RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 ZNF45Q02386 682 aa13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 SOWAHAQ2M3V2 549 aa13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 PYDC2Q56P42 97 aa13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 ZNF57Q68EA5 555 aaPredicted RBP13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 KIAA0930Q6ICG6 404 aaPredicted RBP13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 TXNDC11Q6PKC3 985 aa13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 DET1Q7L5Y6 550 aa13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 LDB1Q86U70 411 aaPredicted RBP13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 SPARTQ8N0X7 666 aa13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 DEPDC4Q8N2C3 294 aa13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 NKAPQ8N5F7 415 aaKnown RBP13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 LGALS12Q96DT0 336 aa13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 CNDP2Q96KP4 475 aaKnown RBP13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 YME1L1Q96TA2 773 aa13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 WDR70Q9NW82 654 aa13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 MKLN1Q9UL63 735 aa13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 SNX7Q9UNH6 387 aa13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 ZSCAN5BA6NJL1 495 aa13.78□□□□□ -0.2
CLTCL1-201ENST00000412649 GPR25O00155 361 aa13.78□□□□□ -0.2
CLTCL1-201ENST00000412649 PLK4O00444 970 aa13.78□□□□□ -0.2
CLTCL1-201ENST00000412649 CXCR6O00574 342 aa13.78□□□□□ -0.2
CLTCL1-201ENST00000412649 GTF2E2P29084 291 aaKnown RBP13.78□□□□□ -0.2
CLTCL1-201ENST00000412649 CTSKP43235 329 aa13.78□□□□□ -0.2
CLTCL1-201ENST00000412649 CES4AQ5XG92 561 aa13.78□□□□□ -0.2
CLTCL1-201ENST00000412649 TUBA3EQ6PEY2 450 aa13.78□□□□□ -0.2
CLTCL1-201ENST00000412649 FAM131AQ6UXB0 335 aa13.78□□□□□ -0.2
CLTCL1-201ENST00000412649 ADGRG5Q8IZF4 528 aa13.78□□□□□ -0.2
CLTCL1-201ENST00000412649 ZFP14Q9HCL3 533 aa13.78□□□□□ -0.2
CLTCL1-201ENST00000412649 SAMD4AQ9UPU9 718 aaKnown RBP13.78□□□□□ -0.2
CLTCL1-201ENST00000412649 SULT1C4O75897 302 aa13.78□□□□□ -0.2
CLTCL1-201ENST00000412649 JUNP05412 331 aaKnown RBP13.78□□□□□ -0.2
CLTCL1-201ENST00000412649 TSPAN19P0C672 248 aa13.78□□□□□ -0.2
CLTCL1-201ENST00000412649 OXTRP30559 389 aa13.78□□□□□ -0.2
CLTCL1-201ENST00000412649 PTGS2P35354 604 aa13.78□□□□□ -0.2
CLTCL1-201ENST00000412649 ATP6V1E1P36543 226 aa13.78□□□□□ -0.2
CLTCL1-201ENST00000412649 CD86P42081 329 aa13.78□□□□□ -0.2
CLTCL1-201ENST00000412649 IL18R1Q13478 541 aa13.78□□□□□ -0.2
CLTCL1-201ENST00000412649 TIGD6Q17RP2 521 aa13.78□□□□□ -0.2
CLTCL1-201ENST00000412649 UBE2UQ5VVX9 321 aa13.78□□□□□ -0.2
CLTCL1-201ENST00000412649 ZNF772Q68DY9 489 aaPredicted RBP13.78□□□□□ -0.2
CLTCL1-201ENST00000412649 SULT1C3Q6IMI6 304 aa13.78□□□□□ -0.2
CLTCL1-201ENST00000412649 TMPRSS11AQ6ZMR5 421 aa13.78□□□□□ -0.2
CLTCL1-201ENST00000412649 PRR23BQ6ZRT6 265 aa13.78□□□□□ -0.2
CLTCL1-201ENST00000412649 LRRC20Q8TCA0 184 aa13.78□□□□□ -0.2
CLTCL1-201ENST00000412649 ARNTL2Q8WYA1 636 aa13.78□□□□□ -0.2
CLTCL1-201ENST00000412649 OR52E6Q96RD3 313 aa13.78□□□□□ -0.2
CLTCL1-201ENST00000412649 ITPAQ9BY32 194 aa13.78□□□□□ -0.2
CLTCL1-201ENST00000412649 FAM124BQ9H5Z6 455 aaPredicted RBP13.78□□□□□ -0.2
CLTCL1-201ENST00000412649 SIAEQ9HAT2 523 aa13.78□□□□□ -0.2
CLTCL1-201ENST00000412649 ADPRHL2Q9NX46 363 aa13.78□□□□□ -0.2
CLTCL1-201ENST00000412649 IFRD1O00458 451 aaPredicted RBP13.78□□□□□ -0.2
CLTCL1-201ENST00000412649 SIX3O95343 332 aaPredicted RBP13.78□□□□□ -0.2
CLTCL1-201ENST00000412649 PTTG1O95997 202 aa13.78□□□□□ -0.2
CLTCL1-201ENST00000412649 HPRP00739 348 aa13.78□□□□□ -0.2
CLTCL1-201ENST00000412649 INSRRP14616 1297 aa13.78□□□□□ -0.2
CLTCL1-201ENST00000412649 DPP6P42658 865 aa13.78□□□□□ -0.2
CLTCL1-201ENST00000412649 LAPTM5Q13571 262 aa13.78□□□□□ -0.2
CLTCL1-201ENST00000412649 ACOX1Q15067 660 aa13.78□□□□□ -0.2
CLTCL1-201ENST00000412649 OXA1LQ15070 435 aa13.78□□□□□ -0.2
CLTCL1-201ENST00000412649 FBXO48Q5FWF7 155 aa13.78□□□□□ -0.2
CLTCL1-201ENST00000412649 REPS2Q8NFH8 660 aa13.78□□□□□ -0.2
CLTCL1-201ENST00000412649 BCL7BQ9BQE9 202 aa13.78□□□□□ -0.2
CLTCL1-201ENST00000412649 TESMINQ9Y4I5 508 aa13.78□□□□□ -0.2
CLTCL1-201ENST00000412649 SOBPA7XYQ1 873 aa13.78□□□□□ -0.2
CLTCL1-201ENST00000412649 A8MV72 311 aaPredicted RBP13.78□□□□□ -0.2
CLTCL1-201ENST00000412649 UROSP10746 265 aa13.78□□□□□ -0.2
CLTCL1-201ENST00000412649 CD40LGP29965 261 aa13.78□□□□□ -0.2
CLTCL1-201ENST00000412649 LEPRP48357 1165 aaKnown RBP13.78□□□□□ -0.2
CLTCL1-201ENST00000412649 IL2P60568 153 aa13.78□□□□□ -0.2
CLTCL1-201ENST00000412649 GRSF1Q12849 480 aaKnown RBP eCLIP13.78□□□□□ -0.2
CLTCL1-201ENST00000412649 SF3B4Q15427 424 aaKnown RBP eCLIP13.78□□□□□ -0.2
CLTCL1-201ENST00000412649 ZNF534Q76KX8 674 aa13.78□□□□□ -0.2
CLTCL1-201ENST00000412649 BBS7Q8IWZ6 715 aa13.78□□□□□ -0.2
CLTCL1-201ENST00000412649 PHOX2BQ99453 314 aa13.78□□□□□ -0.2
CLTCL1-201ENST00000412649 KCNS3Q9BQ31 491 aa13.78□□□□□ -0.2
CLTCL1-201ENST00000412649 FAM118AQ9NWS6 357 aa13.78□□□□□ -0.2
CLTCL1-201ENST00000412649 TCRBV5S1A1TA0A578 114 aa13.77□□□□□ -0.2
CLTCL1-201ENST00000412649 CPNE3O75131 537 aaKnown RBP13.77□□□□□ -0.2
CLTCL1-201ENST00000412649 GUCA1CO95843 209 aa13.77□□□□□ -0.2
CLTCL1-201ENST00000412649 C1QTNF8P60827 252 aa13.77□□□□□ -0.2
CLTCL1-201ENST00000412649 LRRC74AQ0VAA2 488 aa13.77□□□□□ -0.2
CLTCL1-201ENST00000412649 TJAP1Q5JTD0 557 aa13.77□□□□□ -0.2
CLTCL1-201ENST00000412649 RIOX2Q8IUF8 465 aa13.77□□□□□ -0.2
CLTCL1-201ENST00000412649 ATL1Q8WXF7 558 aa13.77□□□□□ -0.2
CLTCL1-201ENST00000412649 ENOPH1Q9UHY7 261 aa13.77□□□□□ -0.2
CLTCL1-201ENST00000412649 TNPO3Q9Y5L0 923 aaKnown RBP13.77□□□□□ -0.2
CLTCL1-201ENST00000412649 SLC1A7O00341 560 aa13.77□□□□□ -0.21
CLTCL1-201ENST00000412649 ZNF195O14628 629 aa13.77□□□□□ -0.21
CLTCL1-201ENST00000412649 ENDOD1O94919 500 aa13.77□□□□□ -0.21
CLTCL1-201ENST00000412649 MAP2K4P45985 399 aa13.77□□□□□ -0.21
CLTCL1-201ENST00000412649 NCS1P62166 190 aa13.77□□□□□ -0.21
CLTCL1-201ENST00000412649 DGKZQ13574 1117 aa13.77□□□□□ -0.21
CLTCL1-201ENST00000412649 RBM20Q5T481 1227 aaKnown RBP13.77□□□□□ -0.21
CLTCL1-201ENST00000412649 HMBOX1Q6NT76 420 aa13.77□□□□□ -0.21
CLTCL1-201ENST00000412649 HDHD2Q9H0R4 259 aa13.77□□□□□ -0.21
CLTCL1-201ENST00000412649 OLA1Q9NTK5 396 aaKnown RBP13.77□□□□□ -0.21
CLTCL1-201ENST00000412649 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.77□□□□□ -0.21
CLTCL1-201ENST00000412649 CCDC59Q9P031 241 aaKnown RBP13.77□□□□□ -0.21
CLTCL1-201ENST00000412649 MYO18AQ92614 2054 aaKnown RBP13.77□□□□□ -0.21
CLTCL1-201ENST00000412649 SEMA3DO95025 777 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms