11Q96EK4 314 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 MYRFLQ96LU7 910 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 ZIC5Q96T25 663 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 ING2Q9H160 280 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 CXorf21Q9HAI6 301 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 AFF4Q9UHB7 1163 aaKnown RBP11.78□□□□□ -0.52
LIMK1-202ENST00000418310 CNOT11Q9UKZ1 510 aaKnown RBP11.78□□□□□ -0.52
LIMK1-202ENST00000418310 A0A1W2PP18 115 aa11.77□□□□□ -0.53
LIMK1-202ENST00000418310 BBIP1A8MTZ0 92 aa11.77□□□□□ -0.53
LIMK1-202ENST00000418310 VPS26AO75436 327 aa11.77□□□□□ -0.53
LIMK1-202ENST00000418310 LDLRP01130 860 aa11.77□□□□□ -0.53
LIMK1-202ENST00000418310 CD247P20963 164 aa11.77□□□□□ -0.53
LIMK1-202ENST00000418310 HOXD9P28356 352 aaPredicted RBP11.77□□□□□ -0.53
LIMK1-202ENST00000418310 CDK9P50750 372 aaKnown RBP11.77□□□□□ -0.53
LIMK1-202ENST00000418310 PSMD7P51665 324 aa11.77□□□□□ -0.53
LIMK1-202ENST00000418310 ERVPABLB-1P60509 514 aa11.77□□□□□ -0.53
LIMK1-202ENST00000418310 GALNT1Q10472 559 aaPredicted RBP11.77□□□□□ -0.53
LIMK1-202ENST00000418310 IMPG1Q17R60 797 aa11.77□□□□□ -0.53
LIMK1-202ENST00000418310 FGD3Q5JSP0 725 aa11.77□□□□□ -0.53
LIMK1-202ENST00000418310 FAM126BQ8IXS8 530 aa11.77□□□□□ -0.53
LIMK1-202ENST00000418310 DRAXINQ8NBI3 349 aaPredicted RBP11.77□□□□□ -0.53
LIMK1-202ENST00000418310 TRPV3Q8NET8 790 aa11.77□□□□□ -0.53
LIMK1-202ENST00000418310 FEM1CQ96JP0 617 aa11.77□□□□□ -0.53
LIMK1-202ENST00000418310 EGFL8Q99944 293 aa11.77□□□□□ -0.53
LIMK1-202ENST00000418310 C17orf80Q9BSJ5 609 aa11.77□□□□□ -0.53
LIMK1-202ENST00000418310 C9orf16Q9BUW7 83 aa11.77□□□□□ -0.53
LIMK1-202ENST00000418310 TFB2MQ9H5Q4 396 aaKnown RBP11.77□□□□□ -0.53
LIMK1-202ENST00000418310 FAM8A1Q9UBU6 413 aa11.77□□□□□ -0.53
LIMK1-202ENST00000418310 PCTPQ9UKL6 214 aa11.77□□□□□ -0.53
LIMK1-202ENST00000418310 PCDHB9Q9Y5E1 797 aa11.77□□□□□ -0.53
LIMK1-202ENST00000418310 PCDHA9Q9Y5H5 950 aa11.77□□□□□ -0.53
LIMK1-202ENST00000418310 SQORQ9Y6N5 450 aa11.77□□□□□ -0.53
LIMK1-202ENST00000418310 A0A087WXM4 84 aa11.77□□□□□ -0.53
LIMK1-202ENST00000418310 C2orf81A6NN90 581 aa11.77□□□□□ -0.53
LIMK1-202ENST00000418310 H0Y626 953 aa11.77□□□□□ -0.53
LIMK1-202ENST00000418310 TRIM16O95361 564 aa11.77□□□□□ -0.53
LIMK1-202ENST00000418310 PKMP14618 531 aaKnown RBP11.77□□□□□ -0.53
LIMK1-202ENST00000418310 IL7RP16871 459 aa11.77□□□□□ -0.53
LIMK1-202ENST00000418310 RPS9P46781 194 aaKnown RBP11.77□□□□□ -0.53
LIMK1-202ENST00000418310 HSPA7P48741 367 aa11.77□□□□□ -0.53
LIMK1-202ENST00000418310 CCT8P50990 548 aa11.77□□□□□ -0.53
LIMK1-202ENST00000418310 RPL38P63173 70 aaKnown RBP11.77□□□□□ -0.53
LIMK1-202ENST00000418310 C6orf136Q5SQH8 315 aa11.77□□□□□ -0.53
LIMK1-202ENST00000418310 FAM151BQ6UXP7 276 aa11.77□□□□□ -0.53
LIMK1-202ENST00000418310 KCTD8Q6ZWB6 473 aa11.77□□□□□ -0.53
LIMK1-202ENST00000418310 TMEM173Q86WV6 379 aaPredicted RBP11.77□□□□□ -0.53
LIMK1-202ENST00000418310 MINDY1Q8N5J2 469 aa11.77□□□□□ -0.53
LIMK1-202ENST00000418310 TEX26Q8N6G2 289 aa11.77□□□□□ -0.53
LIMK1-202ENST00000418310 NSMCE2Q96MF7 247 aa11.77□□□□□ -0.53
LIMK1-202ENST00000418310 THUMPD3Q9BV44 507 aaKnown RBP11.77□□□□□ -0.53
LIMK1-202ENST00000418310 ARMC1Q9NVT9 282 aa11.77□□□□□ -0.53
LIMK1-202ENST00000418310 ZNHIT2Q9UHR6 403 aa11.77□□□□□ -0.53
LIMK1-202ENST00000418310 TMCO1Q9UM00 188 aa11.77□□□□□ -0.53
LIMK1-202ENST00000418310 ZNF711Q9Y462 761 aa11.77□□□□□ -0.53
LIMK1-202ENST00000418310 RAI2Q9Y5P3 530 aa11.77□□□□□ -0.53
LIMK1-202ENST00000418310 TDRD15B5MCY1 1934 aaKnown RBP11.77□□□□□ -0.53
LIMK1-202ENST00000418310 WASH4PA8MWX3 477 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 RSL1D1O76021 490 aaKnown RBP11.76□□□□□ -0.53
LIMK1-202ENST00000418310 TYMPP19971 482 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 HTR7P34969 479 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 ALDH3B2P48448 385 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 SH3BGRP55822 239 aaPredicted RBP11.76□□□□□ -0.53
LIMK1-202ENST00000418310 BNIP3Q12983 259 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 DSC3Q14574 896 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 PARP15Q460N3 678 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 KCTD21Q4G0X4 260 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 KLHL35Q6PF15 583 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms