RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 COL6A6A6NMZ7 2263 aa14.31□□□□□ -0.12
MCF2L-210ENST00000409954 ZNF462Q96JM2 2506 aa14.31□□□□□ -0.12
MCF2L-210ENST00000409954 HACD1B0YJ81 288 aa14.3□□□□□ -0.12
MCF2L-210ENST00000409954 POLR1CO15160 346 aaPredicted RBP14.3□□□□□ -0.12
MCF2L-210ENST00000409954 ANKRD34CP0C6C1 535 aa14.3□□□□□ -0.12
MCF2L-210ENST00000409954 WT1P19544 449 aaPredicted RBP14.3□□□□□ -0.12
MCF2L-210ENST00000409954 SLC19A1P41440 591 aa14.3□□□□□ -0.12
MCF2L-210ENST00000409954 WNT3AP56704 352 aa14.3□□□□□ -0.12
MCF2L-210ENST00000409954 WASHC5Q12768 1159 aa14.3□□□□□ -0.12
MCF2L-210ENST00000409954 TBX2Q13207 712 aaPredicted RBP14.3□□□□□ -0.12
MCF2L-210ENST00000409954 GTF2H3Q13889 308 aa14.3□□□□□ -0.12
MCF2L-210ENST00000409954 ZNF648Q5T619 568 aaPredicted RBP14.3□□□□□ -0.12
MCF2L-210ENST00000409954 AGAP9Q5VTM2 703 aa14.3□□□□□ -0.12
MCF2L-210ENST00000409954 KAZNQ674X7 775 aa14.3□□□□□ -0.12
MCF2L-210ENST00000409954 SPOCD1Q6ZMY3 1216 aa14.3□□□□□ -0.12
MCF2L-210ENST00000409954 CCDC170Q8IYT3 715 aa14.3□□□□□ -0.12
MCF2L-210ENST00000409954 KIAA1143Q96AT1 154 aaPredicted RBP14.3□□□□□ -0.12
MCF2L-210ENST00000409954 SLC45A3Q96JT2 553 aa14.3□□□□□ -0.12
MCF2L-210ENST00000409954 CALR3Q96L12 384 aaKnown RBP14.3□□□□□ -0.12
MCF2L-210ENST00000409954 TBC1D10AQ9BXI6 508 aa14.3□□□□□ -0.12
MCF2L-210ENST00000409954 ADNPQ9H2P0 1102 aa14.3□□□□□ -0.12
MCF2L-210ENST00000409954 ARFGAP3Q9NP61 516 aa14.3□□□□□ -0.12
MCF2L-210ENST00000409954 UBP1Q9NZI7 540 aa14.3□□□□□ -0.12
MCF2L-210ENST00000409954 SAE1Q9UBE0 346 aaPredicted RBP14.3□□□□□ -0.12
MCF2L-210ENST00000409954 HYOU1Q9Y4L1 999 aa14.3□□□□□ -0.12
MCF2L-210ENST00000409954 GCN1Q92616 2671 aaKnown RBP14.29□□□□□ -0.12
MCF2L-210ENST00000409954 ZNF891A8MT65 544 aaPredicted RBP14.29□□□□□ -0.12
MCF2L-210ENST00000409954 PDZK1P1A8MUH7 402 aa14.29□□□□□ -0.12
MCF2L-210ENST00000409954 SLC28A2O43868 658 aa14.29□□□□□ -0.12
MCF2L-210ENST00000409954 UBXN7O94888 489 aa14.29□□□□□ -0.12
MCF2L-210ENST00000409954 C9P02748 559 aa14.29□□□□□ -0.12
MCF2L-210ENST00000409954 ITGB6P18564 788 aa14.29□□□□□ -0.12
MCF2L-210ENST00000409954 CD68P34810 354 aaPredicted RBP14.29□□□□□ -0.12
MCF2L-210ENST00000409954 MAPK9P45984 424 aa14.29□□□□□ -0.12
MCF2L-210ENST00000409954 ABHD18Q0P651 414 aa14.29□□□□□ -0.12
MCF2L-210ENST00000409954 NFATC3Q12968 1075 aa14.29□□□□□ -0.12
MCF2L-210ENST00000409954 MPP3Q13368 585 aa14.29□□□□□ -0.12
MCF2L-210ENST00000409954 XRCC4Q13426 336 aa14.29□□□□□ -0.12
MCF2L-210ENST00000409954 SPA17Q15506 151 aa14.29□□□□□ -0.12
MCF2L-210ENST00000409954 BORAQ6PGQ7 559 aa14.29□□□□□ -0.12
MCF2L-210ENST00000409954 B4GALNT4Q76KP1 1039 aa14.29□□□□□ -0.12
MCF2L-210ENST00000409954 KATNAL2Q8IYT4 538 aa14.29□□□□□ -0.12
MCF2L-210ENST00000409954 GDAP1Q8TB36 358 aa14.29□□□□□ -0.12
MCF2L-210ENST00000409954 ZDHHC12Q96GR4 267 aa14.29□□□□□ -0.12
MCF2L-210ENST00000409954 RBM41Q96IZ5 413 aaKnown RBP14.29□□□□□ -0.12
MCF2L-210ENST00000409954 C9orf72Q96LT7 481 aa14.29□□□□□ -0.12
MCF2L-210ENST00000409954 FERMT1Q9BQL6 677 aa14.29□□□□□ -0.12
MCF2L-210ENST00000409954 BPIFA1Q9NP55 256 aa14.29□□□□□ -0.12
MCF2L-210ENST00000409954 SLC40A1Q9NP59 571 aa14.29□□□□□ -0.12
MCF2L-210ENST00000409954 IL26Q9NPH9 171 aa14.29□□□□□ -0.12
MCF2L-210ENST00000409954 POT1Q9NUX5 634 aa14.29□□□□□ -0.12
MCF2L-210ENST00000409954 IL17CQ9P0M4 197 aa14.29□□□□□ -0.12
MCF2L-210ENST00000409954 SCHIP1Q9P0W5 487 aaPredicted RBP14.29□□□□□ -0.12
MCF2L-210ENST00000409954 KLHL8Q9P2G9 620 aaPredicted RBP14.29□□□□□ -0.12
MCF2L-210ENST00000409954 ZNF624Q9P2J8 865 aaPredicted RBP14.29□□□□□ -0.12
MCF2L-210ENST00000409954 TMEM184BQ9Y519 407 aaPredicted RBP14.29□□□□□ -0.12
MCF2L-210ENST00000409954 SPO11Q9Y5K1 396 aa14.29□□□□□ -0.12
MCF2L-210ENST00000409954 KALRNO60229 2985 aa14.29□□□□□ -0.12
MCF2L-210ENST00000409954 PRR19A6NJB7 356 aa14.28□□□□□ -0.12
MCF2L-210ENST00000409954 AURKAO14965 403 aa14.28□□□□□ -0.12
MCF2L-210ENST00000409954 LCA5LO95447 670 aa14.28□□□□□ -0.12
MCF2L-210ENST00000409954 LIFP15018 202 aa14.28□□□□□ -0.12
MCF2L-210ENST00000409954 NFKB1P19838 968 aa14.28□□□□□ -0.12
MCF2L-210ENST00000409954 HLA-DPA1P20036 260 aa14.28□□□□□ -0.12
MCF2L-210ENST00000409954 HALP42357 657 aa14.28□□□□□ -0.12
MCF2L-210ENST00000409954 COPS2P61201 443 aa14.28□□□□□ -0.12
MCF2L-210ENST00000409954 CYP4F2P78329 520 aa14.28□□□□□ -0.12
MCF2L-210ENST00000409954 MC1RQ01726 317 aa14.28□□□□□ -0.12
MCF2L-210ENST00000409954 KCNC4Q03721 635 aa14.28□□□□□ -0.12
MCF2L-210ENST00000409954 MAP7Q14244 749 aa14.28□□□□□ -0.12
MCF2L-210ENST00000409954 IL11RAQ14626 422 aa14.28□□□□□ -0.12
MCF2L-210ENST00000409954 ATP13A5Q4VNC0 1218 aa14.28□□□□□ -0.12
MCF2L-210ENST00000409954 LDLRAP1Q5SW96 308 aa14.28□□□□□ -0.12
MCF2L-210ENST00000409954 CRTC3Q6UUV7 619 aa14.28□□□□□ -0.12
MCF2L-210ENST00000409954 KDELC1Q6UW63 502 aa14.28□□□□□ -0.12
MCF2L-210ENST00000409954 ZC3H18Q86VM9 953 aaKnown RBP14.28□□□□□ -0.12
MCF2L-210ENST00000409954 ZNF547Q8IVP9 402 aa14.28□□□□□ -0.12
MCF2L-210ENST00000409954 RNF214Q8ND24 703 aa14.28□□□□□ -0.12
MCF2L-210ENST00000409954 HTR3CQ8WXA8 447 aa14.28□□□□□ -0.12
MCF2L-210ENST00000409954 PMEPA1Q969W9 287 aa14.28□□□□□ -0.12
MCF2L-210ENST00000409954 CXorf40BQ96DE9 158 aa14.28□□□□□ -0.12
MCF2L-210ENST00000409954 ZNF514Q96K75 400 aaPredicted RBP14.28□□□□□ -0.12
MCF2L-210ENST00000409954 ZCCHC2Q9C0B9 1178 aaKnown RBP14.28□□□□□ -0.12
MCF2L-210ENST00000409954 RAB33BQ9H082 229 aa14.28□□□□□ -0.12
MCF2L-210ENST00000409954 SLC25A18Q9H1K4 315 aa14.28□□□□□ -0.12
MCF2L-210ENST00000409954 GPN2Q9H9Y4 310 aaPredicted RBP14.28□□□□□ -0.12
MCF2L-210ENST00000409954 EPHA6Q9UF33 1036 aa14.28□□□□□ -0.12
MCF2L-210ENST00000409954 KLHL3Q9UH77 587 aa14.28□□□□□ -0.12
MCF2L-210ENST00000409954 TUBD1Q9UJT1 453 aa14.28□□□□□ -0.12
MCF2L-210ENST00000409954 EFR3BQ9Y2G0 817 aa14.28□□□□□ -0.12
MCF2L-210ENST00000409954 DNAJC16Q9Y2G8 782 aa14.28□□□□□ -0.12
MCF2L-210ENST00000409954 PKP3Q9Y446 797 aa14.28□□□□□ -0.12
MCF2L-210ENST00000409954 MN1Q10571 1320 aaPredicted RBP14.27□□□□□ -0.12
MCF2L-210ENST00000409954 hCG_1818297A0A087WSY0 165 aa14.27□□□□□ -0.13
MCF2L-210ENST00000409954 KLHL33A6NCF5 533 aa14.27□□□□□ -0.13
MCF2L-210ENST00000409954 MTX2O75431 263 aa14.27□□□□□ -0.13
MCF2L-210ENST00000409954 STK17BO94768 372 aa14.27□□□□□ -0.13
MCF2L-210ENST00000409954 WISP1O95388 367 aa14.27□□□□□ -0.13
MCF2L-210ENST00000409954 SLC4A1P02730 911 aa14.27□□□□□ -0.13
MCF2L-210ENST00000409954 FAM87AP0C7U9 286 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms