RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 ZFAND4Q86XD8 727 aa24.64■■□□□ 1.54
HLA-C-204ENST00000415537 ACTL9Q8TC94 416 aa24.64■■□□□ 1.54
HLA-C-204ENST00000415537 BRSK1Q8TDC3 778 aa24.64■■□□□ 1.54
HLA-C-204ENST00000415537 NCSTNQ92542 709 aa24.64■■□□□ 1.54
HLA-C-204ENST00000415537 TIMM29Q9BSF4 260 aa24.64■■□□□ 1.54
HLA-C-204ENST00000415537 C10orf88Q9H8K7 445 aa24.64■■□□□ 1.54
HLA-C-204ENST00000415537 DNAJC16Q9Y2G8 782 aa24.64■■□□□ 1.54
HLA-C-204ENST00000415537 ANXA9O76027 345 aa24.63■■□□□ 1.53
HLA-C-204ENST00000415537 FGF3P11487 239 aaPredicted RBP24.63■■□□□ 1.53
HLA-C-204ENST00000415537 SPAM1P38567 509 aa24.63■■□□□ 1.53
HLA-C-204ENST00000415537 MAPK9P45984 424 aa24.63■■□□□ 1.53
HLA-C-204ENST00000415537 VAV2P52735 878 aa24.63■■□□□ 1.53
HLA-C-204ENST00000415537 EPHA4P54764 986 aa24.63■■□□□ 1.53
HLA-C-204ENST00000415537 TMEM115Q12893 351 aaPredicted RBP24.63■■□□□ 1.53
HLA-C-204ENST00000415537 SNAP47Q5SQN1 464 aa24.63■■□□□ 1.53
HLA-C-204ENST00000415537 MANEAQ5SRI9 462 aa24.63■■□□□ 1.53
HLA-C-204ENST00000415537 CDKL3Q8IVW4 592 aaPredicted RBP24.63■■□□□ 1.53
HLA-C-204ENST00000415537 TTC30BQ8N4P2 665 aa24.63■■□□□ 1.53
HLA-C-204ENST00000415537 ACRBPQ8NEB7 543 aa24.63■■□□□ 1.53
HLA-C-204ENST00000415537 BAG1Q99933 345 aaPredicted RBP24.63■■□□□ 1.53
HLA-C-204ENST00000415537 GBA3Q9H227 469 aa24.63■■□□□ 1.53
HLA-C-204ENST00000415537 IL26Q9NPH9 171 aa24.63■■□□□ 1.53
HLA-C-204ENST00000415537 IL17CQ9P0M4 197 aa24.63■■□□□ 1.53
HLA-C-204ENST00000415537 SLC23A2Q9UGH3 650 aa24.63■■□□□ 1.53
HLA-C-204ENST00000415537 REXO2Q9Y3B8 237 aaKnown RBP24.63■■□□□ 1.53
HLA-C-204ENST00000415537 PDZK1P1A8MUH7 402 aa24.62■■□□□ 1.53
HLA-C-204ENST00000415537 STK10O94804 968 aaKnown RBP24.62■■□□□ 1.53
HLA-C-204ENST00000415537 TJP3O95049 919 aa24.62■■□□□ 1.53
HLA-C-204ENST00000415537 VCLP18206 1134 aa24.62■■□□□ 1.53
HLA-C-204ENST00000415537 PTPN7P35236 360 aa24.62■■□□□ 1.53
HLA-C-204ENST00000415537 EIF3EP60228 445 aaKnown RBP24.62■■□□□ 1.53
HLA-C-204ENST00000415537 DARS2Q6PI48 645 aaKnown RBP24.62■■□□□ 1.53
HLA-C-204ENST00000415537 FAM129CQ86XR2 697 aa24.62■■□□□ 1.53
HLA-C-204ENST00000415537 TRAPPC5Q8IUR0 188 aa24.62■■□□□ 1.53
HLA-C-204ENST00000415537 TRIM48Q8IWZ4 208 aa24.62■■□□□ 1.53
HLA-C-204ENST00000415537 DTX3LQ8TDB6 740 aa24.62■■□□□ 1.53
HLA-C-204ENST00000415537 WBP1Q96G27 269 aa24.62■■□□□ 1.53
HLA-C-204ENST00000415537 LACRTQ9GZZ8 138 aa24.62■■□□□ 1.53
HLA-C-204ENST00000415537 EPB41L1Q9H4G0 881 aa24.62■■□□□ 1.53
HLA-C-204ENST00000415537 SLC39A1Q9NY26 324 aa24.62■■□□□ 1.53
HLA-C-204ENST00000415537 MGAQ8IWI9 3026 aa24.62■■□□□ 1.53
HLA-C-204ENST00000415537 SMG1Q96Q15 3661 aaKnown RBP24.62■■□□□ 1.53
HLA-C-204ENST00000415537 GLYATL1P3A0A0U1RQE8 302 aa24.61■■□□□ 1.53
HLA-C-204ENST00000415537 A8MU76 341 aa24.61■■□□□ 1.53
HLA-C-204ENST00000415537 STMND1H3BQB6 276 aa24.61■■□□□ 1.53
HLA-C-204ENST00000415537 PJA2O43164 708 aa24.61■■□□□ 1.53
HLA-C-204ENST00000415537 PPFIA2O75334 1257 aa24.61■■□□□ 1.53
HLA-C-204ENST00000415537 VIPP01282 170 aa24.61■■□□□ 1.53
HLA-C-204ENST00000415537 PTMAP06454 111 aaKnown RBP24.61■■□□□ 1.53
HLA-C-204ENST00000415537 RBP3P10745 1247 aa24.61■■□□□ 1.53
HLA-C-204ENST00000415537 XRCC1P18887 633 aaPredicted RBP24.61■■□□□ 1.53
HLA-C-204ENST00000415537 ITGA9Q13797 1035 aa24.61■■□□□ 1.53
HLA-C-204ENST00000415537 PRPSAP1Q14558 356 aa24.61■■□□□ 1.53
HLA-C-204ENST00000415537 SEPT7Q16181 437 aaKnown RBP24.61■■□□□ 1.53
HLA-C-204ENST00000415537 KHDC1Q4VXA5 237 aaKnown RBP24.61■■□□□ 1.53
HLA-C-204ENST00000415537 KIAA1614Q5VZ46 1190 aa24.61■■□□□ 1.53
HLA-C-204ENST00000415537 FAM151BQ6UXP7 276 aa24.61■■□□□ 1.53
HLA-C-204ENST00000415537 TXLNBQ8N3L3 684 aa24.61■■□□□ 1.53
HLA-C-204ENST00000415537 ART4Q93070 314 aa24.61■■□□□ 1.53
HLA-C-204ENST00000415537 FICDQ9BVA6 458 aa24.61■■□□□ 1.53
HLA-C-204ENST00000415537 ZCCHC2Q9C0B9 1178 aaKnown RBP24.61■■□□□ 1.53
HLA-C-204ENST00000415537 PDP2Q9P2J9 529 aa24.61■■□□□ 1.53
HLA-C-204ENST00000415537 AMFRQ9UKV5 643 aa24.61■■□□□ 1.53
HLA-C-204ENST00000415537 TMPRSS11EQ9UL52 423 aa24.61■■□□□ 1.53
HLA-C-204ENST00000415537 AAR2Q9Y312 384 aaKnown RBP24.61■■□□□ 1.53
HLA-C-204ENST00000415537 EFCAB7A8K855 629 aa24.6■■□□□ 1.53
HLA-C-204ENST00000415537 STX7O15400 261 aaKnown RBP24.6■■□□□ 1.53
HLA-C-204ENST00000415537 KCNN4O15554 427 aa24.6■■□□□ 1.53
HLA-C-204ENST00000415537 BUD23O43709 281 aaKnown RBP24.6■■□□□ 1.53
HLA-C-204ENST00000415537 AGTP01019 485 aa24.6■■□□□ 1.53
HLA-C-204ENST00000415537 IDSP22304 550 aa24.6■■□□□ 1.53
HLA-C-204ENST00000415537 CHRNA6Q15825 494 aa24.6■■□□□ 1.53
HLA-C-204ENST00000415537 ANKRD20A2Q5SQ80 823 aa24.6■■□□□ 1.53
HLA-C-204ENST00000415537 LDLRAP1Q5SW96 308 aa24.6■■□□□ 1.53
HLA-C-204ENST00000415537 ANKRD20A1Q5TYW2 823 aa24.6■■□□□ 1.53
HLA-C-204ENST00000415537 ANKRD20A3Q5VUR7 823 aa24.6■■□□□ 1.53
HLA-C-204ENST00000415537 PCSK4Q6UW60 755 aa24.6■■□□□ 1.53
HLA-C-204ENST00000415537 ZNF547Q8IVP9 402 aa24.6■■□□□ 1.53
HLA-C-204ENST00000415537 TBC1D10AQ9BXI6 508 aa24.6■■□□□ 1.53
HLA-C-204ENST00000415537 OCIAD1Q9NX40 245 aa24.6■■□□□ 1.53
HLA-C-204ENST00000415537 SCHIP1Q9P0W5 487 aaPredicted RBP24.6■■□□□ 1.53
HLA-C-204ENST00000415537 PCDHGA3Q9Y5H0 932 aa24.6■■□□□ 1.53
HLA-C-204ENST00000415537 AHCTF1Q8WYP5 2266 aa24.6■■□□□ 1.53
HLA-C-204ENST00000415537 LILRA5A6NI73 299 aa24.59■■□□□ 1.53
HLA-C-204ENST00000415537 EFSO43281 561 aa24.59■■□□□ 1.53
HLA-C-204ENST00000415537 RPL10P27635 214 aaKnown RBP24.59■■□□□ 1.53
HLA-C-204ENST00000415537 UBE2IP63279 158 aaKnown RBP24.59■■□□□ 1.53
HLA-C-204ENST00000415537 DCAF12Q5T6F0 453 aa24.59■■□□□ 1.53
HLA-C-204ENST00000415537 DTX1Q86Y01 620 aa24.59■■□□□ 1.53
HLA-C-204ENST00000415537 PLXDC1Q8IUK5 500 aa24.59■■□□□ 1.53
HLA-C-204ENST00000415537 LRRC57Q8N9N7 239 aa24.59■■□□□ 1.53
HLA-C-204ENST00000415537 ZSCAN1Q8NBB4 408 aa24.59■■□□□ 1.53
HLA-C-204ENST00000415537 FAM118BQ9BPY3 351 aa24.59■■□□□ 1.53
HLA-C-204ENST00000415537 DDA1Q9BW61 102 aa24.59■■□□□ 1.53
HLA-C-204ENST00000415537 ASPSCR1Q9BZE9 553 aa24.59■■□□□ 1.53
HLA-C-204ENST00000415537 UCK1Q9HA47 277 aa24.59■■□□□ 1.53
HLA-C-204ENST00000415537 KLHL3Q9UH77 587 aa24.59■■□□□ 1.53
HLA-C-204ENST00000415537 SDK2Q58EX2 2172 aa24.59■■□□□ 1.53
HLA-C-204ENST00000415537 GRID2IPA4D2P6 1211 aa24.58■■□□□ 1.53
HLA-C-204ENST00000415537 C2orf81A6NN90 581 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms