RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 CRTC3Q6UUV7 619 aa17.62■□□□□ 0.41
CPNE1-210ENST00000416778 ABRAXAS1Q6UWZ7 409 aa17.62■□□□□ 0.41
CPNE1-210ENST00000416778 RANBP10Q6VN20 620 aa17.62■□□□□ 0.41
CPNE1-210ENST00000416778 C11orf96Q7Z7L8 435 aa17.62■□□□□ 0.41
CPNE1-210ENST00000416778 LRRTM4Q86VH4 590 aa17.62■□□□□ 0.41
CPNE1-210ENST00000416778 PHYKPLQ8IUZ5 450 aa17.62■□□□□ 0.41
CPNE1-210ENST00000416778 LRRC57Q8N9N7 239 aa17.62■□□□□ 0.41
CPNE1-210ENST00000416778 IPMKQ8NFU5 416 aa17.62■□□□□ 0.41
CPNE1-210ENST00000416778 ACTL9Q8TC94 416 aa17.62■□□□□ 0.41
CPNE1-210ENST00000416778 NCSTNQ92542 709 aa17.62■□□□□ 0.41
CPNE1-210ENST00000416778 GORASP1Q9BQQ3 440 aa17.62■□□□□ 0.41
CPNE1-210ENST00000416778 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.62■□□□□ 0.41
CPNE1-210ENST00000416778 OSBPL8Q9BZF1 889 aa17.62■□□□□ 0.41
CPNE1-210ENST00000416778 UGT1A7Q9HAW7 530 aa17.62■□□□□ 0.41
CPNE1-210ENST00000416778 UGT1A10Q9HAW8 530 aa17.62■□□□□ 0.41
CPNE1-210ENST00000416778 UGT1A8Q9HAW9 530 aa17.62■□□□□ 0.41
CPNE1-210ENST00000416778 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.62■□□□□ 0.412e-6■■■■□ 24.6
CPNE1-210ENST00000416778 HACD3Q9P035 362 aa17.62■□□□□ 0.41
CPNE1-210ENST00000416778 ZNF624Q9P2J8 865 aaPredicted RBP17.62■□□□□ 0.41
CPNE1-210ENST00000416778 SCN8AQ9UQD0 1980 aa17.62■□□□□ 0.41
CPNE1-210ENST00000416778 B4E171 279 aa17.61■□□□□ 0.41
CPNE1-210ENST00000416778 PYGMP11217 842 aa17.61■□□□□ 0.41
CPNE1-210ENST00000416778 HLA-DPA1P20036 260 aa17.61■□□□□ 0.41
CPNE1-210ENST00000416778 CD82P27701 267 aa17.61■□□□□ 0.41
CPNE1-210ENST00000416778 CSTF2P33240 577 aaKnown RBP eCLIP17.61■□□□□ 0.412e-45■■■■■ 66.1
CPNE1-210ENST00000416778 PTPN7P35236 360 aa17.61■□□□□ 0.41
CPNE1-210ENST00000416778 SLC19A1P41440 591 aa17.61■□□□□ 0.41
CPNE1-210ENST00000416778 TSPAN7P41732 249 aa17.61■□□□□ 0.41
CPNE1-210ENST00000416778 EPHA4P54764 986 aa17.61■□□□□ 0.41
CPNE1-210ENST00000416778 NAP1L1P55209 391 aaKnown RBP17.61■□□□□ 0.41
CPNE1-210ENST00000416778 RWDD2BP57060 319 aa17.61■□□□□ 0.41
CPNE1-210ENST00000416778 OTUD4Q01804 1114 aaKnown RBP17.61■□□□□ 0.41
CPNE1-210ENST00000416778 C19orf57Q0VDD7 668 aa17.61■□□□□ 0.41
CPNE1-210ENST00000416778 CHRNA6Q15825 494 aa17.61■□□□□ 0.41
CPNE1-210ENST00000416778 KIAA1614Q5VZ46 1190 aa17.61■□□□□ 0.41
CPNE1-210ENST00000416778 ZDHHC20Q5W0Z9 365 aa17.61■□□□□ 0.41
CPNE1-210ENST00000416778 BRSK1Q8TDC3 778 aa17.61■□□□□ 0.41
CPNE1-210ENST00000416778 ALG3Q92685 438 aa17.61■□□□□ 0.41
CPNE1-210ENST00000416778 PMEPA1Q969W9 287 aa17.61■□□□□ 0.41
CPNE1-210ENST00000416778 TIMM29Q9BSF4 260 aa17.61■□□□□ 0.41
CPNE1-210ENST00000416778 UCK1Q9HA47 277 aa17.61■□□□□ 0.41
CPNE1-210ENST00000416778 RSPH14Q9UHP6 348 aa17.61■□□□□ 0.41
CPNE1-210ENST00000416778 PIEZO2Q9H5I5 2752 aa17.61■□□□□ 0.41
CPNE1-210ENST00000416778 CCDC66A2RUB6 948 aa17.6■□□□□ 0.41
CPNE1-210ENST00000416778 A8MU76 341 aa17.6■□□□□ 0.41
CPNE1-210ENST00000416778 GAPDHSO14556 408 aaPredicted RBP17.6■□□□□ 0.41
CPNE1-210ENST00000416778 BUD23O43709 281 aaKnown RBP17.6■□□□□ 0.41
CPNE1-210ENST00000416778 DUX1O43812 170 aa17.6■□□□□ 0.41
CPNE1-210ENST00000416778 BRAFP15056 766 aa17.6■□□□□ 0.41
CPNE1-210ENST00000416778 ADRA1AP35348 466 aa17.6■□□□□ 0.41
CPNE1-210ENST00000416778 MSLNQ13421 630 aaPredicted RBP17.6■□□□□ 0.41
CPNE1-210ENST00000416778 PTPRCAPQ14761 206 aa17.6■□□□□ 0.41
CPNE1-210ENST00000416778 TAF1BQ53T94 588 aaPredicted RBP17.6■□□□□ 0.41
CPNE1-210ENST00000416778 ANKRD20A2Q5SQ80 823 aa17.6■□□□□ 0.41
CPNE1-210ENST00000416778 CCDC181Q5TID7 509 aa17.6■□□□□ 0.41
CPNE1-210ENST00000416778 ANKRD20A1Q5TYW2 823 aa17.6■□□□□ 0.41
CPNE1-210ENST00000416778 ANKRD20A3Q5VUR7 823 aa17.6■□□□□ 0.41
CPNE1-210ENST00000416778 AADACL2Q6P093 401 aa17.6■□□□□ 0.41
CPNE1-210ENST00000416778 WASH2PQ6VEQ5 465 aa17.6■□□□□ 0.41
CPNE1-210ENST00000416778 ZNF843Q8N446 348 aa17.6■□□□□ 0.41
CPNE1-210ENST00000416778 BMPERQ8N8U9 685 aa17.6■□□□□ 0.41
CPNE1-210ENST00000416778 ACRBPQ8NEB7 543 aa17.6■□□□□ 0.41
CPNE1-210ENST00000416778 BLOC1S5Q8TDH9 187 aa17.6■□□□□ 0.41
CPNE1-210ENST00000416778 ART4Q93070 314 aa17.6■□□□□ 0.41
CPNE1-210ENST00000416778 TBC1D10AQ9BXI6 508 aa17.6■□□□□ 0.41
CPNE1-210ENST00000416778 SPRY4Q9C004 299 aa17.6■□□□□ 0.41
CPNE1-210ENST00000416778 STN1Q9H668 368 aaKnown RBP17.6■□□□□ 0.41
CPNE1-210ENST00000416778 WASH6PQ9NQA3 447 aa17.6■□□□□ 0.41
CPNE1-210ENST00000416778 SLC39A1Q9NY26 324 aa17.6■□□□□ 0.41
CPNE1-210ENST00000416778 DNAJC16Q9Y2G8 782 aa17.6■□□□□ 0.41
CPNE1-210ENST00000416778 PCDHB11Q9Y5F2 797 aa17.6■□□□□ 0.41
CPNE1-210ENST00000416778 B3GALT1Q9Y5Z6 326 aa17.6■□□□□ 0.41
CPNE1-210ENST00000416778 GCN1Q92616 2671 aaKnown RBP17.59■□□□□ 0.41
CPNE1-210ENST00000416778 GRID2IPA4D2P6 1211 aa17.59■□□□□ 0.41
CPNE1-210ENST00000416778 EFCAB7A8K855 629 aa17.59■□□□□ 0.41
CPNE1-210ENST00000416778 KCNJ13O60928 360 aa17.59■□□□□ 0.41
CPNE1-210ENST00000416778 PPFIA2O75334 1257 aa17.59■□□□□ 0.41
CPNE1-210ENST00000416778 ANXA9O76027 345 aa17.59■□□□□ 0.41
CPNE1-210ENST00000416778 IPO7O95373 1038 aaKnown RBP17.59■□□□□ 0.41
CPNE1-210ENST00000416778 RBP3P10745 1247 aa17.59■□□□□ 0.41
CPNE1-210ENST00000416778 SPAM1P38567 509 aa17.59■□□□□ 0.41
CPNE1-210ENST00000416778 TNNT3P45378 269 aaPredicted RBP17.59■□□□□ 0.41
CPNE1-210ENST00000416778 VAV2P52735 878 aa17.59■□□□□ 0.41
CPNE1-210ENST00000416778 GEMP55040 296 aa17.59■□□□□ 0.41
CPNE1-210ENST00000416778 EIF3EP60228 445 aaKnown RBP17.59■□□□□ 0.41
CPNE1-210ENST00000416778 MC2RQ01718 297 aa17.59■□□□□ 0.41
CPNE1-210ENST00000416778 INSCQ1MX18 579 aa17.59■□□□□ 0.41
CPNE1-210ENST00000416778 SNAP47Q5SQN1 464 aa17.59■□□□□ 0.41
CPNE1-210ENST00000416778 AGAP9Q5VTM2 703 aa17.59■□□□□ 0.41
CPNE1-210ENST00000416778 TMEM139Q8IV31 216 aa17.59■□□□□ 0.41
CPNE1-210ENST00000416778 RASGEF1AQ8N9B8 481 aa17.59■□□□□ 0.41
CPNE1-210ENST00000416778 AVL9Q8NBF6 648 aa17.59■□□□□ 0.41
CPNE1-210ENST00000416778 NKD1Q969G9 470 aa17.59■□□□□ 0.41
CPNE1-210ENST00000416778 BAG1Q99933 345 aaPredicted RBP17.59■□□□□ 0.41
CPNE1-210ENST00000416778 DDA1Q9BW61 102 aa17.59■□□□□ 0.41
CPNE1-210ENST00000416778 GBA3Q9H227 469 aa17.59■□□□□ 0.41
CPNE1-210ENST00000416778 OSGEPL1Q9H4B0 414 aa17.59■□□□□ 0.41
CPNE1-210ENST00000416778 EPB41L1Q9H4G0 881 aa17.59■□□□□ 0.41
CPNE1-210ENST00000416778 WDR70Q9NW82 654 aa17.59■□□□□ 0.41
CPNE1-210ENST00000416778 OGFRQ9NZT2 677 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms